Project measure / variable:   Ackert1   fatwt_M06

ID, description, units MPD:25051   fatwt_M06   weight of fat portion of body mass, head excluded   [g]  at age 6mo  
Data set, strains Ackert1   inbred   32 strains     sex: both     age: 26wks
Procedure DXA
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  STRAIN COMPARISON PLOT
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Ackert1 - weight of fat portion of body mass, head excluded at age 6mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested31 strains30 strains
Mean of the strain means6.82   g 6.93   g
Median of the strain means5.39   g 6.14   g
SD of the strain means± 3.90 ± 2.87
Coefficient of variation (CV)0.572 0.414
Min–max range of strain means3.00   –   18.6   g 3.16   –   14.1   g
Mean sample size per strain7.0   mice 6.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 6.6628 6.6628 2.9071 0.0891
strain 30 3314.1313 110.471 48.1999 < 0.0001
sex:strain 30 493.1019 16.4367 7.1715 < 0.0001
Residuals 344 788.4261 2.2919


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 5.39 1.04   8 0.367 0.193 4.45, 7.76 -0.37
129S1/SvImJ m 5.26 0.207   7 0.0784 0.0395 5.0, 5.59 -0.58
A/J f 8.41 2.26   8 0.798 0.268 3.86, 10.4 0.41
A/J m 6.91 2.22   8 0.786 0.322 4.35, 9.99 -0.01
AKR/J f 16.0 3.34   6 1.36 0.209 10.7, 20.2 2.35
AKR/J m 14.1 1.46   5 0.653 0.104 11.9, 15.5 2.5
BALB/cByJ f 5.44 1.09   6 0.445 0.2 4.17, 7.3 -0.35
BALB/cByJ m 5.84 0.374   6 0.153 0.0639 5.41, 6.31 -0.38
BTBR T+ Itpr3tf/J f 14.3 4.21   5 1.88 0.294 10.5, 20.8 1.92
BTBR T+ Itpr3tf/J m 9.95 1.89   7 0.715 0.19 7.7, 12.9 1.05
BUB/BnJ f 4.84 0.403   8 0.143 0.0832 4.2, 5.57 -0.51
BUB/BnJ m 5.58 1.42   4 0.708 0.254 4.49, 7.66 -0.47
C3H/HeJ f 4.56 0.375   8 0.133 0.0822 4.07, 5.03 -0.58
C3H/HeJ m 6.71 2.21   6 0.9 0.329 4.05, 10.1 -0.08
C57BL/10J f 5.61 1.47   8 0.52 0.262 3.94, 8.55 -0.31
C57BL/10J m 6.4 0.81   6 0.331 0.127 5.06, 7.42 -0.18
C57BL/6J f 5.09 1.08   8 0.381 0.212 3.81, 6.81 -0.44
C57BL/6J m 5.61 1.3   8 0.46 0.232 4.8, 8.54 -0.46
C57BLKS/J f 4.66 0.422   8 0.149 0.0905 4.26, 5.41 -0.55
C57BLKS/J m 5.84 0.739   8 0.261 0.127 4.82, 7.01 -0.38
C57BR/cdJ f 4.66 0.606   7 0.229 0.13 3.96, 5.63 -0.55
C57BR/cdJ m 6.83 2.55   6 1.04 0.374 2.37, 9.18 -0.03
C57L/J f 5.37 0.835   7 0.316 0.156 4.23, 6.36 -0.37
C57L/J m 12.6 3.38   5 1.51 0.269 8.98, 17.8 1.98
CAST/EiJ f 3.0 0.188   6 0.0766 0.0626 2.72, 3.27 -0.98
CAST/EiJ m 3.16 0.447   7 0.169 0.141 2.4, 3.71 -1.31
CBA/J f 9.32 1.88   8 0.666 0.202 6.62, 11.1 0.64
CBA/J m 10.4 1.32   4 0.662 0.128 8.82, 11.7 1.21
DBA/2J f 10.3 1.89   5 0.847 0.183 7.72, 12.5 0.89
DBA/2J m 6.04 1.7   7 0.641 0.281 3.84, 9.06 -0.31
FVB/NJ f 7.27 1.62   8 0.572 0.222 3.75, 8.72 0.11
FVB/NJ m 6.24 1.45   6 0.594 0.233 4.45, 8.38 -0.24
KK/HlJ f 6.52 2.13   4 1.07 0.327 4.57, 9.55 -0.08
KK/HlJ m 7.85 2.12   7 0.802 0.27 5.69, 10.8 0.32
LP/J f 4.42 0.503   6 0.205 0.114 3.87, 5.28 -0.62
LP/J m 4.83 0.438   8 0.155 0.0907 3.89, 5.22 -0.73
MOLF/EiJ f 3.03 0.214   7 0.081 0.0708 2.79, 3.45 -0.97
MOLF/EiJ m 3.39 0.134   7 0.0505 0.0394 3.24, 3.62 -1.23
MRL/MpJ f 18.6 1.83   3 1.06 0.0986 16.6, 20.2 3.02
MRL/MpJ m 13.0 1.62   7 0.612 0.124 10.4, 14.9 2.12
NOD.B10Sn-H2b/J f 5.55 0.843   8 0.298 0.152 4.47, 6.55 -0.33
NON/ShiLtJ f 10.4 1.48   8 0.522 0.142 7.78, 12.3 0.92
NON/ShiLtJ m 9.63 2.7   7 1.02 0.281 5.27, 13.1 0.94
NZW/LacJ f 11.8 1.67   8 0.592 0.142 9.78, 14.4 1.28
NZW/LacJ m 9.48 3.16   5 1.41 0.334 6.92, 14.8 0.89
P/J f 4.25 0.695   6 0.284 0.164 3.5, 5.46 -0.66
P/J m 5.11 1.65   6 0.673 0.323 3.2, 7.39 -0.63
PL/J f 5.87 0.942   8 0.333 0.161 4.71, 7.34 -0.24
PL/J m 8.13 1.13   8 0.401 0.139 6.94, 9.92 0.42
PWD/PhJ f 3.11 0.336   5 0.15 0.108 2.82, 3.61 -0.95
PWD/PhJ m 3.26 0.146   4 0.0731 0.0448 3.13, 3.46 -1.28
RIIIS/J f 4.43 0.541   8 0.191 0.122 3.88, 5.3 -0.61
RIIIS/J m 7.09 1.12   6 0.457 0.158 6.05, 9.2 0.06
SJL/J f 4.21 0.724   8 0.256 0.172 3.42, 5.86 -0.67
SJL/J m 4.24 0.849   6 0.347 0.2 3.35, 5.66 -0.94
SM/J f 7.66 1.27   8 0.449 0.166 5.37, 9.21 0.21
SM/J m 5.21 2.17   8 0.768 0.416 3.03, 9.34 -0.6
SWR/J f 3.96 0.517   6 0.211 0.131 3.4, 4.8 -0.73
SWR/J m 5.4 1.42   6 0.578 0.262 4.01, 7.26 -0.53
WSB/EiJ f 3.47 0.501   6 0.205 0.145 2.86, 4.37 -0.86
WSB/EiJ m 3.73 0.278   6 0.114 0.0746 3.42, 4.17 -1.11


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 5.395 0.5352 6.4478 4.3422
129S1/SvImJ m 5.2557 0.5722 6.3812 4.1303
A/J f 8.4075 0.5352 9.4603 7.3547
A/J m 6.905 0.5352 7.9578 5.8522
AKR/J f 15.9833 0.6181 17.199 14.7677
AKR/J m 14.1 0.677 15.4317 12.7683
BALB/cByJ f 5.44 0.6181 6.6556 4.2244
BALB/cByJ m 5.845 0.6181 7.0606 4.6294
BTBR T+ Itpr3tf/J f 14.32 0.677 15.6517 12.9883
BTBR T+ Itpr3tf/J m 9.9529 0.5722 11.0783 8.8274
BUB/BnJ f 4.8438 0.5352 5.8965 3.791
BUB/BnJ m 5.5775 0.757 7.0663 4.0887
C3H/HeJ f 4.5637 0.5352 5.6165 3.511
C3H/HeJ m 6.71 0.6181 7.9256 5.4944
C57BL/10J f 5.6062 0.5352 6.659 4.5535
C57BL/10J m 6.3967 0.6181 7.6123 5.181
C57BL/6J f 5.0875 0.5352 6.1403 4.0347
C57BL/6J m 5.6075 0.5352 6.6603 4.5547
C57BLKS/J f 4.6637 0.5352 5.7165 3.611
C57BLKS/J m 5.8375 0.5352 6.8903 4.7847
C57BR/cdJ f 4.6629 0.5722 5.7883 3.5374
C57BR/cdJ m 6.8317 0.6181 8.0473 5.616
C57L/J f 5.37 0.5722 6.4955 4.2445
C57L/J m 12.556 0.677 13.8877 11.2243
CAST/EiJ f 2.9983 0.6181 4.214 1.7827
CAST/EiJ m 3.1586 0.5722 4.284 2.0331
CBA/J f 9.3188 0.5352 10.3715 8.266
CBA/J m 10.365 0.757 11.8538 8.8762
DBA/2J f 10.348 0.677 11.6797 9.0163
DBA/2J m 6.0386 0.5722 7.164 4.9131
FVB/NJ f 7.2738 0.5352 8.3265 6.221
FVB/NJ m 6.235 0.6181 7.4506 5.0194
KK/HlJ f 6.52 0.757 8.0088 5.0312
KK/HlJ m 7.85 0.5722 8.9755 6.7245
LP/J f 4.4217 0.6181 5.6373 3.206
LP/J m 4.835 0.5352 5.8878 3.7822
MOLF/EiJ f 3.0286 0.5722 4.154 1.9031
MOLF/EiJ m 3.3943 0.5722 4.5197 2.2688
MRL/MpJ f 18.6 0.8741 20.3192 16.8808
MRL/MpJ m 13.0143 0.5722 14.1397 11.8888
NOD.B10Sn-H2b/J f 5.555 0.5352 6.6078 4.5022
NOD.B10Sn-H2b/J m 5.54 1.0705 7.6455 3.4345
NON/ShiLtJ f 10.4187 0.5352 11.4715 9.366
NON/ShiLtJ m 9.6271 0.5722 10.7526 8.5017
NZW/LacJ f 11.76 0.5352 12.8128 10.7072
NZW/LacJ m 9.478 0.677 10.8097 8.1463
P/J f 4.25 0.6181 5.4656 3.0344
P/J m 5.1067 0.6181 6.3223 3.891
PL/J f 5.8662 0.5352 6.919 4.8135
PL/J m 8.135 0.5352 9.1878 7.0822
PWD/PhJ f 3.11 0.677 4.4417 1.7783
PWD/PhJ m 3.265 0.757 4.7538 1.7762
RIIIS/J f 4.4275 0.5352 5.4803 3.3747
RIIIS/J m 7.0867 0.6181 8.3023 5.871
SJL/J f 4.215 0.5352 5.2678 3.1622
SJL/J m 4.2367 0.6181 5.4523 3.021
SM/J f 7.6638 0.5352 8.7165 6.611
SM/J m 5.2138 0.5352 6.2665 4.161
SWR/J f 3.9617 0.6181 5.1773 2.746
SWR/J m 5.3983 0.6181 6.614 4.1827
WSB/EiJ f 3.47 0.6181 4.6856 2.2544
WSB/EiJ m 3.725 0.6181 4.9406 2.5094


