Phenotype measure:   Svenson3   WBC

ID, description, units MPD:27301   WBC   white blood cell count (WBC; per volume x 103)   [n/µL]
Data set, strains Svenson3   B6.PWD consomic w/par   28 strains     sex: both     age: 7wks
Procedure complete blood count
Ontology mappings

  STRAIN COMPARISON PLOT
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Svenson3 - white blood cell count (WBC; per volume x 103)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains28 strains
Mean of the strain means8.81   n/µL 9.12   n/µL
Median of the strain means8.93   n/µL 8.73   n/µL
SD of the strain means± 2.03 ± 2.21
Coefficient of variation (CV)0.230 0.242
Min–max range of strain means4.09   –   13.5   n/µL 2.71   –   13.8   n/µL
Mean sample size per strain8.0   mice 7.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 14.6596 14.6596 4.9807 0.0262
strain 27 1793.3958 66.4221 22.5674 < 0.0001
sex:strain 27 331.9323 12.2938 4.1769 < 0.0001
Residuals 381 1121.3895 2.9433


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.PWD-Chr1 f 8.11 1.82   8 0.642 0.224 6.21, 11.1 -0.34
B6.PWD-Chr1 m 8.36 1.3   10 0.412 0.156 6.61, 11.0 -0.34
B6.PWD-Chr10.1 f 13.5 1.84   11 0.556 0.137 9.87, 17.1 2.31
B6.PWD-Chr10.1 m 8.74 1.25   6 0.511 0.143 6.75, 10.7 -0.17
B6.PWD-Chr10.2 f 7.05 1.4   7 0.528 0.198 5.41, 9.67 -0.87
B6.PWD-Chr10.2 m 8.36 1.67   3 0.961 0.199 6.44, 9.45 -0.34
B6.PWD-Chr10.3 f 5.6 1.8   10 0.568 0.321 2.73, 8.69 -1.58
B6.PWD-Chr10.3 m 7.66 1.37   8 0.486 0.179 5.17, 9.7 -0.66
B6.PWD-Chr11.1 f 8.9 2.48   9 0.828 0.279 4.82, 13.8 0.05
B6.PWD-Chr11.1 m 8.27 1.06   8 0.374 0.128 6.14, 9.88 -0.39
B6.PWD-Chr11.2 f 7.05 2.01   8 0.711 0.285 4.47, 10.4 -0.87
B6.PWD-Chr11.2 m 7.48 2.15   8 0.761 0.288 3.38, 9.99 -0.74
B6.PWD-Chr11.3 f 10.4 2.07   8 0.731 0.198 7.64, 14.5 0.78
B6.PWD-Chr11.3 m 11.2 2.31   8 0.815 0.206 7.78, 13.8 0.94
B6.PWD-Chr12 f 7.96 1.17   8 0.415 0.147 6.5, 9.85 -0.42
B6.PWD-Chr12 m 7.99 1.52   8 0.537 0.19 5.97, 10.2 -0.51
B6.PWD-Chr13 f 10.4 2.18   8 0.771 0.21 6.85, 13.8 0.78
B6.PWD-Chr13 m 12.1 1.71   9 0.57 0.142 9.54, 14.9 1.35
B6.PWD-Chr14 f 10.6 1.28   8 0.453 0.121 8.44, 12.3 0.88
B6.PWD-Chr14 m 13.8 2.16   8 0.762 0.156 10.8, 17.0 2.12
B6.PWD-Chr15 f 9.9 1.52   8 0.538 0.154 7.89, 12.0 0.54
B6.PWD-Chr15 m 8.01 1.59   8 0.563 0.199 5.57, 10.4 -0.5
B6.PWD-Chr16 f 10.6 1.68   8 0.593 0.159 7.84, 13.3 0.88
B6.PWD-Chr16 m 9.97 1.69   8 0.597 0.169 7.62, 13.2 0.38
B6.PWD-Chr17 f 12.4 2.72   8 0.96 0.219 9.48, 16.3 1.77
B6.PWD-Chr17 m 10.8 1.44   8 0.509 0.133 8.96, 13.4 0.76
B6.PWD-Chr18 f 8.47 1.2   5 0.539 0.142 7.66, 10.6 -0.17
B6.PWD-Chr18 m 9.9 1.5   9 0.5 0.152 7.76, 12.1 0.35
B6.PWD-Chr19 f 6.78 0.878   7 0.332 0.129 5.46, 8.16 -1.0
B6.PWD-Chr19 m 10.5 1.63   8 0.577 0.156 8.46, 13.3 0.62
B6.PWD-Chr2 f 8.96 1.54   9 0.513 0.172 6.74, 11.1 0.07
B6.PWD-Chr2 m 8.34 1.2   10 0.379 0.144 6.03, 10.5 -0.35
B6.PWD-Chr3 f 11.2 1.53   8 0.542 0.137 8.73, 13.9 1.18
B6.PWD-Chr3 m 13.0 1.89   8 0.669 0.146 10.2, 15.6 1.76
B6.PWD-Chr5 f 6.04 1.55   8 0.549 0.257 4.36, 8.27 -1.37
B6.PWD-Chr5 m 6.66 1.42   8 0.502 0.213 4.98, 9.41 -1.11
B6.PWD-Chr6 f 7.06 1.23   10 0.388 0.174 5.2, 9.16 -0.86
B6.PWD-Chr6 m 7.57 1.99   8 0.703 0.263 6.17, 12.4 -0.7
B6.PWD-Chr8 f 9.18 0.184   2   0.13 0.02 9.05, 9.31 0.18
B6.PWD-Chr8 m 7.72 0.474   2   0.335 0.0613 7.39, 8.06 -0.63
B6.PWD-Chr9 f 7.73 2.45   8 0.865 0.316 4.76, 10.9 -0.53
B6.PWD-Chr9 m 10.3 2.13   8 0.752 0.207 7.19, 13.8 0.53
B6.PWD-ChrX.1 f 9.02 1.68   8 0.596 0.187 6.47, 11.5 0.1
B6.PWD-ChrX.1 m 9.64 0.663   8 0.234 0.0688 8.75, 10.5 0.23
B6.PWD-ChrX.2 f 8.61 1.39   6 0.569 0.162 6.32, 10.3 -0.1
B6.PWD-ChrX.2 m 6.83 2.3   8 0.815 0.337 2.44, 10.2 -1.04
B6.PWD-ChrX.3 f 9.73 1.51   9 0.504 0.156 6.99, 11.3 0.45
B6.PWD-ChrX.3 m 8.99 3.01   8 1.06 0.334 2.2, 11.4 -0.06
B6.PWD-ChrY f 9.19 0.951   7 0.359 0.103 8.05, 10.8 0.19
B6.PWD-ChrY m 8.71 1.14   8 0.402 0.131 6.78, 10.3 -0.19
B6.PWD-mt f 8.67 1.66   8 0.586 0.191 5.81, 11.2 -0.07
B6.PWD-mt m 10.3 1.48   8 0.523 0.143 9.0, 13.8 0.53
C57BL/6J f 9.44 1.29   6 0.525 0.136 7.94, 11.1 0.31
C57BL/6J m 11.5 1.05   5 0.469 0.091 10.3, 13.0 1.08
PWD/PhJ f 4.09 2.0   12 0.577 0.488 1.97, 7.85 -2.33
PWD/PhJ m 2.71 0.92   9 0.307 0.34 1.84, 4.58 -2.9


