Phenotype measure:   Svenson3   pctNEUT

ID, description, units MPD:27303   pctNEUT   neutrophil differential (NEUT; percentage of total WBC)   [%]
Data set, strains Svenson3   B6.PWD consomic w/par   28 strains     sex: both     age: 7wks
Procedure complete blood count
Ontology mappings

  STRAIN COMPARISON PLOT
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Svenson3 - neutrophil differential (NEUT; percentage of total WBC)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains28 strains
Mean of the strain means8.05   % 10.7   %
Median of the strain means7.54   % 8.39   %
SD of the strain means± 2.42 ± 5.85
Coefficient of variation (CV)0.301 0.547
Min–max range of strain means5.17   –   17.1   % 4.20   –   27.2   %
Mean sample size per strain8.0   mice 7.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 748.9925 748.9925 50.0071 < 0.0001
strain 27 5143.7476 190.5092 12.7195 < 0.0001
sex:strain 27 3206.619 118.7637 7.9294 < 0.0001
Residuals 380 5691.5349 14.9777


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.PWD-Chr1 f 11.4 2.27   8 0.802 0.199 8.4, 14.8 1.38
B6.PWD-Chr1 m 8.3 2.57   10 0.814 0.31 5.4, 13.0 -0.41
B6.PWD-Chr10.1 f 5.17 1.05   12 0.302 0.202 4.3, 7.6 -1.19
B6.PWD-Chr10.1 m 27.2 9.35   6 3.82 0.343 11.8, 39.1 2.82
B6.PWD-Chr10.2 f 9.0 1.62   7 0.614 0.18 7.3, 11.6 0.39
B6.PWD-Chr10.2 m 7.23 2.58   3 1.49 0.357 5.1, 10.1 -0.59
B6.PWD-Chr10.3 f 9.31 2.79   9 0.931 0.3 4.0, 14.7 0.52
B6.PWD-Chr10.3 m 8.21 1.75   8 0.618 0.213 6.3, 10.8 -0.42
B6.PWD-Chr11.1 f 8.51 2.01   9 0.671 0.237 6.2, 12.9 0.19
B6.PWD-Chr11.1 m 13.5 6.99   8 2.47 0.519 8.9, 28.3 0.48
B6.PWD-Chr11.2 f 6.94 1.24   8 0.437 0.178 5.3, 8.9 -0.46
B6.PWD-Chr11.2 m 22.2 12.6   8 4.47 0.569 7.0, 38.1 1.97
B6.PWD-Chr11.3 f 7.06 1.8   8 0.636 0.255 5.1, 10.1 -0.41
B6.PWD-Chr11.3 m 7.04 1.71   8 0.606 0.244 4.0, 8.7 -0.62
B6.PWD-Chr12 f 9.75 1.8   8 0.636 0.184 7.2, 13.1 0.7
B6.PWD-Chr12 m 9.74 2.39   8 0.844 0.245 6.1, 12.1 -0.16
B6.PWD-Chr13 f 9.11 3.51   8 1.24 0.385 5.1, 15.1 0.44
B6.PWD-Chr13 m 10.7 5.09   9 1.7 0.475 5.9, 19.5 0.0
B6.PWD-Chr14 f 8.75 1.61   8 0.568 0.184 7.3, 11.3 0.29
B6.PWD-Chr14 m 8.47 1.76   8 0.623 0.208 6.6, 12.1 -0.38
B6.PWD-Chr15 f 9.07 2.07   8 0.733 0.228 7.1, 12.3 0.42
B6.PWD-Chr15 m 9.72 1.47   8 0.52 0.151 7.8, 12.2 -0.17
B6.PWD-Chr16 f 6.44 1.2   8 0.424 0.186 4.3, 8.2 -0.67
B6.PWD-Chr16 m 6.51 1.32   8 0.467 0.203 5.3, 8.3 -0.72
B6.PWD-Chr17 f 5.91 1.56   8 0.552 0.264 3.8, 8.4 -0.88
B6.PWD-Chr17 m 6.98 1.6   8 0.565 0.229 4.5, 8.8 -0.63
B6.PWD-Chr18 f 6.78 1.92   5 0.858 0.283 4.8, 9.8 -0.52
B6.PWD-Chr18 m 5.21 0.785   9 0.262 0.151 3.9, 6.2 -0.94
B6.PWD-Chr19 f 6.69 1.13   7 0.428 0.169 4.4, 8.1 -0.56
B6.PWD-Chr19 m 6.71 1.18   8 0.419 0.177 5.3, 8.3 -0.68
B6.PWD-Chr2 f 9.9 2.02   9 0.675 0.205 7.0, 12.4 0.76
B6.PWD-Chr2 m 18.4 9.71   9 3.24 0.527 11.9, 39.2 1.32
B6.PWD-Chr3 f 8.03 1.08   8 0.38 0.134 6.6, 9.6 -0.01
B6.PWD-Chr3 m 6.96 0.742   8 0.263 0.107 6.0, 8.3 -0.64
B6.PWD-Chr5 f 8.68 1.18   8 0.417 0.136 6.4, 10.1 0.26
B6.PWD-Chr5 m 7.81 1.59   8 0.562 0.204 5.7, 10.7 -0.49
B6.PWD-Chr6 f 8.89 2.03   10 0.642 0.229 5.7, 11.3 0.35
B6.PWD-Chr6 m 9.72 1.69   8 0.597 0.174 7.3, 11.7 -0.17
B6.PWD-Chr8 f 5.75 0.919   2   0.65 0.16 5.1, 6.4 -0.95
B6.PWD-Chr8 m 4.2 0.566   2   0.4 0.135 3.8, 4.6 -1.11
B6.PWD-Chr9 f 9.97 3.29   8 1.16 0.33 6.8, 16.4 0.79
B6.PWD-Chr9 m 14.0 8.66   8 3.06 0.617 5.9, 32.5 0.56
B6.PWD-ChrX.1 f 6.09 1.37   8 0.484 0.225 4.1, 8.5 -0.81
B6.PWD-ChrX.1 m 6.93 2.08   8 0.737 0.301 4.5, 10.0 -0.64
B6.PWD-ChrX.2 f 6.85 0.586   6 0.239 0.0855 6.1, 7.6 -0.5
B6.PWD-ChrX.2 m 13.4 8.6   8 3.04 0.642 6.4, 25.5 0.46
B6.PWD-ChrX.3 f 5.98 1.46   9 0.488 0.245 3.3, 8.4 -0.86
B6.PWD-ChrX.3 m 11.6 5.07   8 1.79 0.439 7.0, 18.8 0.15
B6.PWD-ChrY f 6.83 1.74   7 0.656 0.254 4.3, 9.1 -0.5
B6.PWD-ChrY m 11.1 7.74   8 2.74 0.695 4.5, 25.9 0.07
B6.PWD-mt f 5.98 1.42   8 0.502 0.238 4.3, 8.1 -0.86
B6.PWD-mt m 6.22 1.91   8 0.677 0.308 3.6, 8.9 -0.76
C57BL/6J f 5.45 0.669   6 0.273 0.123 4.2, 6.0 -1.07
C57BL/6J m 6.68 1.69   5 0.755 0.253 4.0, 8.2 -0.69
PWD/PhJ f 17.1 3.47   12 1.0 0.203 11.4, 22.3 3.74
PWD/PhJ m 24.7 3.17   9 1.06 0.128 17.1, 27.6 2.39


