Phenotype measure:   Evsikova1   food_Dk

ID, description, units MPD:24763   food_Dk   food intake   [g]  dark
Data set, strains Evsikova1   inbred   14 strains     sex: both     age: 26wks
Procedure intake monitoring
Ontology mappings

  STRAIN COMPARISON PLOT
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Evsikova1 - food intake dark



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested12 strains12 strains
Mean of the strain means2.13   g 2.50   g
Median of the strain means2.03   g 2.55   g
SD of the strain means± 0.355 ± 0.404
Coefficient of variation (CV)0.167 0.162
Min–max range of strain means1.72   –   3.00   g 1.82   –   3.11   g
Mean sample size per strain6.3   mice 5.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 3.3327 3.3327 7.7776 0.0064
strain 8 7.3341 0.9168 2.1395 0.0394
sex:strain 8 7.4425 0.9303 2.1711 0.0366
Residuals 94 40.2791 0.4285


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 2.07 0.494   7 0.187 0.238 1.24, 2.63 -0.17
129S1/SvImJ m 2.36 0.655   8 0.232 0.277 1.45, 3.42 -0.35
A/J f 2.57 1.05   7 0.395 0.406 1.15, 4.27 1.24
A/J m 2.74 0.368   2   0.26 0.134 2.48, 3.0 0.59
AKR/J f 1.95 0.727   4 0.364 0.373 0.93, 2.62 -0.5
AKR/J m 1.82 0.0   1   0.0 0.0 1.82, 1.82 -1.68
BALB/cByJ f 2.17 0.491   8 0.173 0.226 1.26, 2.66 0.11
BALB/cByJ m 3.09 0.95   6 0.388 0.307 1.26, 3.79 1.46
BTBR T+ Itpr3tf/J f 2.31 0.625   3 0.361 0.27 1.68, 2.93 0.51
BTBR T+ Itpr3tf/J m 3.11 0.935   4 0.468 0.3 1.81, 3.96 1.51
BUB/BnJ f 1.98 0.712   7 0.269 0.359 0.72, 2.78 -0.42
BUB/BnJ m 2.58 0.24   6 0.0979 0.0929 2.3, 2.92 0.2
C3H/HeJ m 2.53 0.319   8 0.113 0.126 2.1, 2.97 0.07
C57BL/10J f 1.83 0.374   7 0.141 0.205 1.21, 2.32 -0.84
C57BL/6J f 1.72 0.662   8 0.234 0.385 0.53, 2.4 -1.15
C57BL/6J m 2.69 0.786   6 0.321 0.292 1.33, 3.63 0.47
C57BLKS/J f 1.99 0.373   5 0.167 0.188 1.52, 2.33 -0.39
C57BLKS/J m 2.59 0.618   12 0.178 0.239 0.85, 3.3 0.22
C57BR/cdJ f 3.0 0.396   8 0.14 0.132 2.49, 3.5 2.45
C57BR/cdJ m 2.37 0.639   7 0.241 0.27 1.07, 3.0 -0.32
C57L/J f 2.09 0.531   3 0.307 0.254 1.73, 2.7 -0.11
C57L/J m 1.86 0.537   5 0.24 0.289 1.2, 2.48 -1.58
CAST/EiJ f 1.87 0.438   7 0.166 0.234 1.02, 2.35 -0.73
CBA/J m 2.26 0.586   5 0.262 0.26 1.38, 2.81 -0.59


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 2.0714 0.2474 2.5627 1.5802
129S1/SvImJ m 2.3625 0.2314 2.822 1.903
A/J f 2.5743 0.2474 3.0655 2.083
A/J m 2.74 0.4629 3.659 1.821
BALB/cByJ f 2.17 0.2314 2.6295 1.7105
BALB/cByJ m 3.09 0.2672 3.6206 2.5594
BTBR T+ Itpr3tf/J f 2.3133 0.3779 3.0637 1.5629
BTBR T+ Itpr3tf/J m 3.1125 0.3273 3.7624 2.4626
BUB/BnJ f 1.9814 0.2474 2.4727 1.4902
BUB/BnJ m 2.5833 0.2672 3.1139 2.0527
C57BL/6J f 1.7188 0.2314 2.1783 1.2592
C57BL/6J m 2.6917 0.2672 3.2223 2.1611
C57BLKS/J f 1.986 0.2927 2.5673 1.4047
C57BLKS/J m 2.5883 0.189 2.9635 2.2131
C57BR/cdJ f 2.9987 0.2314 3.4583 2.5392
C57BR/cdJ m 2.3686 0.2474 2.8598 1.8773
C57L/J f 2.09 0.3779 2.8404 1.3396
C57L/J m 1.858 0.2927 2.4393 1.2767


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 2.217 0.1694 2.5533 1.8806
A/J both 2.6571 0.2624 3.1782 2.1361
BALB/cByJ both 2.63 0.1768 2.981 2.279
BTBR T+ Itpr3tf/J both 2.7129 0.25 3.2093 2.2166
BUB/BnJ both 2.2824 0.1821 2.6439 1.9208
C57BL/6J both 2.2052 0.1768 2.5562 1.8542
C57BLKS/J both 2.2872 0.1742 2.6331 1.9413
C57BR/cdJ both 2.6837 0.1694 3.02 2.3473
C57L/J both 1.974 0.239 2.4486 1.4994




  GWAS USING LINEAR MIXED MODELS