Phenotype measure:   Evsikova1   food_Lt

ID, description, units MPD:24762   food_Lt   food intake   [g]  light
Data set, strains Evsikova1   inbred   14 strains     sex: both     age: 26wks
Procedure intake monitoring
Ontology mappings

  STRAIN COMPARISON PLOT
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Evsikova1 - food intake light



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested12 strains12 strains
Mean of the strain means0.770   g 0.758   g
Median of the strain means0.855   g 0.726   g
SD of the strain means± 0.414 ± 0.503
Coefficient of variation (CV)0.538 0.664
Min–max range of strain means0.123   –   1.73   g 0.185   –   2.03   g
Mean sample size per strain6.3   mice 5.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.2153 0.2153 0.7455 0.3901
strain 8 14.156 1.7695 6.1281 < 0.0001
sex:strain 8 5.9532 0.7441 2.5771 0.0137
Residuals 94 27.1426 0.2888


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.463 0.191   7 0.0721 0.412 0.18, 0.77 -0.74
129S1/SvImJ m 0.816 0.25   8 0.0884 0.306 0.51, 1.2 0.12
A/J f 0.56 1.13   7 0.428 2.02 0.01, 3.12 -0.51
A/J m 0.185 0.148   2   0.105 0.803 0.08, 0.29 -1.14
AKR/J f 0.243 0.254   4 0.127 1.05 0.07, 0.62 -1.27
AKR/J m 0.28 0.0   1   0.0 0.0 0.28, 0.28 -0.95
BALB/cByJ f 1.73 0.774   8 0.274 0.447 0.88, 3.42 2.32
BALB/cByJ m 1.18 0.502   6 0.205 0.426 0.5, 2.02 0.84
BTBR T+ Itpr3tf/J f 0.86 0.243   3 0.14 0.283 0.7, 1.14 0.22
BTBR T+ Itpr3tf/J m 0.71 0.327   4 0.163 0.46 0.23, 0.96 -0.1
BUB/BnJ f 0.927 0.556   7 0.21 0.6 0.24, 1.7 0.38
BUB/BnJ m 2.03 0.334   6 0.136 0.165 1.38, 2.36 2.53
C3H/HeJ m 0.591 0.231   8 0.0817 0.391 0.29, 0.97 -0.33
C57BL/10J f 0.859 0.281   7 0.106 0.327 0.4, 1.25 0.22
C57BL/6J f 0.72 0.368   8 0.13 0.511 -0.12
C57BL/6J m 1.03 0.471   6 0.192 0.457 0.43, 1.86 0.54
C57BLKS/J f 0.856 0.582   5 0.26 0.68 0.1, 1.66 0.21
C57BLKS/J m 0.779 0.616   12 0.178 0.791 0.2, 2.55 0.04
C57BR/cdJ f 0.854 0.343   8 0.121 0.402 0.5, 1.6 0.2
C57BR/cdJ m 0.741 0.509   7 0.192 0.686 0.13, 1.63 -0.03
C57L/J f 0.123 0.1   3 0.0578 0.812 0.02, 0.22 -1.56
C57L/J m 0.506 0.337   5 0.151 0.666 -0.5
CAST/EiJ f 1.04 0.238   7 0.09 0.23 0.79, 1.53 0.65
CBA/J m 0.246 0.216   5 0.0964 0.876 0.06, 0.56 -1.02


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.4629 0.2031 0.8661 0.0596
129S1/SvImJ m 0.8162 0.19 1.1935 0.439
A/J f 0.56 0.2031 0.9633 0.1567
A/J m 0.185 0.38 0.9394 0.0
BALB/cByJ f 1.7325 0.19 2.1097 1.3553
BALB/cByJ m 1.18 0.2194 1.6156 0.7444
BTBR T+ Itpr3tf/J f 0.86 0.3102 1.476 0.244
BTBR T+ Itpr3tf/J m 0.71 0.2687 1.2435 0.1765
BUB/BnJ f 0.9271 0.2031 1.3304 0.5239
BUB/BnJ m 2.0267 0.2194 2.4622 1.5911
C57BL/6J f 0.72 0.19 1.0972 0.3428
C57BL/6J m 1.0317 0.2194 1.4672 0.5961
C57BLKS/J f 0.856 0.2403 1.3331 0.3789
C57BLKS/J m 0.7792 0.1551 1.0872 0.4712
C57BR/cdJ f 0.8537 0.19 1.231 0.4765
C57BR/cdJ m 0.7414 0.2031 1.1447 0.3382
C57L/J f 0.1233 0.3102 0.7393 0.0
C57L/J m 0.506 0.2403 0.9831 0.0289


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.6396 0.1391 0.9156 0.3635
A/J both 0.3725 0.2154 0.8002 0.0
BALB/cByJ both 1.4563 0.1451 1.7444 1.1681
BTBR T+ Itpr3tf/J both 0.785 0.2052 1.1924 0.3776
BUB/BnJ both 1.4769 0.1495 1.7737 1.1801
C57BL/6J both 0.8758 0.1451 1.1639 0.5877
C57BLKS/J both 0.8176 0.143 1.1015 0.5336
C57BR/cdJ both 0.7976 0.1391 1.0737 0.5215
C57L/J both 0.3147 0.1962 0.7043 0.0




  GWAS USING LINEAR MIXED MODELS