Project measure / variable:   Ackert1   TTM_M20

ID, description, units MPD:25043   TTM_M20   total tissue mass, head excluded   [g]  at age 20mo  
Data set, strains Ackert1   inbred   28 strains     sex: both     age: 87wks
Procedure DXA
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  STRAIN COMPARISON PLOT
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Ackert1 - total tissue mass, head excluded at age 20mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains26 strains
Mean of the strain means24.7   g 28.4   g
Median of the strain means23.2   g 26.9   g
SD of the strain means± 5.45 ± 8.66
Coefficient of variation (CV)0.220 0.305
Min–max range of strain means17.4   –   42.6   g 19.4   –   64.6   g
Mean sample size per strain7.0   mice 6.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 818.9292 818.9292 42.8013 < 0.0001
strain 27 12181.1186 451.1525 23.5795 < 0.0001
sex:strain 27 1741.3106 64.493 3.3707 < 0.0001
Residuals 310 5931.3149 19.1333


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 28.0 6.45   8 2.28 0.23 22.3, 41.7 0.6
129S1/SvImJ m 27.1 4.79   7 1.81 0.177 21.4, 34.5 -0.15
A/J f 20.7 3.13   3 1.81 0.152 17.2, 23.3 -0.74
A/J m 20.9 2.16   4 1.08 0.104 18.3, 22.9 -0.86
BALB/cByJ f 24.9 1.96   5 0.877 0.0788 23.1, 27.8 0.03
BALB/cByJ m 25.6 3.85   7 1.45 0.15 20.5, 29.8 -0.32
BTBR T+ Itpr3tf/J f 28.4 2.62   6 1.07 0.0921 24.4, 32.1 0.67
BTBR T+ Itpr3tf/J m 29.8 2.2   3 1.27 0.074 28.3, 32.3 0.16
BUB/BnJ f 21.5 4.73   8 1.67 0.22 13.0, 27.9 -0.59
C3H/HeJ f 19.3 2.15   6 0.876 0.111 16.4, 21.7 -1.0
C3H/HeJ m 25.5 1.87   8 0.663 0.0734 23.2, 28.6 -0.33
C57BL/10J f 23.1 1.03   8 0.365 0.0448 21.4, 24.6 -0.3
C57BL/10J m 27.5 1.59   7 0.601 0.0578 24.1, 28.9 -0.1
C57BL/6J f 22.1 1.86   8 0.658 0.0842 18.2, 24.2 -0.48
C57BL/6J m 31.0 3.9   7 1.48 0.126 25.6, 36.1 0.3
C57BLKS/J f 22.5 1.12   7 0.422 0.0497 21.5, 24.4 -0.41
C57BLKS/J m 24.9 2.91   7 1.1 0.117 19.5, 28.1 -0.4
C57BR/cdJ f 26.6 1.66   8 0.587 0.0624 24.3, 29.6 0.34
C57BR/cdJ m 31.4 1.57   8 0.557 0.0501 28.8, 33.8 0.35
C57L/J f 26.4 3.22   8 1.14 0.122 22.9, 32.8 0.31
C57L/J m 29.6 4.64   7 1.76 0.157 22.2, 35.6 0.14
CBA/J f 31.5 6.5   8 2.3 0.206 21.9, 41.9 1.24
CBA/J m 27.2 3.85   8 1.36 0.141 21.8, 31.7 -0.14
DBA/2J f 23.6 5.73   7 2.17 0.243 14.3, 30.5 -0.21
DBA/2J m 20.1 4.47   6 1.82 0.222 14.9, 26.7 -0.96
FVB/NJ f 27.2 5.44   6 2.22 0.2 19.9, 32.6 0.45
FVB/NJ m 28.2 1.29   5 0.576 0.0457 26.4, 29.8 -0.02
KK/HlJ f 26.7 7.28   6 2.97 0.273 16.4, 34.6 0.36
KK/HlJ m 24.6 5.09   7 1.92 0.207 18.1, 34.1 -0.44
LP/J f 23.3 1.24   8 0.438 0.0532 21.3, 25.0 -0.26
LP/J m 25.5 1.47   8 0.52 0.0576 23.1, 27.9 -0.33
MRL/MpJ f 20.0 1.63   4 0.813 0.0814 17.6, 21.2 -0.87
MRL/MpJ m 27.8 9.16   4 4.58 0.329 19.6, 37.2 -0.07
NOD.B10Sn-H2b/J f 26.0 2.56   8 0.904 0.0986 23.3, 30.1 0.23
NOD.B10Sn-H2b/J m 32.3 2.66   5 1.19 0.0823 28.5, 34.6 0.45
NON/ShiLtJ f 28.1 5.05   9 1.68 0.18 21.6, 37.3 0.62
NON/ShiLtJ m 33.3 11.3   8 3.98 0.339 21.4, 54.7 0.57
NZO/HlLtJ f 42.6 14.1   5 6.32 0.332 18.9, 52.3 3.28
NZO/HlLtJ m 64.6 6.43   4 3.21 0.0995 55.5, 69.9 4.18
NZW/LacJ f 36.6 3.95   8 1.39 0.108 30.1, 40.3 2.18
NZW/LacJ m 39.9 3.73   7 1.41 0.0934 34.7, 46.0 1.33
P/J f 21.3 3.41   8 1.21 0.16 18.1, 26.8 -0.63
P/J m 25.3 2.57   6 1.05 0.102 22.5, 28.1 -0.36
PL/J f 18.6 2.63   5 1.18 0.142 16.6, 23.2 -1.12
PWD/PhJ f 21.0 2.13   8 0.753 0.101 17.9, 24.3 -0.68
PWD/PhJ m 19.9 2.13   7 0.806 0.107 16.6, 22.3 -0.98
RIIIS/J f 22.1 5.65   8 2.0 0.256 14.1, 31.9 -0.48
RIIIS/J m 23.9 4.4   8 1.55 0.184 17.0, 29.5 -0.52
SM/J f 21.9 2.13   8 0.751 0.0968 18.4, 24.9 -0.52
SM/J m 26.7 4.11   8 1.45 0.154 22.4, 34.3 -0.19
SWR/J f 20.9 1.17   4 0.587 0.0563 19.8, 22.3 -0.7
SWR/J m 26.0 0.959   7 0.362 0.0368 24.8, 27.4 -0.28
WSB/EiJ f 17.4 2.47   8 0.872 0.141 14.4, 21.1 -1.34
WSB/EiJ m 19.4 1.69   6 0.69 0.0872 17.2, 21.1 -1.04