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 f 11.4 1.3683 14.0904 8.7096
B6.PWD-Chr1 m 8.3 1.2238 10.7063 5.8937
B6.PWD-Chr10.1 f 5.175 1.1172 7.3717 2.9783
B6.PWD-Chr10.1 m 27.25 1.58 30.3566 24.1434
B6.PWD-Chr10.2 f 9.0 1.4628 11.8761 6.1239
B6.PWD-Chr10.2 m 7.2333 2.2344 11.6267 2.84
B6.PWD-Chr10.3 f 9.3111 1.29 11.8476 6.7746
B6.PWD-Chr10.3 m 8.2125 1.3683 10.9029 5.5221
B6.PWD-Chr11.1 f 8.5111 1.29 11.0476 5.9746
B6.PWD-Chr11.1 m 13.475 1.3683 16.1654 10.7846
B6.PWD-Chr11.2 f 6.9375 1.3683 9.6279 4.2471
B6.PWD-Chr11.2 m 22.2125 1.3683 24.9029 19.5221
B6.PWD-Chr11.3 f 7.0625 1.3683 9.7529 4.3721
B6.PWD-Chr11.3 m 7.0375 1.3683 9.7279 4.3471
B6.PWD-Chr12 f 9.75 1.3683 12.4404 7.0596
B6.PWD-Chr12 m 9.7375 1.3683 12.4279 7.0471
B6.PWD-Chr13 f 9.1125 1.3683 11.8029 6.4221
B6.PWD-Chr13 m 10.7222 1.29 13.2587 8.1857
B6.PWD-Chr14 f 8.75 1.3683 11.4404 6.0596
B6.PWD-Chr14 m 8.475 1.3683 11.1654 5.7846
B6.PWD-Chr15 f 9.075 1.3683 11.7654 6.3846
B6.PWD-Chr15 m 9.725 1.3683 12.4154 7.0346
B6.PWD-Chr16 f 6.4375 1.3683 9.1279 3.7471
B6.PWD-Chr16 m 6.5125 1.3683 9.2029 3.8221
B6.PWD-Chr17 f 5.9125 1.3683 8.6029 3.2221
B6.PWD-Chr17 m 6.975 1.3683 9.6654 4.2846
B6.PWD-Chr18 f 6.78 1.7308 10.1831 3.3769
B6.PWD-Chr18 m 5.2111 1.29 7.7476 2.6746
B6.PWD-Chr19 f 6.6857 1.4628 9.5618 3.8096
B6.PWD-Chr19 m 6.7125 1.3683 9.4029 4.0221
B6.PWD-Chr2 f 9.9 1.29 12.4365 7.3635
B6.PWD-Chr2 m 18.4444 1.29 20.9809 15.9079
B6.PWD-Chr3 f 8.025 1.3683 10.7154 5.3346
B6.PWD-Chr3 m 6.9625 1.3683 9.6529 4.2721
B6.PWD-Chr5 f 8.675 1.3683 11.3654 5.9846
B6.PWD-Chr5 m 7.8125 1.3683 10.5029 5.1221
B6.PWD-Chr6 f 8.89 1.2238 11.2963 6.4837
B6.PWD-Chr6 m 9.725 1.3683 12.4154 7.0346
B6.PWD-Chr8 f 5.75 2.7366 11.1307 0.3693
B6.PWD-Chr8 m 4.2 2.7366 9.5807 0.0
B6.PWD-Chr9 f 9.975 1.3683 12.6654 7.2846
B6.PWD-Chr9 m 14.0375 1.3683 16.7279 11.3471
B6.PWD-ChrX.1 f 6.0875 1.3683 8.7779 3.3971
B6.PWD-ChrX.1 m 6.925 1.3683 9.6154 4.2346
B6.PWD-ChrX.2 f 6.85 1.58 9.9566 3.7434
B6.PWD-ChrX.2 m 13.4 1.3683 16.0904 10.7096
B6.PWD-ChrX.3 f 5.9778 1.29 8.5143 3.4413
B6.PWD-ChrX.3 m 11.5625 1.3683 14.2529 8.8721
B6.PWD-ChrY f 6.8286 1.4628 9.7047 3.9524
B6.PWD-ChrY m 11.1375 1.3683 13.8279 8.4471
B6.PWD-mt f 5.975 1.3683 8.6654 3.2846
B6.PWD-mt m 6.225 1.3683 8.9154 3.5346
C57BL/6J f 5.45 1.58 8.5566 2.3434
C57BL/6J m 6.68 1.7308 10.0831 3.2769
PWD/PhJ f 17.0917 1.1172 19.2883 14.895
PWD/PhJ m 24.6667 1.29 27.2032 22.1302


