Project measure / variable:   Ackert1   total_area_M20

ID, description, units MPD:25028   total_area_M20   total body area, head excluded   [cm2]  at age 20mo  
Data set, strains Ackert1   inbred   28 strains     sex: both     age: 87wks
Procedure DXA
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  STRAIN COMPARISON PLOT
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Ackert1 - total body area, head excluded at age 20mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains26 strains
Mean of the strain means21.8   cm2 23.4   cm2
Median of the strain means21.0   cm2 23.0   cm2
SD of the strain means± 2.98 ± 3.77
Coefficient of variation (CV)0.137 0.161
Min–max range of strain means17.4   –   30.6   cm2 18.4   –   37.6   cm2
Mean sample size per strain7.0   mice 6.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 155.9708 155.9708 36.5031 < 0.0001
strain 27 3059.6759 113.3213 26.5215 < 0.0001
sex:strain 27 299.9084 11.1077 2.5996 < 0.0001
Residuals 310 1324.5694 4.2728


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 23.9 2.59   8 0.914 0.108 21.6, 29.2 0.71
129S1/SvImJ m 22.9 2.44   7 0.922 0.106 19.6, 26.4 -0.13
A/J f 20.1 1.71   3 0.987 0.0852 18.1, 21.2 -0.56
A/J m 20.1 1.55   4 0.774 0.0771 18.7, 22.2 -0.88
BALB/cByJ f 21.4 1.14   5 0.509 0.0532 20.5, 23.4 -0.12
BALB/cByJ m 23.2 1.57   7 0.593 0.0677 21.1, 25.0 -0.05
BTBR T+ Itpr3tf/J f 24.3 1.52   6 0.622 0.0627 22.2, 25.9 0.85
BTBR T+ Itpr3tf/J m 25.9 0.95   3 0.549 0.0367 24.9, 26.8 0.66
BUB/BnJ f 20.1 1.86   8 0.658 0.0928 16.2, 21.9 -0.56
C3H/HeJ f 19.2 1.33   6 0.544 0.0693 17.6, 21.1 -0.86
C3H/HeJ m 22.3 1.05   8 0.37 0.0469 20.4, 23.5 -0.29
C57BL/10J f 21.4 0.722   8 0.255 0.0338 20.5, 22.4 -0.12
C57BL/10J m 21.6 0.698   7 0.264 0.0323 20.8, 22.7 -0.48
C57BL/6J f 20.0 1.02   8 0.361 0.0511 18.5, 21.3 -0.59
C57BL/6J m 23.7 1.36   7 0.516 0.0576 21.4, 25.2 0.08
C57BLKS/J f 19.8 1.18   7 0.448 0.0597 18.4, 22.0 -0.66
C57BLKS/J m 21.8 1.19   7 0.451 0.0548 19.5, 23.0 -0.43
C57BR/cdJ f 22.2 0.839   8 0.297 0.0378 21.1, 23.4 0.14
C57BR/cdJ m 24.1 0.723   8 0.256 0.03 22.6, 24.9 0.18
C57L/J f 23.9 2.09   8 0.74 0.0876 21.9, 28.1 0.71
C57L/J m 25.7 1.38   7 0.52 0.0535 23.3, 27.2 0.61
CBA/J f 25.1 2.73   8 0.965 0.109 21.1, 29.0 1.12
CBA/J m 24.2 1.96   8 0.694 0.0811 21.6, 26.8 0.21
DBA/2J f 21.4 2.85   7 1.08 0.133 17.6, 25.9 -0.12
DBA/2J m 19.6 2.39   6 0.974 0.122 16.6, 22.7 -1.01
FVB/NJ f 23.1 3.06   6 1.25 0.132 19.8, 27.1 0.45
FVB/NJ m 23.7 1.22   5 0.546 0.0515 22.2, 24.8 0.08
KK/HlJ f 22.5 3.16   6 1.29 0.14 18.2, 25.8 0.24
KK/HlJ m 21.8 2.24   7 0.846 0.102 19.2, 25.4 -0.43
LP/J f 20.7 0.9   8 0.318 0.0434 19.4, 22.0 -0.36
LP/J m 21.1 1.42   8 0.502 0.0674 19.8, 24.3 -0.61
MRL/MpJ f 19.9 1.22   4 0.61 0.0613 18.2, 21.0 -0.63
MRL/MpJ m 25.1 3.68   4 1.84 0.147 21.3, 29.2 0.45
NOD.B10Sn-H2b/J f 22.8 0.798   8 0.282 0.0351 21.5, 24.2 0.35
NOD.B10Sn-H2b/J m 25.6 0.711   5 0.318 0.0278 24.9, 26.8 0.58
NON/ShiLtJ f 24.7 2.9   9 0.968 0.118 19.8, 30.2 0.98
NON/ShiLtJ m 26.3 5.45   8 1.93 0.208 18.3, 35.0 0.77
NZO/HlLtJ f 30.6 6.25   5 2.8 0.204 20.0, 36.0 2.96
NZO/HlLtJ m 37.6 1.42   4 0.712 0.0379 36.3, 39.6 3.76
NZW/LacJ f 28.4 1.69   8 0.598 0.0596 25.1, 30.1 2.23
NZW/LacJ m 28.1 1.74   7 0.659 0.062 26.5, 31.4 1.24
P/J f 19.6 2.08   8 0.735 0.106 17.1, 22.4 -0.73
P/J m 21.0 1.24   6 0.504 0.0588 19.5, 22.9 -0.64
PL/J f 17.9 1.12   5 0.5 0.0626 17.0, 19.8 -1.3
PWD/PhJ f 19.8 1.58   8 0.557 0.0797 17.2, 22.0 -0.66
PWD/PhJ m 18.5 1.45   7 0.547 0.0781 16.9, 20.5 -1.3
RIIIS/J f 19.4 2.82   8 0.996 0.146 14.5, 22.2 -0.8
RIIIS/J m 20.8 1.79   8 0.634 0.0861 18.8, 23.6 -0.69
SM/J f 19.8 1.48   8 0.524 0.075 17.2, 21.7 -0.66
SM/J m 23.1 1.76   8 0.621 0.0759 21.7, 27.1 -0.08
SWR/J f 20.2 0.356   4 0.178 0.0176 19.7, 20.5 -0.53
SWR/J m 22.3 1.25   7 0.473 0.0561 19.9, 23.8 -0.29
WSB/EiJ f 17.4 1.37   8 0.486 0.0789 15.6, 19.1 -1.47
WSB/EiJ m 18.4 1.19   6 0.484 0.0645 16.6, 19.5 -1.33


