Project measure / variable:   Xing1   PR_M06

ID, description, units MPD:24921   PR_M06   interval PR   [ms]  at age 6mo  
Data set, strains Xing1   inbred   28 strains     sex: both     age: 26wks
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  STRAIN COMPARISON PLOT
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Xing1 - interval PR at age 6mo

C57BR/cdJNZO/HlLtJC57L/JNZW/LacJSWR/JMRL/MpJC57BLKS/JC57BL/6JPL/JBTBR T<+> Itpr3<tf>/JRIIIS/JKK/HlJA/JC57BL/10JNOD.B10Sn-H2<b>/JLP/JSJL/J129S1/SvImJBALB/cByJCBA/JDBA/2JFVB/NJNON/ShiLtJSM/JAKR/JP/JC3H/HeJBUB/BnJ ms 1520253035femalemale


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains27 strains
Mean of the strain means27.2   ms 26.9   ms
Median of the strain means28.4   ms 27.8   ms
SD of the strain means± 4.01 ± 3.97
Coefficient of variation (CV)0.148 0.148
Min–max range of strain means16.0   –   32.1   ms 16.9   –   31.7   ms
Mean sample size per strain7.5   mice 7.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 10.0011 10.0011 0.6339 0.4265
strain 26 5609.8278 215.7626 13.6748 < 0.0001
sex:strain 26 393.8272 15.1472 0.96 0.5231
Residuals 348 5490.8038 15.7782


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 55 (55)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S1/SvImJ f 26.5 4.34   8 1.54 0.164 21.3, 32.5 -0.17
129S1/SvImJ m 28.4 5.7   7 2.15 0.2 18.5, 34.6 0.39
A/J f 28.7 2.93   8 1.04 0.102 22.0, 31.6 0.38
A/J m 28.0 4.0   8 1.41 0.143 22.0, 33.4 0.29
AKR/J f 22.3 5.1   8 1.8 0.228 16.9, 30.4 -1.21
AKR/J m 21.5 4.43   7 1.68 0.206 16.7, 27.2 -1.35
BALB/cByJ f 27.7 1.59   7 0.602 0.0575 25.2, 30.5 0.13
BALB/cByJ m 25.9 1.81   8 0.638 0.0698 22.5, 28.4 -0.24
BTBR T+ Itpr3tf/J f 29.6 5.07   6 2.07 0.171 19.8, 34.0 0.61
BUB/BnJ f 16.0 3.14   7 1.19 0.196 11.6, 19.5 -2.78
BUB/BnJ m 18.1 6.09   7 2.3 0.336 11.6, 29.5 -2.2
C3H/HeJ f 20.7 3.84   8 1.36 0.185 16.6, 27.9 -1.61
C3H/HeJ m 16.9 1.11   7 0.418 0.0656 15.5, 18.2 -2.51
C57BL/10J f 30.1 4.51   7 1.7 0.15 20.8, 33.7 0.73
C57BL/10J m 26.3 3.5   8 1.24 0.133 18.8, 30.2 -0.14
C57BL/6J f 29.4 4.47   8 1.58 0.152 19.6, 32.7 0.56
C57BL/6J m 30.0 2.57   8 0.909 0.0856 24.3, 32.2 0.79
C57BLKS/J f 30.2 2.25   8 0.797 0.0747 27.9, 34.1 0.75
C57BLKS/J m 29.3 3.09   7 1.17 0.105 25.0, 34.4 0.62
C57BR/cdJ f 31.9 1.3   7 0.493 0.0408 29.6, 33.5 1.18
C57BR/cdJ m 31.3 1.62   7 0.611 0.0517 28.0, 33.2 1.12
C57L/J f 30.7 2.31   8 0.816 0.0752 26.5, 33.4 0.88
C57L/J m 31.3 1.11   8 0.394 0.0356 29.4, 33.0 1.12
CBA/J f 26.0 4.95   7 1.87 0.19 19.6, 31.3 -0.29
CBA/J m 26.6 5.1   8 1.8 0.192 17.3, 30.2 -0.06
DBA/2J f 25.9 7.12   8 2.52 0.275 16.6, 33.9 -0.32
DBA/2J m 25.2 8.32   8 2.94 0.331 16.5, 33.1 -0.42
FVB/NJ f 23.5 3.48   8 1.23 0.148 16.7, 26.6 -0.92
FVB/NJ m 27.1 1.21   7 0.457 0.0447 25.6, 28.9 0.06
KK/HlJ f 29.5 1.93   8 0.683 0.0654 26.3, 31.9 0.58
KK/HlJ m 27.8 2.35   8 0.833 0.0848 23.5, 30.1 0.24
LP/J f 27.5 4.7   6 1.92 0.171 18.4, 31.7 0.08
LP/J m 27.8 4.53   8 1.6 0.163 16.8, 30.4 0.24
MRL/MpJ f 32.0 0.985   6 0.402 0.0308 30.8, 33.1 1.2
MRL/MpJ m 28.2 5.39   8 1.91 0.191 18.2, 34.0 0.34
NOD.B10Sn-H2b/J f 27.9 4.06   6 1.66 0.145 19.8, 30.8 0.18
NOD.B10Sn-H2b/J m 27.8 1.75   4 0.877 0.0632 26.0, 30.0 0.24
NON/ShiLtJ f 23.2 4.69   8 1.66 0.202 14.9, 28.7 -0.99
NON/ShiLtJ m 25.7 6.51   8 2.3 0.253 16.3, 32.8 -0.29
NZO/HlLtJ f 32.1 1.4   8 0.494 0.0435 30.6, 34.5 1.23
NZO/HlLtJ m 30.2 1.95   7 0.736 0.0645 27.4, 32.8 0.84
NZW/LacJ f 31.6 2.15   8 0.759 0.068 28.6, 34.5 1.1
NZW/LacJ m 30.2 5.16   7 1.95 0.171 18.8, 34.3 0.84
P/J f 20.3 2.9   5 1.3 0.143 18.3, 25.2 -1.71
P/J m 19.1 1.96   7 0.742 0.103 16.8, 21.6 -1.95
PL/J f 28.5 4.49   10 1.42 0.157 20.4, 34.2 0.33
PL/J m 30.8 2.48   5 1.11 0.0806 28.2, 34.3 0.99
RIIIS/J f 28.8 5.31   8 1.88 0.184 20.3, 37.7 0.41
RIIIS/J m 29.3 4.44   7 1.68 0.151 22.9, 37.1 0.62
SJL/J f 28.4 1.42   8 0.503 0.05 27.2, 31.1 0.31
SJL/J m 26.7 3.96   8 1.4 0.148 17.1, 29.2 -0.04
SM/J f 23.1 3.66   8 1.29 0.158 17.3, 27.6 -1.01
SM/J m 23.8 5.71   8 2.02 0.24 18.0, 29.8 -0.77
SWR/J f 28.7 3.6   8 1.27 0.126 20.2, 32.0 0.38
SWR/J m 31.7 2.06   8 0.727 0.0648 27.4, 34.7 1.22


