Project measure / variable:   Ackert1   LTM_M20

ID, description, units MPD:25048   LTM_M20   weight of lean tissue mass, head excluded   [g]  at age 20mo  
Data set, strains Ackert1   inbred   28 strains     sex: both     age: 87wks
Procedure DXA
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  STRAIN COMPARISON PLOT
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Ackert1 - weight of lean tissue mass, head excluded at age 20mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains26 strains
Mean of the strain means18.7   g 21.9   g
Median of the strain means17.7   g 21.4   g
SD of the strain means± 2.94 ± 4.40
Coefficient of variation (CV)0.157 0.201
Min–max range of strain means13.8   –   25.4   g 16.0   –   37.2   g
Mean sample size per strain7.0   mice 6.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 748.1981 748.1981 120.8925 < 0.0001
strain 27 3536.1602 130.9689 21.1617 < 0.0001
sex:strain 27 519.6327 19.2457 3.1097 < 0.0001
Residuals 310 1918.5751 6.189


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 19.6 1.82   8 0.645 0.0931 17.4, 22.3 0.3
129S1/SvImJ m 20.8 2.45   7 0.928 0.118 17.7, 24.4 -0.25
A/J f 15.8 1.68   3 0.968 0.106 13.9, 16.9 -0.99
A/J m 16.8 1.43   4 0.717 0.0852 15.2, 18.5 -1.15
BALB/cByJ f 20.6 2.51   5 1.12 0.122 17.5, 23.8 0.64
BALB/cByJ m 20.5 2.81   7 1.06 0.137 16.4, 23.3 -0.31
BTBR T+ Itpr3tf/J f 23.9 3.07   6 1.25 0.128 20.9, 29.2 1.77
BTBR T+ Itpr3tf/J m 24.1 1.91   3 1.1 0.0791 23.0, 26.3 0.5
BUB/BnJ f 18.3 4.2   8 1.49 0.23 11.0, 24.6 -0.14
C3H/HeJ f 16.2 1.67   6 0.683 0.103 13.9, 17.9 -0.86
C3H/HeJ m 21.4 1.26   8 0.444 0.0587 20.0, 23.2 -0.11
C57BL/10J f 17.5 1.42   8 0.503 0.0814 15.7, 20.0 -0.41
C57BL/10J m 21.4 1.01   7 0.38 0.0469 19.7, 22.7 -0.11
C57BL/6J f 17.6 1.78   8 0.628 0.101 14.0, 19.5 -0.38
C57BL/6J m 23.9 2.1   7 0.794 0.0877 21.2, 27.5 0.46
C57BLKS/J f 16.9 1.0   7 0.378 0.0593 15.0, 18.2 -0.62
C57BLKS/J m 19.6 1.7   7 0.642 0.0868 16.5, 21.7 -0.52
C57BR/cdJ f 21.8 1.8   8 0.637 0.0827 19.9, 25.5 1.05
C57BR/cdJ m 24.3 1.61   8 0.57 0.0663 22.8, 27.6 0.55
C57L/J f 20.6 1.75   8 0.618 0.0847 17.8, 23.5 0.64
C57L/J m 23.9 2.35   7 0.887 0.0984 19.1, 26.1 0.46
CBA/J f 19.8 1.65   8 0.585 0.0835 17.2, 22.0 0.37
CBA/J m 21.9 2.81   8 0.994 0.128 18.0, 25.6 0.0
DBA/2J f 17.3 2.77   7 1.05 0.16 12.1, 20.4 -0.48
DBA/2J m 16.9 3.8   6 1.55 0.225 12.6, 22.8 -1.13
FVB/NJ f 21.2 3.38   6 1.38 0.16 17.2, 25.1 0.85
FVB/NJ m 22.0 2.76   5 1.23 0.125 17.6, 24.3 0.03
KK/HlJ f 20.2 5.29   6 2.16 0.262 13.1, 27.5 0.51
KK/HlJ m 18.7 2.45   7 0.926 0.131 15.0, 22.2 -0.72
LP/J f 17.8 0.818   8 0.289 0.0459 16.5, 18.9 -0.31
LP/J m 20.4 0.835   8 0.295 0.0409 19.1, 22.0 -0.34
MRL/MpJ f 16.9 1.26   4 0.629 0.0745 15.0, 17.6 -0.62
MRL/MpJ m 22.8 6.6   4 3.3 0.29 16.7, 29.0 0.21
NOD.B10Sn-H2b/J f 22.3 2.34   8 0.828 0.105 20.2, 26.8 1.22
NOD.B10Sn-H2b/J m 27.2 1.8   5 0.803 0.0661 24.7, 29.1 1.21
NON/ShiLtJ f 21.7 2.45   9 0.817 0.113 18.2, 25.5 1.02
NON/ShiLtJ m 23.2 3.57   8 1.26 0.154 18.9, 28.6 0.3
NZO/HlLtJ f 25.4 5.74   5 2.57 0.226 16.1, 31.0 2.28
NZO/HlLtJ m 37.2 3.15   4 1.57 0.0847 32.7, 39.7 3.48
NZW/LacJ f 22.2 3.96   8 1.4 0.178 15.6, 29.1 1.19
NZW/LacJ m 28.1 1.39   7 0.525 0.0494 26.5, 30.3 1.41
P/J f 17.3 2.01   8 0.71 0.116 15.3, 20.5 -0.48
P/J m 21.3 1.62   6 0.661 0.0759 19.2, 23.2 -0.13
PL/J f 15.4 2.39   5 1.07 0.155 13.8, 19.5 -1.13
PWD/PhJ f 14.4 1.46   8 0.517 0.101 12.9, 16.6 -1.47
PWD/PhJ m 16.1 1.81   7 0.683 0.112 14.0, 18.4 -1.31
RIIIS/J f 15.5 2.85   8 1.01 0.184 11.9, 20.9 -1.09
RIIIS/J m 17.3 1.95   8 0.688 0.113 13.9, 19.5 -1.04
SM/J f 16.3 0.785   8 0.278 0.0482 14.9, 17.2 -0.82
SM/J m 21.1 2.41   8 0.854 0.115 18.3, 24.5 -0.18
SWR/J f 17.6 1.21   4 0.606 0.0687 16.6, 19.3 -0.38
SWR/J m 22.0 1.04   7 0.393 0.0472 20.8, 23.8 0.03
WSB/EiJ f 13.8 1.54   8 0.544 0.111 11.5, 16.2 -1.67
WSB/EiJ m 16.0 1.49   6 0.607 0.0931 13.7, 17.2 -1.34