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 23.9125 0.7308 25.3505 22.4745
129S1/SvImJ m 22.9429 0.7813 24.4801 21.4056
A/J f 20.0667 1.1934 22.4149 17.7184
A/J m 20.075 1.0335 22.1086 18.0414
BALB/cByJ f 21.42 0.9244 23.2389 19.6011
BALB/cByJ m 23.1857 0.7813 24.723 21.6484
BTBR T+ Itpr3tf/J f 24.2833 0.8439 25.9438 22.6229
BTBR T+ Itpr3tf/J m 25.8667 1.1934 28.2149 23.5184
BUB/BnJ f 20.05 0.7308 21.488 18.612
BUB/BnJ m 23.5 1.4616 26.376 20.624
C3H/HeJ f 19.2167 0.8439 20.8771 17.5562
C3H/HeJ m 22.2875 0.7308 23.7255 20.8495
C57BL/10J f 21.3875 0.7308 22.8255 19.9495
C57BL/10J m 21.6 0.7813 23.1373 20.0627
C57BL/6J f 19.975 0.7308 21.413 18.537
C57BL/6J m 23.6857 0.7813 25.223 22.1484
C57BLKS/J f 19.8429 0.7813 21.3801 18.3056
C57BLKS/J m 21.7714 0.7813 23.3087 20.2341
C57BR/cdJ f 22.2125 0.7308 23.6505 20.7745
C57BR/cdJ m 24.1375 0.7308 25.5755 22.6995
C57L/J f 23.9 0.7308 25.338 22.462
C57L/J m 25.7 0.7813 27.2373 24.1627
CBA/J f 25.075 0.7308 26.513 23.637
CBA/J m 24.1875 0.7308 25.6255 22.7495
DBA/2J f 21.4429 0.7813 22.9801 19.9056
DBA/2J m 19.6333 0.8439 21.2938 17.9729
FVB/NJ f 23.0833 0.8439 24.7438 21.4229
FVB/NJ m 23.72 0.9244 25.5389 21.9011
KK/HlJ f 22.5 0.8439 24.1605 20.8395
KK/HlJ m 21.8429 0.7813 23.3801 20.3056
LP/J f 20.725 0.7308 22.163 19.287
LP/J m 21.0625 0.7308 22.5005 19.6245
MRL/MpJ f 19.9 1.0335 21.9336 17.8664
MRL/MpJ m 25.05 1.0335 27.0836 23.0164
NOD.B10Sn-H2b/J f 22.75 0.7308 24.188 21.312
NOD.B10Sn-H2b/J m 25.6 0.9244 27.4189 23.7811
NON/ShiLtJ f 24.6889 0.689 26.0446 23.3331
NON/ShiLtJ m 26.25 0.7308 27.688 24.812
NZO/HlLtJ f 30.6 0.9244 32.4189 28.7811
NZO/HlLtJ m 37.55 1.0335 39.5836 35.5164
NZW/LacJ f 28.3625 0.7308 29.8005 26.9245
NZW/LacJ m 28.1429 0.7813 29.6801 26.6056
P/J f 19.55 0.7308 20.988 18.112
P/J m 21.0167 0.8439 22.6771 19.3562
PL/J f 17.88 0.9244 19.6989 16.0611
PL/J m 20.0 1.4616 22.876 17.124
PWD/PhJ f 19.7625 0.7308 21.2005 18.3245
PWD/PhJ m 18.5286 0.7813 20.0659 16.9913
RIIIS/J f 19.35 0.7308 20.788 17.912
RIIIS/J m 20.8375 0.7308 22.2755 19.3995
SM/J f 19.7625 0.7308 21.2005 18.3245
SM/J m 23.1375 0.7308 24.5755 21.6995
SWR/J f 20.2 1.0335 22.2336 18.1664
SWR/J m 22.3286 0.7813 23.8659 20.7913
WSB/EiJ f 17.425 0.7308 18.863 15.987
WSB/EiJ m 18.3833 0.8439 20.0438 16.7229


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 23.4277 0.5349 24.4802 22.3752
A/J both 20.0708 0.7894 21.624 18.5176
BALB/cByJ both 22.3029 0.6052 23.4936 21.1121
BTBR T+ Itpr3tf/J both 25.075 0.7308 26.513 23.637
BUB/BnJ both 21.775 0.8171 23.3827 20.1673
C3H/HeJ both 20.7521 0.5582 21.8504 19.6538
C57BL/10J both 21.4937 0.5349 22.5463 20.4412
C57BL/6J both 21.8304 0.5349 22.8829 20.7778
C57BLKS/J both 20.8071 0.5524 21.8942 19.7201
C57BR/cdJ both 23.175 0.5168 24.1918 22.1582
C57L/J both 24.8 0.5349 25.8525 23.7475
CBA/J both 24.6312 0.5168 25.6481 23.6144
DBA/2J both 20.5381 0.575 21.6695 19.4067
FVB/NJ both 23.4017 0.6258 24.6331 22.1702
KK/HlJ both 22.1714 0.575 23.3028 21.04
LP/J both 20.8938 0.5168 21.9106 19.8769
MRL/MpJ both 22.475 0.7308 23.913 21.037
NOD.B10Sn-H2b/J both 24.175 0.5892 25.3344 23.0156
NON/ShiLtJ both 25.4694 0.5022 26.4576 24.4813
NZO/HlLtJ both 34.075 0.6933 35.4392 32.7108
NZW/LacJ both 28.2527 0.5349 29.3052 27.2002
P/J both 20.2833 0.5582 21.3816 19.185
PL/J both 18.94 0.8647 20.6415 17.2385
PWD/PhJ both 19.1455 0.5349 20.198 18.093
RIIIS/J both 20.0937 0.5168 21.1106 19.0769
SM/J both 21.45 0.5168 22.4668 20.4332
SWR/J both 21.2643 0.6478 22.5389 19.9896
WSB/EiJ both 17.9042 0.5582 19.0025 16.8059




  GWAS USING LINEAR MIXED MODELS