Phenotype measure:   Ackert1   BL_M20

ID, description, units MPD:25003   BL_M20   body length, tip of nose to base of tail   [cm]  at age 20mo
Data set, strains Ackert1   inbred   28 strains     sex: both     age: 87wks
Procedure body size and weight
Ontology mappings


  STRAIN COMPARISON PLOT
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Ackert1 - body length, tip of nose to base of tail at age 20mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains26 strains
Mean of the strain means9.87   cm 10.2   cm
Median of the strain means9.80   cm 10.0   cm
SD of the strain means± 0.484 ± 0.647
Coefficient of variation (CV)0.0490 0.0634
Min–max range of strain means9.00   –   10.8   cm 9.10   –   11.8   cm
Mean sample size per strain6.9   mice 6.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 6.3368 6.3368 47.7121 < 0.0001
strain 27 86.8835 3.2179 24.2289 < 0.0001
sex:strain 27 15.0379 0.557 4.1936 < 0.0001
Residuals 309 41.0392 0.1328


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 10.0 0.385   8 0.136 0.0384 9.5, 10.5 0.27
129S1/SvImJ m 10.1 0.476   7 0.18 0.0469 9.5, 11.0 -0.18
A/J f 9.93 0.929   3 0.536 0.0935 9.3, 11.0 0.13
A/J m 10.9 0.37   4 0.185 0.0338 10.5, 11.3 1.06
BALB/cByJ f 9.73 0.502   5 0.224 0.0516 9.1, 10.5 -0.29
BALB/cByJ m 11.2 0.449   7 0.17 0.04 10.5, 11.7 1.52
BTBR T+ Itpr3tf/J f 10.5 0.327   6 0.133 0.031 10.0, 11.0 1.3
BTBR T+ Itpr3tf/J m 10.9 0.603   3 0.348 0.0551 10.3, 11.5 1.06
BUB/BnJ f 9.64 0.35   8 0.124 0.0363 9.0, 10.0 -0.47
C3H/HeJ f 9.5 0.316   6 0.129 0.0333 9.0, 10.0 -0.76
C3H/HeJ m 9.95 0.366   8 0.13 0.0368 9.5, 10.4 -0.41
C57BL/10J f 9.69 0.223   8 0.0789 0.023 9.5, 10.0 -0.37
C57BL/10J m 9.91 0.195   7 0.0738 0.0197 9.5, 10.1 -0.47
C57BL/6J f 9.7 0.342   8 0.121 0.0353 9.0, 10.0 -0.35
C57BL/6J m 10.1 0.27   7 0.102 0.0268 9.6, 10.5 -0.18
C57BLKS/J f 9.37 0.18   7 0.068 0.0192 9.0, 9.5 -1.03
C57BLKS/J m 9.79 0.267   7 0.101 0.0273 9.5, 10.0 -0.66
C57BR/cdJ f 10.5 0.345   8 0.122 0.0328 10.0, 11.0 1.3
C57BR/cdJ m 10.6 0.354   8 0.125 0.0333 10.0, 11.0 0.59
C57L/J f 10.1 0.275   8 0.0972 0.0272 9.6, 10.5 0.48
C57L/J m 10.5 0.35   7 0.132 0.0332 10.2, 11.0 0.44
CBA/J f 9.91 0.331   8 0.117 0.0334 9.5, 10.5 0.08
CBA/J m 9.97 0.557   8 0.197 0.0559 9.2, 10.6 -0.38
DBA/2J f 9.64 0.506   7 0.191 0.0525 9.0, 10.5 -0.47
DBA/2J m 9.65 0.394   6 0.161 0.0408 9.0, 10.0 -0.88
FVB/NJ f 10.2 0.226   6 0.0922 0.022 10.0, 10.5 0.68
FVB/NJ m 10.1 0.195   5 0.0872 0.0192 10.0, 10.4 -0.18
KK/HlJ f 10.5 0.543   6 0.222 0.0519 9.6, 11.0 1.3
KK/HlJ m 9.89 0.297   7 0.112 0.03 9.5, 10.2 -0.5
LP/J f 9.79 0.267   7 0.101 0.0273 9.5, 10.0 -0.16
LP/J m 9.72 0.292   8 0.103 0.03 9.5, 10.2 -0.77
MRL/MpJ f 10.2 0.759   4 0.38 0.0741 9.5, 11.3 0.68
MRL/MpJ m 11.8 0.58   4 0.29 0.049 11.3, 12.4 2.45
NOD.B10Sn-H2b/J f 10.8 0.207   8 0.073 0.0192 10.5, 11.0 1.92
NOD.B10Sn-H2b/J m 10.8 0.152   5 0.0678 0.0141 10.6, 11.0 0.9
NON/ShiLtJ f 10.1 0.317   9 0.106 0.0312 9.5, 10.5 0.48
NON/ShiLtJ m 10.3 0.484   8 0.171 0.047 9.4, 11.0 0.13
NZO/HlLtJ f 10.8 0.274   5 0.122 0.0254 10.5, 11.0 1.92
NZO/HlLtJ m 11.4 0.479   4 0.239 0.0421 11.0, 12.0 1.83
NZW/LacJ f 10.2 0.243   8 0.0861 0.0238 10.0, 10.5 0.68
NZW/LacJ m 10.6 0.2   7 0.0756 0.0189 10.4, 11.0 0.59
P/J f 9.7 0.404   8 0.143 0.0416 9.4, 10.4 -0.35
P/J m 9.75 0.418   6 0.171 0.0429 9.0, 10.0 -0.72
PL/J f 9.28 0.295   5 0.132 0.0318 9.0, 9.7 -1.22
PWD/PhJ f 9.81 0.259   8 0.0915 0.0264 9.5, 10.0 -0.12
PWD/PhJ m 9.59 0.186   7 0.0705 0.0195 9.5, 10.0 -0.97
RIIIS/J f 9.0 0.535   8 0.189 0.0594 8.5, 10.0 -1.8
RIIIS/J m 9.46 0.302   8 0.107 0.0319 9.0, 10.0 -1.17
SM/J f 9.4 0.193   8 0.0681 0.0205 9.0, 9.5 -0.97
SM/J m 9.78 0.32   8 0.113 0.0327 9.5, 10.2 -0.67
SWR/J f 9.32 0.236   4 0.118 0.0253 9.0, 9.5 -1.14
SWR/J m 9.77 0.368   7 0.139 0.0377 9.2, 10.2 -0.69
WSB/EiJ f 9.03 0.44   8 0.156 0.0487 8.5, 9.6 -1.73
WSB/EiJ m 9.1 0.155   6 0.0632 0.017 8.9, 9.3 -1.73


