Project measure / variable:   Mills1   all_apoptotic_M12

ID, description, units MPD:25218   all_apoptotic_M12   all apoptotic splenocytes   [%]  at age 12mo  
Data set, strains Mills1   inbred   29 strains     sex: both     age: 52wks
Procedure apoptosis assessment
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Mills1 - all apoptotic splenocytes at age 12mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested27 strains27 strains
Mean of the strain means7.86   % 7.43   %
Median of the strain means7.47   % 7.47   %
SD of the strain means± 1.80 ± 1.45
Coefficient of variation (CV)0.229 0.196
Min–max range of strain means5.62   –   12.2   % 4.60   –   9.87   %
Mean sample size per strain3.3   mice 3.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 2.5354 2.5354 0.9012 0.3443
strain 23 313.8232 13.6445 4.8502 < 0.0001
sex:strain 23 109.6597 4.7678 1.6948 0.0352
Residuals 125 351.6448 2.8132


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 6.37 1.44   3 0.833 0.227 4.7, 7.2 -0.83
129S1/SvImJ m 8.92 1.42   6 0.579 0.159 7.5, 11.1 1.02
A/J m 7.97 1.76   3 1.02 0.221 6.9, 10.0 0.37
AKR/J f 12.2 2.61   3 1.51 0.214 9.3, 14.4 2.41
AKR/J m 9.27 4.38   3 2.53 0.473 4.3, 12.6 1.26
BALB/cByJ f 6.13 0.971   3 0.561 0.158 5.3, 7.2 -0.96
BALB/cByJ m 6.87 1.79   3 1.03 0.261 4.8, 8.0 -0.39
BTBR T+ Itpr3tf/J f 7.47 3.98   3 2.3 0.533 4.2, 11.9 -0.22
BTBR T+ Itpr3tf/J m 7.4 2.16   5 0.966 0.292 5.9, 11.2 -0.02
BUB/BnJ f 6.88 1.23   6 0.5 0.178 5.4, 8.2 -0.54
BUB/BnJ m 8.9 0.283   2   0.2 0.0318 8.7, 9.1 1.01
C3H/HeJ f 6.7 0.954   3 0.551 0.142 6.1, 7.8 -0.64
C3H/HeJ m 5.55 0.212   2   0.15 0.0382 5.4, 5.7 -1.29
C57BL/10J f 8.4 1.51   6 0.618 0.18 6.7, 10.5 0.3
C57BL/10J m 8.16 1.72   5 0.769 0.211 5.5, 9.9 0.5
C57BL/6J f 6.17 0.503   3 0.291 0.0816 5.7, 6.7 -0.94
C57BL/6J m 5.67 0.153   3 0.0882 0.027 5.5, 5.8 -1.21
C57BLKS/J f 5.67 0.479   4 0.239 0.0844 5.0, 6.1 -1.22
C57BLKS/J m 6.77 0.153   3 0.0882 0.0226 6.6, 6.9 -0.46
C57BR/cdJ f 6.0 0.3   3 0.173 0.05 5.7, 6.3 -1.03
C57BR/cdJ m 5.07 0.85   3 0.491 0.168 4.1, 5.7 -1.62
C57L/J f 8.93 1.48   3 0.857 0.166 7.3, 10.2 0.59
C57L/J m 6.47 0.569   3 0.328 0.0879 6.0, 7.1 -0.66
CBA/J f 7.6 1.21   3 0.7 0.16 6.5, 8.9 -0.14
CBA/J m 6.6 0.794   3 0.458 0.12 6.0, 7.5 -0.57
DBA/2J f 8.7 2.46   3 1.42 0.282 5.9, 10.5 0.47
DBA/2J m 9.87 2.77   6 1.13 0.28 7.5, 15.2 1.68
FVB/NJ f 10.2 0.458   3 0.265 0.0449 9.7, 10.6 1.3
FVB/NJ m 7.23 1.5   3 0.865 0.207 6.0, 8.9 -0.14
KK/HlJ f 7.9 0.265   3 0.153 0.0335 7.7, 8.2 0.02
KK/HlJ m 9.13 0.451   3 0.26 0.0494 8.7, 9.6 1.17
LP/J f 5.8 0.693   3 0.4 0.119 5.4, 6.6 -1.14
LP/J m 6.98 0.875   6 0.357 0.125 5.8, 8.3 -0.31
MRL/MpJ f 5.62 1.39   4 0.694 0.247 3.9, 7.1 -1.24
MRL/MpJ m 4.6 0.587   5 0.263 0.128 3.8, 5.3 -1.95
NOD.B10Sn-H2b/J f 11.1 2.17   3 1.25 0.195 8.6, 12.4 1.8
NOD.B10Sn-H2b/J m 6.9 0.361   3 0.208 0.0523 6.5, 7.2 -0.37
NON/ShiLtJ f 9.23 0.586   3 0.338 0.0635 8.8, 9.9 0.76
NON/ShiLtJ m 9.07 1.6   3 0.924 0.177 7.5, 10.7 1.13
NZO/HlLtJ f 11.1 0.961   3 0.555 0.0863 10.1, 12.0 1.8
NZO/HlLtJ m 8.6 0.0   1   0.0 0.0 8.6, 8.6 0.8
NZW/LacJ f 7.0 0.7   3 0.404 0.1 6.3, 7.7 -0.48
NZW/LacJ m 7.63 2.06   3 1.19 0.27 5.7, 9.8 0.14
P/J m 7.47 1.53   3 0.884 0.205 6.3, 9.2 0.03
PL/J f 7.77 2.8   4 1.4 0.36 5.4, 11.8 -0.05
PL/J m 4.9 0.1   3 0.0577 0.0204 4.8, 5.0 -1.74
PWD/PhJ f 6.5 1.65   3 0.954 0.254 4.9, 8.2 -0.75
RIIIS/J f 7.37 1.22   3 0.706 0.166 6.3, 8.7 -0.27
RIIIS/J m 7.68 0.873   6 0.356 0.114 6.6, 8.9 0.17
SJL/J f 8.13 1.12   3 0.644 0.137 7.3, 9.4 0.15
SM/J f 9.83 2.75   3 1.59 0.28 7.1, 12.6 1.09
SM/J m 9.4 1.61   3 0.929 0.171 7.9, 11.1 1.35
WSB/EiJ f 7.44 1.11   5 0.495 0.149 6.7, 9.4 -0.23
WSB/EiJ m 7.6 2.9   5 1.3 0.382 3.1, 11.1 0.12


