Project measure / variable:   Yuan3   BUN_M06

ID, description, units MPD:24481   BUN_M06   blood urea nitrogen (plasma BUN)   [mg/dL]  at age 6mo  
Data set, strains Yuan3   inbred   31 strains     sex: both     age: 26wks
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  STRAIN COMPARISON PLOT
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Yuan3 - blood urea nitrogen (plasma BUN) at age 6mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested29 strains26 strains
Mean of the strain means23.8   mg/dL 25.3   mg/dL
Median of the strain means23.8   mg/dL 24.9   mg/dL
SD of the strain means± 2.72 ± 3.92
Coefficient of variation (CV)0.114 0.155
Min–max range of strain means19.3   –   28.9   mg/dL 18.3   –   33.0   mg/dL
Mean sample size per strain7.0   mice 7.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 184.8034 184.8034 19.1481 < 0.0001
strain 22 2341.1524 106.416 11.0261 < 0.0001
sex:strain 22 926.7335 42.1243 4.3646 < 0.0001
Residuals 306 2953.2851 9.6513


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 19.8 1.28   8 0.453 0.0649 18.0, 22.0 -1.48
129S1/SvImJ m 24.9 2.59   8 0.915 0.104 20.0, 29.0 -0.1
A/J f 19.3 0.488   7 0.184 0.0253 19.0, 20.0 -1.67
A/J m 26.4 2.83   8 0.999 0.107 23.0, 31.0 0.28
AKR/J f 21.5 1.76   6 0.719 0.0819 19.0, 24.0 -0.86
BALB/cByJ f 24.6 3.7   8 1.31 0.15 20.0, 32.0 0.28
BALB/cByJ m 22.1 3.83   8 1.36 0.173 16.0, 29.0 -0.82
BTBR T+ Itpr3tf/J f 20.4 2.56   8 0.905 0.126 15.0, 23.0 -1.26
BTBR T+ Itpr3tf/J m 24.9 1.46   8 0.515 0.0586 23.0, 28.0 -0.1
BUB/BnJ f 24.1 5.27   7 1.99 0.218 19.0, 33.0 0.1
BUB/BnJ m 29.5 4.38   8 1.55 0.148 23.0, 37.0 1.07
C3H/HeJ f 19.6 2.07   8 0.73 0.105 16.0, 23.0 -1.56
C3H/HeJ m 21.1 3.03   16 0.758 0.143 16.0, 29.0 -1.07
C57BL/10J f 25.5 4.55   6 1.86 0.178 21.0, 32.0 0.61
C57BL/10J m 28.4 1.3   8 0.46 0.0459 26.0, 30.0 0.79
C57BL/6J f 27.8 2.5   4 1.25 0.0901 25.0, 31.0 1.46
C57BL/6J m 33.0 0.0   1   0.0 0.0 33.0, 33.0 1.96
C57BLKS/J f 23.6 4.81   8 1.7 0.204 18.0, 33.0 -0.09
C57BLKS/J m 21.4 4.35   7 1.65 0.203 17.0, 30.0 -0.99
C57BR/cdJ f 20.8 2.87   8 1.01 0.138 17.0, 26.0 -1.12
C57BR/cdJ m 21.8 1.58   8 0.559 0.0727 19.0, 23.0 -0.89
CAST/EiJ f 24.8 8.58   5 3.84 0.346 16.0, 34.0 0.36
CBA/J m 19.4 0.916   8 0.324 0.0473 18.0, 21.0 -1.5
DBA/2J f 22.9 1.46   8 0.515 0.0637 20.0, 25.0 -0.34
DBA/2J m 28.0 4.97   7 1.88 0.177 21.0, 34.0 0.69
FVB/NJ f 28.5 2.73   8 0.964 0.0956 25.0, 32.0 1.72
FVB/NJ m 24.0 2.38   7 0.9 0.0992 20.0, 27.0 -0.33
KK/HlJ f 19.6 1.92   8 0.68 0.098 17.0, 22.0 -1.56
LP/J f 23.8 2.59   5 1.16 0.109 20.0, 27.0 -0.01
LP/J m 18.3 1.15   3 0.667 0.063 17.0, 19.0 -1.78
MOLF/EiJ f 26.9 3.98   7 1.5 0.148 21.0, 32.0 1.13
MOLF/EiJ m 26.8 3.41   8 1.21 0.128 22.0, 32.0 0.38
MRL/MpJ m 23.4 3.46   8 1.22 0.148 19.0, 29.0 -0.48
NOD.B10Sn-H2b/J f 27.0 3.65   4 1.83 0.135 23.0, 31.0 1.17
NON/ShiLtJ f 28.9 3.18   8 1.12 0.11 23.0, 34.0 1.87
NON/ShiLtJ m 32.8 3.45   8 1.22 0.105 26.0, 36.0 1.91
NZO/HlLtJ f 22.4 2.13   8 0.754 0.0954 19.0, 26.0 -0.53
NZO/HlLtJ m 23.9 3.09   8 1.09 0.129 21.0, 31.0 -0.36
NZW/LacJ f 24.2 2.25   8 0.796 0.0929 20.0, 27.0 0.14
NZW/LacJ m 29.9 2.34   7 0.884 0.0784 27.0, 33.0 1.17
P/J f 26.5 2.66   6 1.09 0.101 22.0, 30.0 0.98
PL/J f 24.9 2.04   7 0.769 0.0819 23.0, 29.0 0.39
PL/J m 21.4 1.39   14 0.372 0.0652 19.0, 24.0 -0.99
PWD/PhJ f 25.0 1.29   7 0.488 0.0516 23.0, 27.0 0.43
PWD/PhJ m 30.3 3.01   6 1.23 0.0993 26.0, 34.0 1.28
RIIIS/J f 23.5 4.32   6 1.77 0.184 18.0, 28.0 -0.12
RIIIS/J m 26.8 2.87   8 1.01 0.107 23.0, 30.0 0.38
SJL/J f 23.2 4.37   8 1.54 0.188 16.0, 30.0 -0.23
SJL/J m 25.2 4.88   6 1.99 0.194 19.0, 32.0 -0.02
SM/J f 26.1 3.19   16 0.798 0.123 19.0, 31.0 0.84
SM/J m 27.7 2.29   7 0.865 0.0826 23.0, 30.0 0.61
SWR/J f 23.4 3.54   8 1.25 0.152 18.0, 29.0 -0.16
SWR/J m 24.8 3.41   8 1.21 0.138 20.0, 31.0 -0.13
WSB/EiJ f 22.5 2.12   2   1.5 0.0943 21.0, 24.0 -0.49
WSB/EiJ m 21.5 0.707   2   0.5 0.0329 21.0, 22.0 -0.97