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 f 8.1112 0.6066 9.3039 6.9186
B6.PWD-Chr1 m 8.355 0.5425 9.4217 7.2883
B6.PWD-Chr10.1 f 13.4755 0.5173 14.4925 12.4584
B6.PWD-Chr10.1 m 8.7383 0.7004 10.1154 7.3612
B6.PWD-Chr10.2 f 7.0486 0.6484 8.3235 5.7736
B6.PWD-Chr10.2 m 8.3567 0.9905 10.3042 6.4091
B6.PWD-Chr10.3 f 5.602 0.5425 6.6687 4.5353
B6.PWD-Chr10.3 m 7.6612 0.6066 8.8539 6.4686
B6.PWD-Chr11.1 f 8.9033 0.5719 10.0277 7.7789
B6.PWD-Chr11.1 m 8.265 0.6066 9.4576 7.0724
B6.PWD-Chr11.2 f 7.0525 0.6066 8.2451 5.8599
B6.PWD-Chr11.2 m 7.4787 0.6066 8.6714 6.2861
B6.PWD-Chr11.3 f 10.425 0.6066 11.6176 9.2324
B6.PWD-Chr11.3 m 11.1962 0.6066 12.3889 10.0036
B6.PWD-Chr12 f 7.9587 0.6066 9.1514 6.7661
B6.PWD-Chr12 m 7.9862 0.6066 9.1789 6.7936
B6.PWD-Chr13 f 10.3625 0.6066 11.5551 9.1699
B6.PWD-Chr13 m 12.0789 0.5719 13.2033 10.9545
B6.PWD-Chr14 f 10.6388 0.6066 11.8314 9.4461
B6.PWD-Chr14 m 13.7788 0.6066 14.9714 12.5861
B6.PWD-Chr15 f 9.8987 0.6066 11.0914 8.7061
B6.PWD-Chr15 m 8.0137 0.6066 9.2064 6.8211
B6.PWD-Chr16 f 10.575 0.6066 11.7676 9.3824
B6.PWD-Chr16 m 9.9725 0.6066 11.1651 8.7799
B6.PWD-Chr17 f 12.3813 0.6066 13.5739 11.1886
B6.PWD-Chr17 m 10.82 0.6066 12.0126 9.6274
B6.PWD-Chr18 f 8.474 0.7672 9.9826 6.9654
B6.PWD-Chr18 m 9.9022 0.5719 11.0266 8.7778
B6.PWD-Chr19 f 6.7843 0.6484 8.0592 5.5093
B6.PWD-Chr19 m 10.465 0.6066 11.6576 9.2724
B6.PWD-Chr2 f 8.9567 0.5719 10.0811 7.8323
B6.PWD-Chr2 m 8.344 0.5425 9.4107 7.2773
B6.PWD-Chr3 f 11.1662 0.6066 12.3589 9.9736
B6.PWD-Chr3 m 12.955 0.6066 14.1476 11.7624
B6.PWD-Chr5 f 6.0387 0.6066 7.2314 4.8461
B6.PWD-Chr5 m 6.6587 0.6066 7.8514 5.4661
B6.PWD-Chr6 f 7.057 0.5425 8.1237 5.9903
B6.PWD-Chr6 m 7.57 0.6066 8.7626 6.3774
B6.PWD-Chr8 f 9.18 1.2131 11.5652 6.7948
B6.PWD-Chr8 m 7.725 1.2131 10.1102 5.3398
B6.PWD-Chr9 f 7.7312 0.6066 8.9239 6.5386
B6.PWD-Chr9 m 10.2525 0.6066 11.4451 9.0599
B6.PWD-ChrX.1 f 9.0212 0.6066 10.2139 7.8286
B6.PWD-ChrX.1 m 9.64 0.6066 10.8326 8.4474
B6.PWD-ChrX.2 f 8.61 0.7004 9.9871 7.2329
B6.PWD-ChrX.2 m 6.8325 0.6066 8.0251 5.6399
B6.PWD-ChrX.3 f 9.7267 0.5719 10.8511 8.6023
B6.PWD-ChrX.3 m 8.9887 0.6066 10.1814 7.7961
B6.PWD-ChrY f 9.1929 0.6484 10.4678 7.9179
B6.PWD-ChrY m 8.7075 0.6066 9.9001 7.5149
B6.PWD-mt f 8.6737 0.6066 9.8664 7.4811
B6.PWD-mt m 10.3237 0.6066 11.5164 9.1311
C57BL/6J f 9.4383 0.7004 10.8154 8.0612
C57BL/6J m 11.512 0.7672 13.0206 10.0034
PWD/PhJ f 4.095 0.4953 5.0688 3.1212
PWD/PhJ m 2.7078 0.5719 3.8322 1.5834