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 6.3667 0.9684 8.2832 4.4502
129S1/SvImJ m 8.9167 0.6847 10.2718 7.5615
AKR/J f 12.1667 0.9684 14.0832 10.2502
AKR/J m 9.2667 0.9684 11.1832 7.3502
BALB/cByJ f 6.1333 0.9684 8.0498 4.2168
BALB/cByJ m 6.8667 0.9684 8.7832 4.9502
BTBR T+ Itpr3tf/J f 7.4667 0.9684 9.3832 5.5502
BTBR T+ Itpr3tf/J m 7.4 0.7501 8.8845 5.9155
BUB/BnJ f 6.8833 0.6847 8.2385 5.5282
BUB/BnJ m 8.9 1.186 11.2472 6.5528
C3H/HeJ f 6.7 0.9684 8.6165 4.7835
C3H/HeJ m 5.55 1.186 7.8972 3.2028
C57BL/10J f 8.4 0.6847 9.7552 7.0448
C57BL/10J m 8.16 0.7501 9.6445 6.6755
C57BL/6J f 6.1667 0.9684 8.0832 4.2502
C57BL/6J m 5.6667 0.9684 7.5832 3.7502
C57BLKS/J f 5.675 0.8386 7.3347 4.0153
C57BLKS/J m 6.7667 0.9684 8.6832 4.8502
C57BR/cdJ f 6.0 0.9684 7.9165 4.0835
C57BR/cdJ m 5.0667 0.9684 6.9832 3.1502
C57L/J f 8.9333 0.9684 10.8498 7.0168
C57L/J m 6.4667 0.9684 8.3832 4.5502
CBA/J f 7.6 0.9684 9.5165 5.6835
CBA/J m 6.6 0.9684 8.5165 4.6835
DBA/2J f 8.7 0.9684 10.6165 6.7835
DBA/2J m 9.8667 0.6847 11.2218 8.5115
FVB/NJ f 10.2 0.9684 12.1165 8.2835
FVB/NJ m 7.2333 0.9684 9.1498 5.3168
KK/HlJ f 7.9 0.9684 9.8165 5.9835
KK/HlJ m 9.1333 0.9684 11.0498 7.2168
LP/J f 5.8 0.9684 7.7165 3.8835
LP/J m 6.9833 0.6847 8.3385 5.6282
MRL/MpJ f 5.625 0.8386 7.2847 3.9653
MRL/MpJ m 4.6 0.7501 6.0845 3.1155
NOD.B10Sn-H2b/J f 11.1 0.9684 13.0165 9.1835
NOD.B10Sn-H2b/J m 6.9 0.9684 8.8165 4.9835
NON/ShiLtJ f 9.2333 0.9684 11.1498 7.3168
NON/ShiLtJ m 9.0667 0.9684 10.9832 7.1502
NZW/LacJ f 7.0 0.9684 8.9165 5.0835
NZW/LacJ m 7.6333 0.9684 9.5498 5.7168
PL/J f 7.775 0.8386 9.4347 6.1153
PL/J m 4.9 0.9684 6.8165 2.9835
RIIIS/J f 7.3667 0.9684 9.2832 5.4502
RIIIS/J m 7.6833 0.6847 9.0385 6.3282
SM/J f 9.8333 0.9684 11.7498 7.9168
SM/J m 9.4 0.9684 11.3165 7.4835
WSB/EiJ f 7.44 0.7501 8.9245 5.9555
WSB/EiJ m 7.6 0.7501 9.0845 6.1155