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 10.025 0.1288 10.2785 9.7715
129S1/SvImJ m 10.1429 0.1377 10.4139 9.8718
A/J f 9.9333 0.2104 10.3473 9.5193
A/J m 10.95 0.1822 11.3085 10.5915
BALB/cByJ f 9.73 0.163 10.0507 9.4093
BALB/cByJ m 11.2143 0.1377 11.4853 10.9433
BTBR T+ Itpr3tf/J f 10.5333 0.1488 10.8261 10.2406
BTBR T+ Itpr3tf/J m 10.9333 0.2104 11.3473 10.5193
BUB/BnJ f 9.6375 0.1288 9.891 9.384
BUB/BnJ m 10.15 0.2577 10.6571 9.6429
C3H/HeJ f 9.5 0.1488 9.7928 9.2072
C3H/HeJ m 9.95 0.1288 10.2035 9.6965
C57BL/10J f 9.6875 0.1288 9.941 9.434
C57BL/10J m 9.9143 0.1377 10.1853 9.6433
C57BL/6J f 9.7 0.1288 9.9535 9.4465
C57BL/6J m 10.0571 0.1377 10.3282 9.7861
C57BLKS/J f 9.3714 0.1377 9.6425 9.1004
C57BLKS/J m 9.7857 0.1377 10.0567 9.5147
C57BR/cdJ f 10.525 0.1288 10.7785 10.2715
C57BR/cdJ m 10.625 0.1288 10.8785 10.3715
C57L/J f 10.1125 0.1288 10.366 9.859
C57L/J m 10.5286 0.1377 10.7996 10.2575
CBA/J f 9.9125 0.1288 10.166 9.659
CBA/J m 9.975 0.1288 10.2285 9.7215
DBA/2J f 9.6429 0.1377 9.9139 9.3718
DBA/2J m 9.65 0.1488 9.9428 9.3572
FVB/NJ f 10.25 0.1488 10.5428 9.9572
FVB/NJ m 10.14 0.163 10.4607 9.8193
KK/HlJ f 10.4667 0.1488 10.7594 10.1739
KK/HlJ m 9.8857 0.1377 10.1567 9.6147
LP/J f 9.7857 0.1377 10.0567 9.5147
LP/J m 9.725 0.1288 9.9785 9.4715
MRL/MpJ f 10.25 0.1822 10.6085 9.8915
MRL/MpJ m 11.85 0.1822 12.2085 11.4915
NOD.B10Sn-H2b/J f 10.7625 0.1288 11.016 10.509
NOD.B10Sn-H2b/J m 10.76 0.163 11.0807 10.4393
NON/ShiLtJ f 10.1444 0.1215 10.3835 9.9054
NON/ShiLtJ m 10.3 0.1288 10.5535 10.0465
NZO/HlLtJ f 10.8 0.163 11.1207 10.4793
NZO/HlLtJ m 11.375 0.1822 11.7335 11.0165
NZW/LacJ f 10.225 0.1288 10.4785 9.9715
NZW/LacJ m 10.6 0.1377 10.871 10.329
P/J f 9.7 0.1288 9.9535 9.4465
P/J m 9.75 0.1488 10.0428 9.4572
PL/J f 9.28 0.163 9.6007 8.9593
PL/J m 9.35 0.2577 9.8571 8.8429
PWD/PhJ f 9.8125 0.1288 10.066 9.559
PWD/PhJ m 9.5857 0.1377 9.8567 9.3147
RIIIS/J f 9.0 0.1288 9.2535 8.7465
RIIIS/J m 9.4625 0.1288 9.716 9.209
SM/J f 9.4 0.1288 9.6535 9.1465
SM/J m 9.775 0.1288 10.0285 9.5215
SWR/J f 9.325 0.1822 9.6835 8.9665
SWR/J m 9.7714 0.1377 10.0425 9.5004
WSB/EiJ f 9.025 0.1288 9.2785 8.7715
WSB/EiJ m 9.1 0.1488 9.3928 8.8072