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 both 8.2331 0.4069 9.0332 7.4331
B6.PWD-Chr10.1 both 11.1069 0.4353 11.9629 10.2509
B6.PWD-Chr10.2 both 7.7026 0.5919 8.8665 6.5387
B6.PWD-Chr10.3 both 6.6316 0.4069 7.4317 5.8316
B6.PWD-Chr11.1 both 8.5842 0.4168 9.4037 7.7646
B6.PWD-Chr11.2 both 7.2656 0.4289 8.1089 6.4223
B6.PWD-Chr11.3 both 10.8106 0.4289 11.6539 9.9673
B6.PWD-Chr12 both 7.9725 0.4289 8.8158 7.1292
B6.PWD-Chr13 both 11.2207 0.4168 12.0402 10.4011
B6.PWD-Chr14 both 12.2088 0.4289 13.0521 11.3654
B6.PWD-Chr15 both 8.9562 0.4289 9.7996 8.1129
B6.PWD-Chr16 both 10.2737 0.4289 11.1171 9.4304
B6.PWD-Chr17 both 11.6006 0.4289 12.4439 10.7573
B6.PWD-Chr18 both 9.1881 0.4785 10.1289 8.2474
B6.PWD-Chr19 both 8.6246 0.444 9.4975 7.7517
B6.PWD-Chr2 both 8.6503 0.3941 9.4253 7.8754
B6.PWD-Chr3 both 12.0606 0.4289 12.9039 11.2173
B6.PWD-Chr5 both 6.3487 0.4289 7.1921 5.5054
B6.PWD-Chr6 both 7.3135 0.4069 8.1135 6.5135
B6.PWD-Chr8 both 8.4525 0.8578 10.1391 6.7659
B6.PWD-Chr9 both 8.9919 0.4289 9.8352 8.1486
B6.PWD-ChrX.1 both 9.3306 0.4289 10.1739 8.4873
B6.PWD-ChrX.2 both 7.7212 0.4633 8.6321 6.8104
B6.PWD-ChrX.3 both 9.3577 0.4168 10.1773 8.5382
B6.PWD-ChrY both 8.9502 0.444 9.8231 8.0773
B6.PWD-mt both 9.4987 0.4289 10.3421 8.6554
C57BL/6J both 10.4752 0.5194 11.4965 9.4539
PWD/PhJ both 3.4014 0.3783 4.1451 2.6577




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA