Project measure / variable:   Ackert1   total_area_M06

ID, description, units MPD:25026   total_area_M06   total body area, head excluded   [cm2]  at age 6mo  
Data set, strains Ackert1   inbred   32 strains     sex: both     age: 26wks
Procedure DXA
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  STRAIN COMPARISON PLOT
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Ackert1 - total body area, head excluded at age 6mo

MRL/MpJBTBR T<+> Itpr3<tf>/JAKR/JNZW/LacJNON/ShiLtJCBA/JNOD.B10Sn-H2<b>/JC57L/JBUB/BnJDBA/2JA/JFVB/NJC57BL/10JBALB/cByJKK/HlJC3H/HeJC57BLKS/JPL/JC57BR/cdJC57BL/6JSM/JSWR/J129S1/SvImJSJL/JP/JRIIIS/JLP/JPWD/PhJWSB/EiJMOLF/EiJCAST/EiJ cm2 121416182022242628303234femalemale


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested31 strains30 strains
Mean of the strain means21.9   cm2 23.6   cm2
Median of the strain means21.6   cm2 23.9   cm2
SD of the strain means± 4.58 ± 4.33
Coefficient of variation (CV)0.209 0.184
Min–max range of strain means14.1   –   33.2   cm2 14.4   –   32.5   cm2
Mean sample size per strain7.0   mice 6.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 285.048 285.048 99.2405 < 0.0001
strain 30 6675.0424 222.5014 77.4647 < 0.0001
sex:strain 30 280.6882 9.3563 3.2574 < 0.0001
Residuals 344 988.0695 2.8723


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 61 (61)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S1/SvImJ f 19.7 1.42   8 0.501 0.0719 18.2, 22.7 -0.49
129S1/SvImJ m 22.0 1.51   7 0.572 0.0687 19.4, 23.1 -0.37
A/J f 23.6 2.56   8 0.907 0.109 18.7, 26.9 0.36
A/J m 24.9 1.39   8 0.49 0.0557 22.6, 27.0 0.3
AKR/J f 28.0 2.4   6 0.979 0.0855 24.5, 30.3 1.32
AKR/J m 30.4 1.21   5 0.542 0.0398 29.3, 32.4 1.57
BALB/cByJ f 22.4 1.92   6 0.782 0.0856 19.5, 24.9 0.1
BALB/cByJ m 23.9 1.45   6 0.593 0.0606 21.4, 25.3 0.07
BTBR T+ Itpr3tf/J f 30.3 1.31   5 0.588 0.0434 29.0, 31.8 1.82
BTBR T+ Itpr3tf/J m 28.8 1.73   7 0.654 0.0602 26.6, 31.6 1.2
BUB/BnJ f 23.8 1.29   8 0.454 0.0541 22.4, 25.5 0.41
BUB/BnJ m 25.8 1.94   4 0.97 0.0753 24.2, 28.5 0.51
C3H/HeJ f 21.6 0.752   8 0.266 0.0348 20.3, 22.4 -0.07
C3H/HeJ m 24.3 2.92   6 1.19 0.12 20.0, 27.8 0.16
C57BL/10J f 22.2 1.77   8 0.626 0.0796 19.5, 25.7 0.06
C57BL/10J m 24.5 1.05   6 0.429 0.0429 22.9, 26.2 0.21
C57BL/6J f 20.6 1.47   8 0.521 0.0717 18.4, 22.2 -0.29
C57BL/6J m 23.4 1.24   8 0.44 0.0532 22.1, 26.0 -0.04
C57BLKS/J f 20.6 0.778   8 0.275 0.0377 19.1, 21.5 -0.29
C57BLKS/J m 23.9 0.765   8 0.271 0.0321 23.1, 25.1 0.07
C57BR/cdJ f 21.1 0.848   7 0.321 0.0401 19.8, 22.0 -0.18
C57BR/cdJ m 23.1 4.63   6 1.89 0.2 13.8, 25.9 -0.11
C57L/J f 21.7 1.35   7 0.512 0.0623 20.0, 23.9 -0.05
C57L/J m 29.3 2.36   5 1.06 0.0808 27.3, 33.1 1.32
CAST/EiJ f 14.3 1.17   6 0.479 0.0817 12.6, 15.6 -1.67
CAST/EiJ m 14.4 0.89   7 0.336 0.0617 12.9, 15.5 -2.12
CBA/J f 24.8 1.86   8 0.658 0.0752 21.2, 26.5 0.62
CBA/J m 27.0 1.66   4 0.829 0.0614 25.0, 28.8 0.79
DBA/2J f 25.4 2.23   5 0.999 0.0878 22.0, 27.4 0.75
DBA/2J m 24.2 1.65   7 0.623 0.068 22.1, 27.1 0.14
FVB/NJ f 23.4 1.35   8 0.477 0.0576 20.8, 25.1 0.32
FVB/NJ m 24.2 3.21   6 1.31 0.133 18.1, 27.2 0.14
KK/HlJ f 21.8 2.18   4 1.09 0.0999 19.4, 24.7 -0.03
KK/HlJ m 24.4 2.58   7 0.976 0.106 22.3, 28.4 0.19
LP/J f 17.4 0.977   6 0.399 0.0561 16.4, 19.3 -0.99
LP/J m 19.8 1.09   8 0.386 0.0551 17.8, 21.2 -0.87
MOLF/EiJ f 14.1 0.975   7 0.369 0.0691 12.5, 15.3 -1.71
MOLF/EiJ m 14.7 0.72   7 0.272 0.0489 13.6, 15.4 -2.05
MRL/MpJ f 33.2 0.723   3 0.418 0.0218 32.7, 34.0 2.46
MRL/MpJ m 32.5 1.22   7 0.461 0.0376 30.4, 34.2 2.06
NOD.B10Sn-H2b/J f 25.6 1.91   8 0.675 0.0746 22.6, 27.9 0.8
NON/ShiLtJ f 27.4 1.55   8 0.55 0.0568 24.4, 28.9 1.19
NON/ShiLtJ m 27.5 2.34   7 0.883 0.0851 22.9, 29.5 0.9
NZW/LacJ f 28.5 1.73   8 0.613 0.0609 25.9, 30.1 1.43
NZW/LacJ m 28.3 2.25   5 1.01 0.0795 26.2, 32.0 1.09
P/J f 19.3 0.882   6 0.36 0.0458 18.3, 20.3 -0.58
P/J m 21.6 2.65   6 1.08 0.123 17.1, 24.4 -0.46
PL/J f 20.4 1.48   8 0.524 0.0726 18.5, 22.6 -0.34
PL/J m 23.9 1.06   8 0.376 0.0445 22.4, 25.4 0.07
PWD/PhJ f 15.2 1.06   5 0.474 0.0695 14.3, 17.0 -1.47
PWD/PhJ m 17.2 1.02   4 0.511 0.0593 16.2, 18.6 -1.48
RIIIS/J f 17.2 1.05   8 0.373 0.0614 16.2, 19.2 -1.03
RIIIS/J m 21.2 1.2   6 0.489 0.0564 19.7, 22.8 -0.55
SJL/J f 19.9 1.21   8 0.429 0.0609 18.9, 22.7 -0.45
SJL/J m 21.0 1.57   6 0.641 0.0748 19.4, 23.3 -0.6
SM/J f 21.4 1.63   8 0.578 0.0766 19.1, 23.9 -0.12
SM/J m 22.2 1.42   8 0.504 0.0641 19.6, 23.9 -0.32
SWR/J f 20.2 1.46   6 0.595 0.0723 18.6, 22.3 -0.38
SWR/J m 23.3 1.17   6 0.476 0.05 21.9, 25.1 -0.07
WSB/EiJ f 15.1 1.22   6 0.499 0.0809 13.3, 16.9 -1.49
WSB/EiJ m 15.9 2.12   6 0.863 0.133 11.7, 17.5 -1.78


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 19.7375 0.5992 20.9161 18.5589
129S1/SvImJ m 22.0286 0.6406 23.2885 20.7686
A/J f 23.5875 0.5992 24.7661 22.4089
A/J m 24.8875 0.5992 26.0661 23.7089
AKR/J f 28.0333 0.6919 29.3942 26.6725
AKR/J m 30.42 0.7579 31.9108 28.9292
BALB/cByJ f 22.3833 0.6919 23.7442 21.0225
BALB/cByJ m 23.95 0.6919 25.3109 22.5891
BTBR T+ Itpr3tf/J f 30.28 0.7579 31.7708 28.7892
BTBR T+ Itpr3tf/J m 28.7857 0.6406 30.0456 27.5258
BUB/BnJ f 23.75 0.5992 24.9286 22.5714
BUB/BnJ m 25.75 0.8474 27.4167 24.0833
C3H/HeJ f 21.6 0.5992 22.7786 20.4214
C3H/HeJ m 24.3167 0.6919 25.6775 22.9558
C57BL/10J f 22.225 0.5992 23.4036 21.0464
C57BL/10J m 24.5333 0.6919 25.8942 23.1725
C57BL/6J f 20.5625 0.5992 21.7411 19.3839
C57BL/6J m 23.4 0.5992 24.5786 22.2214
C57BLKS/J f 20.625 0.5992 21.8036 19.4464
C57BLKS/J m 23.8625 0.5992 25.0411 22.6839
C57BR/cdJ f 21.1286 0.6406 22.3885 19.8686
C57BR/cdJ m 23.1333 0.6919 24.4942 21.7725
C57L/J f 21.7429 0.6406 23.0028 20.4829
C57L/J m 29.28 0.7579 30.7708 27.7892
CAST/EiJ f 14.35 0.6919 15.7109 12.9891
CAST/EiJ m 14.4143 0.6406 15.6742 13.1544
CBA/J f 24.75 0.5992 25.9286 23.5714
CBA/J m 27.0 0.8474 28.6667 25.3333
DBA/2J f 25.44 0.7579 26.9308 23.9492
DBA/2J m 24.2143 0.6406 25.4742 22.9544
FVB/NJ f 23.425 0.5992 24.6036 22.2464
FVB/NJ m 24.2 0.6919 25.5609 22.8391
KK/HlJ f 21.825 0.8474 23.4917 20.1583
KK/HlJ m 24.4429 0.6406 25.7028 23.1829
LP/J f 17.4167 0.6919 18.7775 16.0558
LP/J m 19.8 0.5992 20.9786 18.6214
MOLF/EiJ f 14.1143 0.6406 15.3742 12.8544
MOLF/EiJ m 14.7286 0.6406 15.9885 13.4686
MRL/MpJ f 33.1667 0.9785 35.0912 31.2421
MRL/MpJ m 32.4571 0.6406 33.7171 31.1972
NOD.B10Sn-H2b/J f 25.6125 0.5992 26.7911 24.4339
NOD.B10Sn-H2b/J m 25.45 1.1984 27.8071 23.0929
NON/ShiLtJ f 27.375 0.5992 28.5536 26.1964
NON/ShiLtJ m 27.4571 0.6406 28.7171 26.1972
NZW/LacJ f 28.5 0.5992 29.6786 27.3214
NZW/LacJ m 28.3 0.7579 29.7908 26.8092
P/J f 19.2667 0.6919 20.6275 17.9058
P/J m 21.55 0.6919 22.9109 20.1891
PL/J f 20.4375 0.5992 21.6161 19.2589
PL/J m 23.875 0.5992 25.0536 22.6964
PWD/PhJ f 15.24 0.7579 16.7308 13.7492
PWD/PhJ m 17.225 0.8474 18.8917 15.5583
RIIIS/J f 17.1875 0.5992 18.3661 16.0089
RIIIS/J m 21.2167 0.6919 22.5775 19.8558
SJL/J f 19.9125 0.5992 21.0911 18.7339
SJL/J m 20.9667 0.6919 22.3275 19.6058
SM/J f 21.35 0.5992 22.5286 20.1714
SM/J m 22.2125 0.5992 23.3911 21.0339
SWR/J f 20.15 0.6919 21.5109 18.7891
SWR/J m 23.3167 0.6919 24.6775 21.9558
WSB/EiJ f 15.1 0.6919 16.4609 13.7391
WSB/EiJ m 15.9167 0.6919 17.2775 14.5558


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 20.883 0.4386 21.7456 20.0204
A/J both 24.2375 0.4237 25.0709 23.4041
AKR/J both 29.2267 0.5131 30.2359 28.2174
BALB/cByJ both 23.1667 0.4892 24.1289 22.2044
BTBR T+ Itpr3tf/J both 29.5329 0.4962 30.5088 28.5569
BUB/BnJ both 24.75 0.5189 25.7707 23.7293
C3H/HeJ both 22.9583 0.4576 23.8585 22.0582
C57BL/10J both 23.3792 0.4576 24.2793 22.479
C57BL/6J both 21.9812 0.4237 22.8146 21.1479
C57BLKS/J both 22.2437 0.4237 23.0771 21.4104
C57BR/cdJ both 22.131 0.4714 23.0582 21.2037
C57L/J both 25.5114 0.4962 26.4874 24.5355
CAST/EiJ both 14.3821 0.4714 15.3094 13.4549
CBA/J both 25.875 0.5189 26.8957 24.8543
DBA/2J both 24.8271 0.4962 25.8031 23.8512
FVB/NJ both 23.8125 0.4576 24.7126 22.9124
KK/HlJ both 23.1339 0.5311 24.1786 22.0893
LP/J both 18.6083 0.4576 19.5085 17.7082
MOLF/EiJ both 14.4214 0.453 15.3123 13.5305
MRL/MpJ both 32.8119 0.5848 33.9621 31.6618
NOD.B10Sn-H2b/J both 25.5313 0.6699 26.8489 24.2136
NON/ShiLtJ both 27.4161 0.4386 28.2787 26.5535
NZW/LacJ both 28.4 0.4831 29.3502 27.4498
P/J both 20.4083 0.4892 21.3706 19.4461
PL/J both 22.1563 0.4237 22.9896 21.3229
PWD/PhJ both 16.2325 0.5684 17.3506 15.1144
RIIIS/J both 19.2021 0.4576 20.1022 18.302
SJL/J both 20.4396 0.4576 21.3397 19.5395
SM/J both 21.7813 0.4237 22.6146 20.9479
SWR/J both 21.7333 0.4892 22.6956 20.7711
WSB/EiJ both 15.5083 0.4892 16.4706 14.5461




  GWAS USING LINEAR MIXED MODELS

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