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 5.3254 0.3918 6.0959 4.5548
A/J both 7.6563 0.3785 8.4007 6.9118
AKR/J both 15.0417 0.4584 15.9432 14.1401
BALB/cByJ both 5.6425 0.437 6.5021 4.7829
BTBR T+ Itpr3tf/J both 12.1364 0.4432 13.0082 11.2646
BUB/BnJ both 5.2106 0.4635 6.1224 4.2989
C3H/HeJ both 5.6369 0.4088 6.4409 4.8328
C57BL/10J both 6.0015 0.4088 6.8055 5.1974
C57BL/6J both 5.3475 0.3785 6.0919 4.6031
C57BLKS/J both 5.2506 0.3785 5.995 4.5062
C57BR/cdJ both 5.7473 0.4211 6.5756 4.9189
C57L/J both 8.963 0.4432 9.8348 8.0912
CAST/EiJ both 3.0785 0.4211 3.9068 2.2501
CBA/J both 9.8419 0.4635 10.7536 8.9301
DBA/2J both 8.1933 0.4432 9.0651 7.3215
FVB/NJ both 6.7544 0.4088 7.5584 5.9503
KK/HlJ both 7.185 0.4744 8.1182 6.2518
LP/J both 4.6283 0.4088 5.4324 3.8243
MOLF/EiJ both 3.2114 0.4046 4.0073 2.4156
MRL/MpJ both 15.8071 0.5224 16.8345 14.7797
NOD.B10Sn-H2b/J both 5.5475 0.5984 6.7245 4.3705
NON/ShiLtJ both 10.0229 0.3918 10.7935 9.2524
NZW/LacJ both 10.619 0.4315 11.4678 9.7702
P/J both 4.6783 0.437 5.5379 3.8187
PL/J both 7.0006 0.3785 7.745 6.2562
PWD/PhJ both 3.1875 0.5078 4.1862 2.1888
RIIIS/J both 5.7571 0.4088 6.5612 4.953
SJL/J both 4.2258 0.4088 5.0299 3.4218
SM/J both 6.4388 0.3785 7.1832 5.6943
SWR/J both 4.68 0.437 5.5396 3.8204
WSB/EiJ both 3.5975 0.437 4.4571 2.7379




  GWAS USING LINEAR MIXED MODELS