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 19.5875 0.8796 21.3182 17.8568
129S1/SvImJ m 20.8 0.9403 22.6501 18.9499
A/J f 15.8333 1.4363 18.6595 13.0072
A/J m 16.825 1.2439 19.2725 14.3775
BALB/cByJ f 20.56 1.1126 22.7491 18.3709
BALB/cByJ m 20.4857 0.9403 22.3359 18.6356
BTBR T+ Itpr3tf/J f 23.9167 1.0156 25.9151 21.9183
BTBR T+ Itpr3tf/J m 24.1 1.4363 26.9261 21.2739
BUB/BnJ f 18.2625 0.8796 19.9932 16.5318
BUB/BnJ m 22.5 1.7591 25.9613 19.0387
C3H/HeJ f 16.1833 1.0156 18.1817 14.1849
C3H/HeJ m 21.4125 0.8796 23.1432 19.6818
C57BL/10J f 17.4875 0.8796 19.2182 15.7568
C57BL/10J m 21.4429 0.9403 23.293 19.5927
C57BL/6J f 17.625 0.8796 19.3557 15.8943
C57BL/6J m 23.9429 0.9403 25.793 22.0927
C57BLKS/J f 16.8714 0.9403 18.7216 15.0213
C57BLKS/J m 19.5714 0.9403 21.4216 17.7213
C57BR/cdJ f 21.7875 0.8796 23.5182 20.0568
C57BR/cdJ m 24.3125 0.8796 26.0432 22.5818
C57L/J f 20.625 0.8796 22.3557 18.8943
C57L/J m 23.8571 0.9403 25.7073 22.007
CBA/J f 19.8 0.8796 21.5307 18.0693
CBA/J m 21.925 0.8796 23.6557 20.1943
DBA/2J f 17.3429 0.9403 19.193 15.4927
DBA/2J m 16.8667 1.0156 18.8651 14.8683
FVB/NJ f 21.1667 1.0156 23.1651 19.1683
FVB/NJ m 22.0 1.1126 24.1891 19.8109
KK/HlJ f 20.2167 1.0156 22.2151 18.2183
KK/HlJ m 18.7286 0.9403 20.5787 16.8784
LP/J f 17.8125 0.8796 19.5432 16.0818
LP/J m 20.425 0.8796 22.1557 18.6943
MRL/MpJ f 16.875 1.2439 19.3225 14.4275
MRL/MpJ m 22.75 1.2439 25.1975 20.3025
NOD.B10Sn-H2b/J f 22.3375 0.8796 24.0682 20.6068
NOD.B10Sn-H2b/J m 27.16 1.1126 29.3491 24.9709
NON/ShiLtJ f 21.7111 0.8293 23.3428 20.0794
NON/ShiLtJ m 23.25 0.8796 24.9807 21.5193
NZO/HlLtJ f 25.44 1.1126 27.6291 23.2509
NZO/HlLtJ m 37.15 1.2439 39.5975 34.7025
NZW/LacJ f 22.225 0.8796 23.9557 20.4943
NZW/LacJ m 28.1429 0.9403 29.993 26.2927
P/J f 17.325 0.8796 19.0557 15.5943
P/J m 21.3167 1.0156 23.3151 19.3183
PL/J f 15.44 1.1126 17.6291 13.2509
PL/J m 18.85 1.7591 22.3113 15.3887
PWD/PhJ f 14.425 0.8796 16.1557 12.6943
PWD/PhJ m 16.1286 0.9403 17.9787 14.2784
RIIIS/J f 15.4625 0.8796 17.1932 13.7318
RIIIS/J m 17.3 0.8796 19.0307 15.5693
SM/J f 16.275 0.8796 18.0057 14.5443
SM/J m 21.0625 0.8796 22.7932 19.3318
SWR/J f 17.65 1.2439 20.0975 15.2025
SWR/J m 22.0286 0.9403 23.8787 20.1784
WSB/EiJ f 13.8 0.8796 15.5307 12.0693
WSB/EiJ m 15.9833 1.0156 17.9817 13.9849