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 10.0839 0.0943 10.2695 9.8984
A/J both 10.4417 0.1392 10.7155 10.1678
BALB/cByJ both 10.4721 0.1067 10.6821 10.2622
BTBR T+ Itpr3tf/J both 10.7333 0.1288 10.9869 10.4798
BUB/BnJ both 9.8937 0.1441 10.1772 9.6103
C3H/HeJ both 9.725 0.0984 9.9186 9.5314
C57BL/10J both 9.8009 0.0943 9.9865 9.6153
C57BL/6J both 9.8786 0.0943 10.0641 9.693
C57BLKS/J both 9.5786 0.0974 9.7702 9.3869
C57BR/cdJ both 10.575 0.0911 10.7543 10.3957
C57L/J both 10.3205 0.0943 10.5061 10.135
CBA/J both 9.9438 0.0911 10.123 9.7645
DBA/2J both 9.6464 0.1014 9.8459 9.447
FVB/NJ both 10.195 0.1103 10.4121 9.9779
KK/HlJ both 10.1762 0.1014 10.3757 9.9767
LP/J both 9.7554 0.0943 9.9409 9.5698
MRL/MpJ both 11.05 0.1288 11.3035 10.7965
NOD.B10Sn-H2b/J both 10.7613 0.1039 10.9657 10.5568
NON/ShiLtJ both 10.2222 0.0885 10.3964 10.048
NZO/HlLtJ both 11.0875 0.1222 11.328 10.847
NZW/LacJ both 10.4125 0.0943 10.5981 10.2269
P/J both 9.725 0.0984 9.9186 9.5314
PL/J both 9.315 0.1525 9.615 9.015
PWD/PhJ both 9.6991 0.0943 9.8847 9.5135
RIIIS/J both 9.2313 0.0911 9.4105 9.052
SM/J both 9.5875 0.0911 9.7668 9.4082
SWR/J both 9.5482 0.1142 9.7729 9.3235
WSB/EiJ both 9.0625 0.0984 9.2561 8.8689




  GENOME-WIDE ASSOCIATION (GWAS) VIEW
Plot generated with pyLMM using 132K SNP array. Click on plot to view at larger size.