Project measure / variable:   Mills1   early_apoptotic_M06

ID, description, units MPD:25205   early_apoptotic_M06   early apoptotic splenocytes   [%]  at age 6mo  
Data set, strains Mills1   inbred   7 strains     sex: both     age: 26wks
Procedure apoptosis assessment
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  STRAIN COMPARISON PLOT
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Mills1 - early apoptotic splenocytes at age 6mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested7 strains7 strains
Mean of the strain means4.58   % 3.94   %
Median of the strain means3.97   % 4.03   %
SD of the strain means± 1.66 ± 0.910
Coefficient of variation (CV)0.362 0.231
Min–max range of strain means2.60   –   7.47   % 2.50   –   5.40   %
Mean sample size per strain3.0   mice 3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 4.3393 4.3393 6.867 0.014
strain 6 36.2429 6.0405 9.5592 < 0.0001
sex:strain 6 28.1457 4.691 7.4235 0.0001
Residuals 28 17.6933 0.6319


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 5.83 1.06   3 0.612 0.182 4.7, 6.8 0.75
A/J m 4.4 0.346   3 0.2 0.0787 4.2, 4.8 0.51
AKR/J f 3.37 0.404   3 0.233 0.12 3.0, 3.8 -0.73
AKR/J m 5.4 0.964   3 0.557 0.179 4.7, 6.5 1.61
BALB/cByJ f 3.97 0.569   3 0.328 0.143 3.5, 4.6 -0.37
BALB/cByJ m 2.5 0.458   3 0.265 0.183 2.0, 2.9 -1.58
C57BL/6J f 2.6 0.1   3 0.0577 0.0385 2.5, 2.7 -1.2
C57BL/6J m 3.77 0.814   3 0.47 0.216 3.2, 4.7 -0.19
KK/HlJ f 5.03 1.31   3 0.754 0.259 3.8, 6.4 0.27
KK/HlJ m 4.03 0.404   3 0.233 0.1 3.6, 4.4 0.1
NZO/HlLtJ f 3.8 0.3   3 0.173 0.0789 3.5, 4.1 -0.47
NZO/HlLtJ m 3.27 1.14   3 0.657 0.348 2.0, 4.2 -0.73
SM/J f 7.47 1.33   3 0.769 0.178 6.0, 8.6 1.74
SM/J m 4.2 0.529   3 0.306 0.126 3.8, 4.8 0.29


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J f 5.8333 0.4589 6.7734 4.8932
A/J m 4.4 0.4589 5.3401 3.4599
AKR/J f 3.3667 0.4589 4.3068 2.4266
AKR/J m 5.4 0.4589 6.3401 4.4599
BALB/cByJ f 3.9667 0.4589 4.9068 3.0266
BALB/cByJ m 2.5 0.4589 3.4401 1.5599
C57BL/6J f 2.6 0.4589 3.5401 1.6599
C57BL/6J m 3.7667 0.4589 4.7068 2.8266
KK/HlJ f 5.0333 0.4589 5.9734 4.0932
KK/HlJ m 4.0333 0.4589 4.9734 3.0932
NZO/HlLtJ f 3.8 0.4589 4.7401 2.8599
NZO/HlLtJ m 3.2667 0.4589 4.2068 2.3266
SM/J f 7.4667 0.4589 8.4068 6.5266
SM/J m 4.2 0.4589 5.1401 3.2599


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
A/J both 5.1167 0.3245 5.7814 4.4519
AKR/J both 4.3833 0.3245 5.0481 3.7186
BALB/cByJ both 3.2333 0.3245 3.8981 2.5686
C57BL/6J both 3.1833 0.3245 3.8481 2.5186
KK/HlJ both 4.5333 0.3245 5.1981 3.8686
NZO/HlLtJ both 3.5333 0.3245 4.1981 2.8686
SM/J both 5.8333 0.3245 6.4981 5.1686




  GWAS USING LINEAR MIXED MODELS