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 both 9.85 0.9179 11.6548 8.0452
B6.PWD-Chr10.1 both 16.2125 0.9675 18.1149 14.3101
B6.PWD-Chr10.2 both 8.1167 1.3353 10.7422 5.4911
B6.PWD-Chr10.3 both 8.7618 0.9403 10.6106 6.913
B6.PWD-Chr11.1 both 10.9931 0.9403 12.8418 9.1443
B6.PWD-Chr11.2 both 14.575 0.9675 16.4774 12.6726
B6.PWD-Chr11.3 both 7.05 0.9675 8.9524 5.1476
B6.PWD-Chr12 both 9.7437 0.9675 11.6461 7.8414
B6.PWD-Chr13 both 9.9174 0.9403 11.7661 8.0686
B6.PWD-Chr14 both 8.6125 0.9675 10.5149 6.7101
B6.PWD-Chr15 both 9.4 0.9675 11.3024 7.4976
B6.PWD-Chr16 both 6.475 0.9675 8.3774 4.5726
B6.PWD-Chr17 both 6.4438 0.9675 8.3461 4.5414
B6.PWD-Chr18 both 5.9956 1.0793 8.1177 3.8734
B6.PWD-Chr19 both 6.6991 1.0015 8.6683 4.73
B6.PWD-Chr2 both 14.1722 0.9122 15.9658 12.3786
B6.PWD-Chr3 both 7.4938 0.9675 9.3961 5.5914
B6.PWD-Chr5 both 8.2437 0.9675 10.1461 6.3414
B6.PWD-Chr6 both 9.3075 0.9179 11.1123 7.5027
B6.PWD-Chr8 both 4.975 1.9351 8.7798 1.1702
B6.PWD-Chr9 both 12.0062 0.9675 13.9086 10.1039
B6.PWD-ChrX.1 both 6.5062 0.9675 8.4086 4.6039
B6.PWD-ChrX.2 both 10.125 1.045 12.1798 8.0702
B6.PWD-ChrX.3 both 8.7701 0.9403 10.6189 6.9214
B6.PWD-ChrY both 8.983 1.0015 10.9522 7.0139
B6.PWD-mt both 6.1 0.9675 8.0024 4.1976
C57BL/6J both 6.065 1.1717 8.3689 3.7611
PWD/PhJ both 20.8792 0.8533 22.5569 19.2014




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA