Project measure / variable:   Ackert1   BW_M06

ID, description, units MPD:25006   BW_M06   body weight   [g]  at age 6mo  
Data set, strains Ackert1   inbred   32 strains     sex: both     age: 26wks
Procedure body size and weight
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  STRAIN COMPARISON PLOT
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Ackert1 - body weight at age 6mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested31 strains30 strains
Mean of the strain means25.9   g 29.8   g
Median of the strain means24.8   g 29.1   g
SD of the strain means± 7.97 ± 7.74
Coefficient of variation (CV)0.308 0.260
Min–max range of strain means14.1   –   50.7   g 15.4   –   50.2   g
Mean sample size per strain7.0   mice 6.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1790.2762 1790.2762 216.6588 < 0.0001
strain 30 19851.5513 661.7184 80.081 < 0.0001
sex:strain 30 740.1346 24.6712 2.9857 < 0.0001
Residuals 344 2842.5116 8.2631


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 22.7 2.42   8 0.856 0.107 19.6, 27.4 -0.4
129S1/SvImJ m 27.7 1.66   7 0.627 0.06 24.9, 29.6 -0.27
A/J f 26.4 3.83   8 1.36 0.145 19.7, 31.9 0.07
A/J m 28.7 3.13   8 1.11 0.109 24.6, 33.3 -0.14
AKR/J f 41.3 4.74   6 1.94 0.115 35.1, 45.9 1.94
AKR/J m 43.9 1.95   5 0.87 0.0443 41.0, 45.8 1.83
BALB/cByJ f 25.6 2.58   6 1.06 0.101 21.7, 28.7 -0.03
BALB/cByJ m 30.3 0.677   6 0.276 0.0224 29.3, 31.1 0.07
BTBR T+ Itpr3tf/J f 41.9 5.34   5 2.39 0.127 37.2, 50.5 2.01
BTBR T+ Itpr3tf/J m 40.9 4.06   7 1.53 0.0994 36.1, 48.0 1.44
BUB/BnJ f 28.3 2.16   8 0.764 0.0765 25.8, 31.2 0.3
BUB/BnJ m 33.4 4.56   4 2.28 0.137 29.4, 39.8 0.47
C3H/HeJ f 23.7 1.02   8 0.361 0.043 21.7, 25.1 -0.27
C3H/HeJ m 30.7 4.6   6 1.88 0.15 24.0, 35.5 0.12
C57BL/10J f 25.3 2.34   8 0.829 0.0927 22.5, 30.2 -0.07
C57BL/10J m 30.6 1.66   6 0.676 0.0542 28.0, 33.0 0.11
C57BL/6J f 23.5 1.79   8 0.633 0.0762 21.4, 26.2 -0.3
C57BL/6J m 30.7 1.98   8 0.698 0.0644 28.9, 35.2 0.12
C57BLKS/J f 22.1 1.62   8 0.574 0.0734 18.9, 23.8 -0.47
C57BLKS/J m 27.7 1.44   8 0.51 0.0521 25.5, 29.7 -0.27
C57BR/cdJ f 24.8 1.15   7 0.435 0.0463 23.2, 26.0 -0.13
C57BR/cdJ m 28.3 7.92   6 3.23 0.28 12.3, 32.5 -0.19
C57L/J f 25.3 1.62   7 0.612 0.0639 23.3, 28.3 -0.07
C57L/J m 38.8 5.02   5 2.25 0.13 34.5, 46.9 1.17
CAST/EiJ f 14.1 1.06   6 0.433 0.0751 12.7, 15.6 -1.48
CAST/EiJ m 15.4 1.22   7 0.462 0.0792 13.1, 17.0 -1.86
CBA/J f 29.8 2.78   8 0.982 0.0932 25.1, 32.5 0.49
CBA/J m 36.0 3.44   4 1.72 0.0954 31.9, 40.0 0.8
DBA/2J f 29.9 3.12   5 1.4 0.105 25.5, 32.6 0.51
DBA/2J m 29.5 3.23   7 1.22 0.11 25.9, 36.2 -0.04
FVB/NJ f 26.4 2.72   8 0.962 0.103 20.3, 28.8 0.07
FVB/NJ m 29.4 5.18   6 2.11 0.176 19.4, 33.7 -0.05
KK/HlJ f 25.5 4.15   4 2.08 0.163 21.9, 31.5 -0.05
KK/HlJ m 31.0 5.41   7 2.04 0.174 25.6, 39.5 0.16
LP/J f 20.3 1.33   6 0.543 0.0654 18.7, 22.7 -0.7
LP/J m 23.9 1.03   8 0.364 0.0431 21.9, 24.9 -0.76
MOLF/EiJ f 14.1 0.751   7 0.284 0.0532 13.0, 15.0 -1.48
MOLF/EiJ m 15.6 1.24   7 0.467 0.079 13.9, 17.7 -1.83
MRL/MpJ f 50.7 2.85   3 1.65 0.0562 47.8, 53.5 3.11
MRL/MpJ m 50.2 1.6   7 0.606 0.032 48.6, 53.3 2.64
NOD.B10Sn-H2b/J f 30.6 2.52   8 0.892 0.0824 25.8, 33.8 0.59
NON/ShiLtJ f 32.4 2.54   8 0.899 0.0784 27.4, 34.9 0.82
NON/ShiLtJ m 35.7 4.51   7 1.7 0.126 26.9, 41.3 0.77
NZW/LacJ f 33.5 1.63   8 0.577 0.0488 30.3, 35.1 0.96
NZW/LacJ m 36.0 4.54   5 2.03 0.126 32.7, 43.9 0.8
P/J f 21.4 1.24   6 0.508 0.0581 19.6, 23.4 -0.56
P/J m 26.0 4.97   6 2.03 0.191 17.5, 31.7 -0.49
PL/J f 21.6 2.13   8 0.754 0.0989 19.3, 24.8 -0.54
PL/J m 28.2 1.52   8 0.539 0.054 26.6, 30.2 -0.2
PWD/PhJ f 15.4 1.35   5 0.604 0.0874 14.0, 17.6 -1.31
PWD/PhJ m 17.9 1.06   4 0.532 0.0592 16.4, 18.8 -1.53
RIIIS/J f 19.7 1.14   8 0.405 0.0582 18.2, 21.4 -0.77
RIIIS/J m 26.4 1.86   6 0.759 0.0705 23.7, 28.4 -0.44
SJL/J f 22.3 1.54   8 0.544 0.0689 20.4, 25.4 -0.45
SJL/J m 25.1 1.94   6 0.791 0.0772 22.4, 27.6 -0.6
SM/J f 23.6 2.32   8 0.822 0.0986 19.3, 27.1 -0.28
SM/J m 28.3 2.53   8 0.896 0.0895 24.4, 31.3 -0.19
SWR/J f 22.5 2.19   6 0.893 0.0973 20.1, 26.0 -0.42
SWR/J m 28.8 3.03   6 1.24 0.105 25.1, 33.4 -0.13
WSB/EiJ f 17.3 2.33   6 0.95 0.135 15.3, 21.8 -1.08
WSB/EiJ m 18.1 2.54   6 1.04 0.14 13.2, 20.4 -1.51