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 28.05 1.5465 31.093 25.007
129S1/SvImJ m 27.1143 1.6533 30.3673 23.8612
A/J f 20.6667 2.5254 25.6358 15.6975
A/J m 20.875 2.1871 25.1784 16.5716
BALB/cByJ f 24.88 1.9562 28.7291 21.0309
BALB/cByJ m 25.6286 1.6533 28.8816 22.3755
BTBR T+ Itpr3tf/J f 28.45 1.7857 31.9637 24.9363
BTBR T+ Itpr3tf/J m 29.7667 2.5254 34.7358 24.7975
BUB/BnJ f 21.5125 1.5465 24.5555 18.4695
BUB/BnJ m 26.6 3.093 32.6859 20.5141
C3H/HeJ f 19.2667 1.7857 22.7804 15.753
C3H/HeJ m 25.5375 1.5465 28.5805 22.4945
C57BL/10J f 23.0625 1.5465 26.1055 20.0195
C57BL/10J m 27.5286 1.6533 30.7816 24.2755
C57BL/6J f 22.1125 1.5465 25.1555 19.0695
C57BL/6J m 30.9857 1.6533 34.2388 27.7327
C57BLKS/J f 22.4857 1.6533 25.7388 19.2327
C57BLKS/J m 24.8714 1.6533 28.1245 21.6184
C57BR/cdJ f 26.625 1.5465 29.668 23.582
C57BR/cdJ m 31.425 1.5465 34.468 28.382
C57L/J f 26.4125 1.5465 29.4555 23.3695
C57L/J m 29.6429 1.6533 32.8959 26.3898
CBA/J f 31.525 1.5465 34.568 28.482
CBA/J m 27.1875 1.5465 30.2305 24.1445
DBA/2J f 23.6 1.6533 26.8531 20.3469
DBA/2J m 20.1167 1.7857 23.6304 16.603
FVB/NJ f 27.1833 1.7857 30.697 23.6696
FVB/NJ m 28.2 1.9562 32.0491 24.3509
KK/HlJ f 26.7 1.7857 30.2137 23.1863
KK/HlJ m 24.5857 1.6533 27.8388 21.3327
LP/J f 23.3 1.5465 26.343 20.257
LP/J m 25.525 1.5465 28.568 22.482
MRL/MpJ f 19.975 2.1871 24.2784 15.6716
MRL/MpJ m 27.8 2.1871 32.1034 23.4966
NOD.B10Sn-H2b/J f 25.95 1.5465 28.993 22.907
NOD.B10Sn-H2b/J m 32.32 1.9562 36.1691 28.4709
NON/ShiLtJ f 28.0889 1.4581 30.9578 25.22
NON/ShiLtJ m 33.2625 1.5465 36.3055 30.2195
NZO/HlLtJ f 42.62 1.9562 46.4691 38.7709
NZO/HlLtJ m 64.6 2.1871 68.9034 60.2966
NZW/LacJ f 36.5875 1.5465 39.6305 33.5445
NZW/LacJ m 39.9 1.6533 43.1531 36.6469
P/J f 21.325 1.5465 24.368 18.282
P/J m 25.2833 1.7857 28.797 21.7696
PL/J f 18.6 1.9562 22.4491 14.7509
PL/J m 23.05 3.093 29.1359 16.9641
PWD/PhJ f 21.0125 1.5465 24.0555 17.9695
PWD/PhJ m 19.8714 1.6533 23.1245 16.6184
RIIIS/J f 22.0875 1.5465 25.1305 19.0445
RIIIS/J m 23.8625 1.5465 26.9055 20.8195
SM/J f 21.95 1.5465 24.993 18.907
SM/J m 26.7 1.5465 29.743 23.657
SWR/J f 20.85 2.1871 25.1534 16.5466
SWR/J m 26.0429 1.6533 29.2959 22.7898
WSB/EiJ f 17.45 1.5465 20.493 14.407
WSB/EiJ m 19.3833 1.7857 22.897 15.8696