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 7.6417 0.593 8.8153 6.4681
AKR/J both 10.7167 0.6847 12.0718 9.3615
BALB/cByJ both 6.5 0.6847 7.8552 5.1448
BTBR T+ Itpr3tf/J both 7.4333 0.6124 8.6454 6.2212
BUB/BnJ both 7.8917 0.6847 9.2468 6.5365
C3H/HeJ both 6.125 0.7656 7.6401 4.6099
C57BL/10J both 8.28 0.5078 9.285 7.275
C57BL/6J both 5.9167 0.6847 7.2718 4.5615
C57BLKS/J both 6.2208 0.6405 7.4885 4.9532
C57BR/cdJ both 5.5333 0.6847 6.8885 4.1782
C57L/J both 7.7 0.6847 9.0552 6.3448
CBA/J both 7.1 0.6847 8.4552 5.7448
DBA/2J both 9.2833 0.593 10.4569 8.1097
FVB/NJ both 8.7167 0.6847 10.0718 7.3615
KK/HlJ both 8.5167 0.6847 9.8718 7.1615
LP/J both 6.3917 0.593 7.5653 5.2181
MRL/MpJ both 5.1125 0.5626 6.2259 3.9991
NOD.B10Sn-H2b/J both 9.0 0.6847 10.3552 7.6448
NON/ShiLtJ both 9.15 0.6847 10.5052 7.7948
NZW/LacJ both 7.3167 0.6847 8.6718 5.9615
PL/J both 6.3375 0.6405 7.6051 5.0699
RIIIS/J both 7.525 0.593 8.6986 6.3514
SM/J both 9.6167 0.6847 10.9718 8.2615
WSB/EiJ both 7.52 0.5304 8.5697 6.4703




  GWAS USING LINEAR MIXED MODELS