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 26.475 1.4044 29.2371 23.7129
129S1/SvImJ m 28.4429 1.5013 31.3957 25.49
A/J f 28.6625 1.4044 31.4246 25.9004
A/J m 28.0 1.4044 30.7621 25.2379
AKR/J f 22.325 1.4044 25.0871 19.5629
AKR/J m 21.5143 1.5013 24.4671 18.5614
BALB/cByJ f 27.7 1.5013 30.6528 24.7472
BALB/cByJ m 25.85 1.4044 28.6121 23.0879
BUB/BnJ f 16.0286 1.5013 18.9814 13.0757
BUB/BnJ m 18.1286 1.5013 21.0814 15.1757
C3H/HeJ f 20.7125 1.4044 23.4746 17.9504
C3H/HeJ m 16.8571 1.5013 19.81 13.9043
C57BL/10J f 30.0714 1.5013 33.0243 27.1186
C57BL/10J m 26.25 1.4044 29.0121 23.4879
C57BL/6J f 29.375 1.4044 32.1371 26.6129
C57BL/6J m 30.0375 1.4044 32.7996 27.2754
C57BLKS/J f 30.1625 1.4044 32.9246 27.4004
C57BLKS/J m 29.3143 1.5013 32.2671 26.3614
C57BR/cdJ f 31.9286 1.5013 34.8814 28.9757
C57BR/cdJ m 31.2857 1.5013 34.2386 28.3329
C57L/J f 30.7 1.4044 33.4621 27.9379
C57L/J m 31.325 1.4044 34.0871 28.5629
CBA/J f 25.9857 1.5013 28.9386 23.0329
CBA/J m 26.6125 1.4044 29.3746 23.8504
DBA/2J f 25.8875 1.4044 28.6496 23.1254
DBA/2J m 25.1625 1.4044 27.9246 22.4004
FVB/NJ f 23.475 1.4044 26.2371 20.7129
FVB/NJ m 27.0571 1.5013 30.01 24.1043
KK/HlJ f 29.5125 1.4044 32.2746 26.7504
KK/HlJ m 27.7625 1.4044 30.5246 25.0004
LP/J f 27.55 1.6216 30.7394 24.3606
LP/J m 27.85 1.4044 30.6121 25.0879
MRL/MpJ f 32.0333 1.6216 35.2228 28.8439
MRL/MpJ m 28.175 1.4044 30.9371 25.4129
NOD.B10Sn-H2b/J f 27.8833 1.6216 31.0728 24.6939
NOD.B10Sn-H2b/J m 27.75 1.9861 31.6562 23.8438
NON/ShiLtJ f 23.175 1.4044 25.9371 20.4129
NON/ShiLtJ m 25.675 1.4044 28.4371 22.9129
NZO/HlLtJ f 32.15 1.4044 34.9121 29.3879
NZO/HlLtJ m 30.1714 1.5013 33.1243 27.2186
NZW/LacJ f 31.55 1.4044 34.3121 28.7879
NZW/LacJ m 30.2143 1.5013 33.1671 27.2614
P/J f 20.28 1.7764 23.7739 16.7861
P/J m 19.1143 1.5013 22.0671 16.1614
PL/J f 28.54 1.2561 31.0105 26.0695
PL/J m 30.8 1.7764 34.2939 27.3061
RIIIS/J f 28.825 1.4044 31.5871 26.0629
RIIIS/J m 29.3429 1.5013 32.2957 26.39
SJL/J f 28.4375 1.4044 31.1996 25.6754
SJL/J m 26.6875 1.4044 29.4496 23.9254
SM/J f 23.15 1.4044 25.9121 20.3879
SM/J m 23.775 1.4044 26.5371 21.0129
SWR/J f 28.6875 1.4044 31.4496 25.9254
SWR/J m 31.7375 1.4044 34.4996 28.9754