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 27.5821 1.1319 29.8094 25.3549
A/J both 20.7708 1.6704 24.0576 17.4841
BALB/cByJ both 25.2543 1.2806 27.7741 22.7345
BTBR T+ Itpr3tf/J both 29.1083 1.5465 32.1513 26.0654
BUB/BnJ both 24.0563 1.729 27.4584 20.6541
C3H/HeJ both 22.4021 1.1812 24.7262 20.078
C57BL/10J both 25.2955 1.1319 27.5228 23.0683
C57BL/6J both 26.5491 1.1319 28.7763 24.3219
C57BLKS/J both 23.6786 1.169 25.9788 21.3783
C57BR/cdJ both 29.025 1.0935 31.1767 26.8733
C57L/J both 28.0277 1.1319 30.2549 25.8005
CBA/J both 29.3562 1.0935 31.5079 27.2046
DBA/2J both 21.8583 1.2168 24.2525 19.4641
FVB/NJ both 27.6917 1.3243 30.2975 25.0858
KK/HlJ both 25.6429 1.2168 28.037 23.2487
LP/J both 24.4125 1.0935 26.5642 22.2608
MRL/MpJ both 23.8875 1.5465 26.9305 20.8445
NOD.B10Sn-H2b/J both 29.135 1.2468 31.5883 26.6817
NON/ShiLtJ both 30.6757 1.0627 32.7668 28.5846
NZO/HlLtJ both 53.61 1.4671 56.4968 50.7232
NZW/LacJ both 38.2437 1.1319 40.471 36.0165
P/J both 23.3042 1.1812 25.6283 20.9801
PL/J both 20.825 1.8298 24.4255 17.2245
PWD/PhJ both 20.442 1.1319 22.6692 18.2147
RIIIS/J both 22.975 1.0935 25.1267 20.8233
SM/J both 24.325 1.0935 26.4767 22.1733
SWR/J both 23.4464 1.3708 26.1437 20.7491
WSB/EiJ both 18.4167 1.1812 20.7408 16.0926




  GWAS USING LINEAR MIXED MODELS