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 19.75 1.0984 21.9113 17.5887
129S1/SvImJ m 24.875 1.0984 27.0363 22.7137
A/J f 19.2857 1.1742 21.5962 16.9752
A/J m 26.375 1.0984 28.5363 24.2137
BALB/cByJ f 24.625 1.0984 26.7863 22.4637
BALB/cByJ m 22.125 1.0984 24.2863 19.9637
BTBR T+ Itpr3tf/J f 20.375 1.0984 22.5363 18.2137
BTBR T+ Itpr3tf/J m 24.875 1.0984 27.0363 22.7137
BUB/BnJ f 24.1429 1.1742 26.4534 21.8323
BUB/BnJ m 29.5 1.0984 31.6613 27.3387
C3H/HeJ f 19.625 1.0984 21.7863 17.4637
C3H/HeJ m 21.125 0.7767 22.6533 19.5967
C57BL/10J f 25.5 1.2683 27.9957 23.0043
C57BL/10J m 28.375 1.0984 30.5363 26.2137
C57BLKS/J f 23.625 1.0984 25.7863 21.4637
C57BLKS/J m 21.4286 1.1742 23.7391 19.118
C57BR/cdJ f 20.75 1.0984 22.9113 18.5887
C57BR/cdJ m 21.75 1.0984 23.9113 19.5887
DBA/2J f 22.875 1.0984 25.0363 20.7137
DBA/2J m 28.0 1.1742 30.3105 25.6895
FVB/NJ f 28.5 1.0984 30.6613 26.3387
FVB/NJ m 24.0 1.1742 26.3105 21.6895
LP/J f 23.8 1.3893 26.5339 21.0661
LP/J m 18.3333 1.7936 21.8627 14.8039
MOLF/EiJ f 26.8571 1.1742 29.1677 24.5466
MOLF/EiJ m 26.75 1.0984 28.9113 24.5887
NON/ShiLtJ f 28.875 1.0984 31.0363 26.7137
NON/ShiLtJ m 32.75 1.0984 34.9113 30.5887
NZO/HlLtJ f 22.375 1.0984 24.5363 20.2137
NZO/HlLtJ m 23.875 1.0984 26.0363 21.7137
NZW/LacJ f 24.25 1.0984 26.4113 22.0887
NZW/LacJ m 29.8571 1.1742 32.1677 27.5466
PL/J f 24.8571 1.1742 27.1677 22.5466
PL/J m 21.3571 0.8303 22.9909 19.7233
PWD/PhJ f 25.0 1.1742 27.3105 22.6895
PWD/PhJ m 30.3333 1.2683 32.829 27.8377
RIIIS/J f 23.5 1.2683 25.9957 21.0043
RIIIS/J m 26.75 1.0984 28.9113 24.5887
SJL/J f 23.25 1.0984 25.4113 21.0887
SJL/J m 25.1667 1.2683 27.6623 22.671
SM/J f 26.0625 0.7767 27.5908 24.5342
SM/J m 27.7143 1.1742 30.0248 25.4038
SWR/J f 23.375 1.0984 25.5363 21.2137
SWR/J m 24.75 1.0984 26.9113 22.5887
WSB/EiJ f 22.5 2.1967 26.8226 18.1774
WSB/EiJ m 21.5 2.1967 25.8226 17.1774