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 20.1937 0.6438 21.4605 18.927
A/J both 16.3292 0.95 18.1985 14.4598
BALB/cByJ both 20.5229 0.7283 21.956 19.0897
BTBR T+ Itpr3tf/J both 24.0083 0.8796 25.739 22.2777
BUB/BnJ both 20.3813 0.9834 22.3162 18.4463
C3H/HeJ both 18.7979 0.6718 20.1197 17.4761
C57BL/10J both 19.4652 0.6438 20.7319 18.1985
C57BL/6J both 20.7839 0.6438 22.0506 19.5172
C57BLKS/J both 18.2214 0.6649 19.5297 16.9132
C57BR/cdJ both 23.05 0.6219 24.2738 21.8262
C57L/J both 22.2411 0.6438 23.5078 20.9744
CBA/J both 20.8625 0.6219 22.0863 19.6387
DBA/2J both 17.1048 0.692 18.4664 15.7431
FVB/NJ both 21.5833 0.7532 23.0654 20.1013
KK/HlJ both 19.4726 0.692 20.8343 18.1109
LP/J both 19.1188 0.6219 20.3425 17.895
MRL/MpJ both 19.8125 0.8796 21.5432 18.0818
NOD.B10Sn-H2b/J both 24.7488 0.7091 26.144 23.3535
NON/ShiLtJ both 22.4806 0.6044 23.6698 21.2913
NZO/HlLtJ both 31.295 0.8344 32.9368 29.6532
NZW/LacJ both 25.1839 0.6438 26.4506 23.9172
P/J both 19.3208 0.6718 20.6426 17.999
PL/J both 17.145 1.0407 19.1927 15.0973
PWD/PhJ both 15.2768 0.6438 16.5435 14.0101
RIIIS/J both 16.3812 0.6219 17.605 15.1575
SM/J both 18.6687 0.6219 19.8925 17.445
SWR/J both 19.8393 0.7796 21.3733 18.3052
WSB/EiJ both 14.8917 0.6718 16.2135 13.5699




  GWAS USING LINEAR MIXED MODELS