Phenotype measure:   Peters4   pctBASO_M24

ID, description, units MPD:24352   pctBASO_M24   basophil differential (BASO; percentage of total WBC)   [%]  at age 24mo
Data set, strains Peters4   inbred   13 strains     sex: both     age: 104wks
Procedure complete blood count
Ontology mappings

  STRAIN COMPARISON PLOT
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Peters4 - basophil differential (BASO; percentage of total WBC) at age 24mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested11 strains12 strains
Mean of the strain means0.542   % 0.409   %
Median of the strain means0.500   % 0.387   %
SD of the strain means± 0.180 ± 0.104
Coefficient of variation (CV)0.331 0.255
Min–max range of strain means0.214   –   0.814   % 0.267   –   0.614   %
Mean sample size per strain6.6   mice 6.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1.056 1.056 31.5515 < 0.0001
strain 9 1.8237 0.2026 6.0542 < 0.0001
sex:strain 9 0.6177 0.0686 2.0507 0.0395
Residuals 118 3.9493 0.0335


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.5 0.107   8 0.0378 0.214 0.4, 0.7 -0.23
129S1/SvImJ m 0.467 0.0985   12 0.0284 0.211 0.3, 0.6 0.56
A/J m 0.5 0.141   2   0.1 0.283 0.4, 0.6 0.88
BALB/cByJ f 0.4 0.235   5 0.105 0.586 0.2, 0.8 -0.79
C57BL/10J f 0.7 0.428   7 0.162 0.612 0.3, 1.4 0.88
C57BL/10J m 0.387 0.0991   8 0.035 0.256 0.2, 0.5 -0.21
C57BL/6J f 0.483 0.214   6 0.0872 0.442 0.1, 0.7 -0.33
C57BL/6J m 0.329 0.0756   7 0.0286 0.23 0.2, 0.4 -0.76
C57BLKS/J f 0.583 0.117   6 0.0477 0.2 0.4, 0.7 0.23
C57BLKS/J m 0.343 0.0787   7 0.0297 0.229 0.2, 0.4 -0.63
C57BR/cdJ f 0.814 0.285   7 0.108 0.35 0.5, 1.4 1.52
C57BR/cdJ m 0.417 0.16   6 0.0654 0.384 0.3, 0.7 0.08
LP/J f 0.729 0.214   7 0.0808 0.293 0.4, 1.0 1.04
LP/J m 0.54 0.152   5 0.0678 0.281 0.4, 0.8 1.26
NON/ShiLtJ f 0.214 0.09   7 0.034 0.42 0.1, 0.3 -1.83
NON/ShiLtJ m 0.267 0.225   6 0.0919 0.844 0.1, 0.7 -1.36
NZW/LacJ f 0.683 0.36   6 0.147 0.527 0.3, 1.3 0.79
NZW/LacJ m 0.367 0.0516   6 0.0211 0.141 0.3, 0.4 -0.4
PWD/PhJ f 0.367 0.121   6 0.0494 0.33 0.2, 0.5 -0.97
PWD/PhJ m 0.286 0.107   7 0.0404 0.374 0.1, 0.4 -1.18
SM/J m 0.614 0.313   7 0.118 0.51 0.3, 1.1 1.97
WSB/EiJ f 0.486 0.107   7 0.0404 0.22 0.3, 0.6 -0.31
WSB/EiJ m 0.386 0.107   7 0.0404 0.277 0.2, 0.5 -0.22


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.5 0.0647 0.6281 0.3719
129S1/SvImJ m 0.4667 0.0528 0.5712 0.3621
C57BL/10J f 0.7 0.0691 0.8369 0.5631
C57BL/10J m 0.3875 0.0647 0.5156 0.2594
C57BL/6J f 0.4833 0.0747 0.6312 0.3354
C57BL/6J m 0.3286 0.0691 0.4655 0.1916
C57BLKS/J f 0.5833 0.0747 0.7312 0.4354
C57BLKS/J m 0.3429 0.0691 0.4798 0.2059
C57BR/cdJ f 0.8143 0.0691 0.9512 0.6774
C57BR/cdJ m 0.4167 0.0747 0.5646 0.2688
LP/J f 0.7286 0.0691 0.8655 0.5916
LP/J m 0.54 0.0818 0.702 0.378
NON/ShiLtJ f 0.2143 0.0691 0.3512 0.0774
NON/ShiLtJ m 0.2667 0.0747 0.4146 0.1188
NZW/LacJ f 0.6833 0.0747 0.8312 0.5354
NZW/LacJ m 0.3667 0.0747 0.5146 0.2188
PWD/PhJ f 0.3667 0.0747 0.5146 0.2188
PWD/PhJ m 0.2857 0.0691 0.4226 0.1488
WSB/EiJ f 0.4857 0.0691 0.6226 0.3488
WSB/EiJ m 0.3857 0.0691 0.5226 0.2488


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.4833 0.0418 0.566 0.4007
C57BL/10J both 0.5438 0.0473 0.6375 0.45
C57BL/6J both 0.406 0.0509 0.5067 0.3052
C57BLKS/J both 0.4631 0.0509 0.5639 0.3623
C57BR/cdJ both 0.6155 0.0509 0.7163 0.5147
LP/J both 0.6343 0.0536 0.7404 0.5282
NON/ShiLtJ both 0.2405 0.0509 0.3413 0.1397
NZW/LacJ both 0.525 0.0528 0.6296 0.4204
PWD/PhJ both 0.3262 0.0509 0.427 0.2254
WSB/EiJ both 0.4357 0.0489 0.5325 0.3389




  GWAS USING LINEAR MIXED MODELS