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 22.3125 0.7767 23.8408 20.7842
A/J both 22.8304 0.8039 24.4123 21.2484
BALB/cByJ both 23.375 0.7767 24.9033 21.8467
BTBR T+ Itpr3tf/J both 22.625 0.7767 24.1533 21.0967
BUB/BnJ both 26.8214 0.8039 28.4033 25.2395
C3H/HeJ both 20.375 0.6726 21.6985 19.0515
C57BL/10J both 26.9375 0.8389 28.5882 25.2868
C57BLKS/J both 22.5268 0.8039 24.1087 20.9449
C57BR/cdJ both 21.25 0.7767 22.7783 19.7217
DBA/2J both 25.4375 0.8039 27.0194 23.8556
FVB/NJ both 26.25 0.8039 27.8319 24.6681
LP/J both 21.0667 1.1344 23.2989 18.8345
MOLF/EiJ both 26.8036 0.8039 28.3855 25.2217
NON/ShiLtJ both 30.8125 0.7767 32.3408 29.2842
NZO/HlLtJ both 23.125 0.7767 24.6533 21.5967
NZW/LacJ both 27.0536 0.8039 28.6355 25.4717
PL/J both 23.1071 0.719 24.522 21.6922
PWD/PhJ both 27.6667 0.8642 29.3672 25.9662
RIIIS/J both 25.125 0.8389 26.7757 23.4743
SJL/J both 24.2083 0.8389 25.8591 22.5576
SM/J both 26.8884 0.7039 28.2735 25.5033
SWR/J both 24.0625 0.7767 25.5908 22.5342
WSB/EiJ both 22.0 1.5533 25.0565 18.9435




  GWAS USING LINEAR MIXED MODELS