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 22.65 1.0163 24.649 20.651
129S1/SvImJ m 27.6571 1.0865 29.7941 25.5202
A/J f 26.3875 1.0163 28.3865 24.3885
A/J m 28.6875 1.0163 30.6865 26.6885
AKR/J f 41.2667 1.1735 43.5749 38.9585
AKR/J m 43.94 1.2855 46.4685 41.4115
BALB/cByJ f 25.5667 1.1735 27.8749 23.2585
BALB/cByJ m 30.2667 1.1735 32.5749 27.9585
BTBR T+ Itpr3tf/J f 41.94 1.2855 44.4685 39.4115
BTBR T+ Itpr3tf/J m 40.8571 1.0865 42.9941 38.7202
BUB/BnJ f 28.275 1.0163 30.274 26.276
BUB/BnJ m 33.375 1.4373 36.202 30.548
C3H/HeJ f 23.7125 1.0163 25.7115 21.7135
C3H/HeJ m 30.7333 1.1735 33.0415 28.4251
C57BL/10J f 25.275 1.0163 27.274 23.276
C57BL/10J m 30.5667 1.1735 32.8749 28.2585
C57BL/6J f 23.5 1.0163 25.499 21.501
C57BL/6J m 30.7 1.0163 32.699 28.701
C57BLKS/J f 22.1 1.0163 24.099 20.101
C57BLKS/J m 27.675 1.0163 29.674 25.676
C57BR/cdJ f 24.8429 1.0865 26.9798 22.7059
C57BR/cdJ m 28.3167 1.1735 30.6249 26.0085
C57L/J f 25.3286 1.0865 27.4656 23.1916
C57L/J m 38.78 1.2855 41.3085 36.2515
CAST/EiJ f 14.1333 1.1735 16.4415 11.8251
CAST/EiJ m 15.4429 1.0865 17.5798 13.3059
CBA/J f 29.8 1.0163 31.799 27.801
CBA/J m 36.05 1.4373 38.877 33.223
DBA/2J f 29.88 1.2855 32.4085 27.3515
DBA/2J m 29.4571 1.0865 31.5941 27.3202
FVB/NJ f 26.4375 1.0163 28.4365 24.4385
FVB/NJ m 29.4167 1.1735 31.7249 27.1085
KK/HlJ f 25.525 1.4373 28.352 22.698
KK/HlJ m 31.0429 1.0865 33.1798 28.9059
LP/J f 20.35 1.1735 22.6582 18.0418
LP/J m 23.8875 1.0163 25.8865 21.8885
MOLF/EiJ f 14.1 1.0865 16.237 11.963
MOLF/EiJ m 15.6429 1.0865 17.7798 13.5059
MRL/MpJ f 50.7 1.6596 53.9643 47.4357
MRL/MpJ m 50.2 1.0865 52.337 48.063
NOD.B10Sn-H2b/J f 30.6 1.0163 32.599 28.601
NOD.B10Sn-H2b/J m 33.15 2.0326 37.1479 29.1521
NON/ShiLtJ f 32.4125 1.0163 34.4115 30.4135
NON/ShiLtJ m 35.7143 1.0865 37.8513 33.5773
NZW/LacJ f 33.4625 1.0163 35.4615 31.4635
NZW/LacJ m 36.02 1.2855 38.5485 33.4915
P/J f 21.4 1.1735 23.7082 19.0918
P/J m 26.0 1.1735 28.3082 23.6918
PL/J f 21.575 1.0163 23.574 19.576
PL/J m 28.225 1.0163 30.224 26.226
PWD/PhJ f 15.44 1.2855 17.9685 12.9115
PWD/PhJ m 17.95 1.4373 20.777 15.123
RIIIS/J f 19.675 1.0163 21.674 17.676
RIIIS/J m 26.3667 1.1735 28.6749 24.0585
SJL/J f 22.3375 1.0163 24.3365 20.3385
SJL/J m 25.1 1.1735 27.4082 22.7918
SM/J f 23.575 1.0163 25.574 21.576
SM/J m 28.3125 1.0163 30.3115 26.3135
SWR/J f 22.4833 1.1735 24.7915 20.1751
SWR/J m 28.7667 1.1735 31.0749 26.4585
WSB/EiJ f 17.3 1.1735 19.6082 14.9918
WSB/EiJ m 18.0833 1.1735 20.3915 15.7751


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 25.1536 0.7439 26.6167 23.6905
A/J both 27.5375 0.7186 28.951 26.124
AKR/J both 42.6033 0.8703 44.3151 40.8915
BALB/cByJ both 27.9167 0.8298 29.5488 26.2845
BTBR T+ Itpr3tf/J both 41.3986 0.8416 43.0539 39.7433
BUB/BnJ both 30.825 0.8802 32.5562 29.0938
C3H/HeJ both 27.2229 0.7762 28.7497 25.6962
C57BL/10J both 27.9208 0.7762 29.4476 26.3941
C57BL/6J both 27.1 0.7186 28.5135 25.6865
C57BLKS/J both 24.8875 0.7186 26.301 23.474
C57BR/cdJ both 26.5798 0.7996 28.1525 25.007
C57L/J both 32.0543 0.8416 33.7096 30.399
CAST/EiJ both 14.7881 0.7996 16.3609 13.2153
CBA/J both 32.925 0.8802 34.6562 31.1938
DBA/2J both 29.6686 0.8416 31.3239 28.0133
FVB/NJ both 27.9271 0.7762 29.4538 26.4003
KK/HlJ both 28.2839 0.9009 30.0558 26.512
LP/J both 22.1187 0.7762 23.6455 20.592
MOLF/EiJ both 14.8714 0.7683 16.3825 13.3604
MRL/MpJ both 50.45 0.9918 52.4008 48.4992
NOD.B10Sn-H2b/J both 31.875 1.1363 34.1099 29.6401
NON/ShiLtJ both 34.0634 0.7439 35.5265 32.6003
NZW/LacJ both 34.7413 0.8194 36.3529 33.1296
P/J both 23.7 0.8298 25.3321 22.0679
PL/J both 24.9 0.7186 26.3135 23.4865
PWD/PhJ both 16.695 0.9642 18.5914 14.7986
RIIIS/J both 23.0208 0.7762 24.5476 21.4941
SJL/J both 23.7188 0.7762 25.2455 22.192
SM/J both 25.9438 0.7186 27.3572 24.5303
SWR/J both 25.625 0.8298 27.2571 23.9929
WSB/EiJ both 17.6917 0.8298 19.3238 16.0595




  GWAS USING LINEAR MIXED MODELS