Phenotype measure:   Hawes1   optic_cup

ID, description, units MPD:26722   optic_cup   optic cup, changes   [frequency rate]
Data set, strains Hawes1   inbred w/CC7   40 strains     sex: both     age: 6-7wks
Procedure ophthalmoscopy
Availability note:Individual animal data were not submitted. Some functionality not available.
Ontology mappings

  STRAIN COMPARISON PLOT
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Hawes1 - optic cup, changes



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested40 strains40 strains
Mean of the strain means0.0250   frequency rate 0.0195   frequency rate
Median of the strain means0   frequency rate 0   frequency rate
SD of the strain means± 0.158 ± 0.123
Coefficient of variation (CV)6.32 6.32
Min–max range of strain means0   –   1.00   frequency rate 0   –   0.780   frequency rate
Mean sample size per strain9.9   mice 9.9   mice


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.0 None   10 None None -0.16
129S1/SvImJ m 0.0 None   10 None None -0.16
129X1/SvJ f 0.0 None   10 None None -0.16
129X1/SvJ m 0.0 None   10 None None -0.16
A/J f 0.0 None   10 None None -0.16
A/J m 0.0 None   10 None None -0.16
AKR/J f 0.0 None   10 None None -0.16
AKR/J m 0.0 None   10 None None -0.16
BALB/cJ f 0.0 None   10 None None -0.16
BALB/cJ m 0.0 None   10 None None -0.16
BTBR T+ Itpr3tf/J f 0.0 None   10 None None -0.16
BTBR T+ Itpr3tf/J m 0.0 None   10 None None -0.16
BUB/BnJ f 0.0 None   10 None None -0.16
BUB/BnJ m 0.0 None   10 None None -0.16
C3H/HeJ f 0.0 None   10 None None -0.16
C3H/HeJ m 0.0 None   10 None None -0.16
C57BL/10J f 0.0 None   10 None None -0.16
C57BL/10J m 0.0 None   10 None None -0.16
C57BL/6J f 0.0 None   10 None None -0.16
C57BL/6J m 0.0 None   10 None None -0.16
C57BLKS/J f 0.0 None   10 None None -0.16
C57BLKS/J m 0.0 None   10 None None -0.16
C57BR/cdJ f 0.0 None   10 None None -0.16
C57BR/cdJ m 0.0 None   10 None None -0.16
C57L/J f 0.0 None   9 None None -0.16
C57L/J m 0.0 None   10 None None -0.16
C58/J f 0.0 None   10 None None -0.16
C58/J m 0.0 None   10 None None -0.16
CAST/EiJ f 0.0 None   10 None None -0.16
CAST/EiJ m 0.0 None   10 None None -0.16
CBA/J f 0.0 None   10 None None -0.16
CBA/J m 0.0 None   10 None None -0.16
CE/J f 0.0 None   10 None None -0.16
CE/J m 0.0 None   10 None None -0.16
CZECHII/EiJ f 0.0 None   8 None None -0.16
CZECHII/EiJ m 0.0 None   10 None None -0.16
DBA/2J f 0.0 None   10 None None -0.16
DBA/2J m 0.0 None   10 None None -0.16
FVB/NJ f 0.0 None   10 None None -0.16
FVB/NJ m 0.0 None   10 None None -0.16
I/LnJ f 0.0 None   10 None None -0.16
I/LnJ m 0.0 None   10 None None -0.16
JF1/MsJ f 0.0 None   10 None None -0.16
JF1/MsJ m 0.0 None   10 None None -0.16
KK/HlJ f 0.0 None   10 None None -0.16
KK/HlJ m 0.0 None   10 None None -0.16
LP/J f 0.0 None   10 None None -0.16
LP/J m 0.0 None   10 None None -0.16
MA/MyJ f 0.0 None   10 None None -0.16
MA/MyJ m 0.0 None   10 None None -0.16
MOLF/EiJ f 0.0 None   10 None None -0.16
MOLF/EiJ m 0.0 None   10 None None -0.16
MSM/MsJ f 0.0 None   9 None None -0.16
MSM/MsJ m 0.0 None   9 None None -0.16
NOD/ShiLtJ f 0.0 None   10 None None -0.16
NOD/ShiLtJ m 0.0 None   10 None None -0.16
NON/ShiLtJ f 0.0 None   10 None None -0.16
NON/ShiLtJ m 0.0 None   10 None None -0.16
NZB/BlNJ f 0.0 None   10 None None -0.16
NZB/BlNJ m 0.0 None   10 None None -0.16
NZW/LacJ f 0.0 None   10 None None -0.16
NZW/LacJ m 0.0 None   10 None None -0.16
PERA/EiJ f 0.0 None   10 None None -0.16
PERA/EiJ m 0.0 None   10 None None -0.16
PL/J f 0.0 None   10 None None -0.16
PL/J m 0.0 None   10 None None -0.16
PWK/PhJ f 0.0 None   8 None None -0.16
PWK/PhJ m 0.0 None   9 None None -0.16
SEA/GnJ f 1.0 None   10 None None 6.17
SEA/GnJ m 0.78 None   9 None None 6.17
SJL/J f 0.0 None   10 None None -0.16
SJL/J m 0.0 None   10 None None -0.16
SM/J f 0.0 None   10 None None -0.16
SM/J m 0.0 None   10 None None -0.16
SPRET/EiJ f 0.0 None   10 None None -0.16
SPRET/EiJ m 0.0 None   10 None None -0.16
SWR/J f 0.0 None   10 None None -0.16
SWR/J m 0.0 None   10 None None -0.16
WSB/EiJ f 0.0 None   10 None None -0.16
WSB/EiJ m 0.0 None   8 None None -0.16


GWAS analysis not available: Individual animal data not submitted