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 27.4589 1.0279 29.4806 25.4373
A/J both 28.3312 0.993 30.2844 26.3781
AKR/J both 21.9196 1.0279 23.9413 19.898
BALB/cByJ both 26.775 1.0279 28.7967 24.7533
BUB/BnJ both 17.0786 1.0616 19.1665 14.9906
C3H/HeJ both 18.7848 1.0279 20.8065 16.7631
C57BL/10J both 28.1607 1.0279 30.1824 26.139
C57BL/6J both 29.7062 0.993 31.6594 27.7531
C57BLKS/J both 29.7384 1.0279 31.7601 27.7167
C57BR/cdJ both 31.6071 1.0616 33.6951 29.5192
C57L/J both 31.0125 0.993 32.9656 29.0594
CBA/J both 26.2991 1.0279 28.3208 24.2774
DBA/2J both 25.525 0.993 27.4781 23.5719
FVB/NJ both 25.2661 1.0279 27.2877 23.2444
KK/HlJ both 28.6375 0.993 30.5906 26.6844
LP/J both 27.7 1.0726 29.8096 25.5904
MRL/MpJ both 30.1042 1.0726 32.2138 27.9946
NOD.B10Sn-H2b/J both 27.8167 1.282 30.3381 25.2952
NON/ShiLtJ both 24.425 0.993 26.3781 22.4719
NZO/HlLtJ both 31.1607 1.0279 33.1824 29.139
NZW/LacJ both 30.8821 1.0279 32.9038 28.8605
P/J both 19.6971 1.1629 21.9844 17.4099
PL/J both 29.67 1.0878 31.8095 27.5305
RIIIS/J both 29.0839 1.0279 31.1056 27.0623
SJL/J both 27.5625 0.993 29.5156 25.6094
SM/J both 23.4625 0.993 25.4156 21.5094
SWR/J both 30.2125 0.993 32.1656 28.2594




  GWAS USING LINEAR MIXED MODELS

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