Project measure / variable:   Petkova1   NK_M24

ID, description, units MPD:24279   NK_M24   natural killer (NK) cells, as percentage of total lymphocytes   [%]  at age 24mo  
Data set, strains Petkova1   inbred   12 strains     sex: both     age: 104wks
Procedure immune cell quantification
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  STRAIN COMPARISON PLOT
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Petkova1 - natural killer (NK) cells, as percentage of total lymphocytes at age 24mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested11 strains11 strains
Mean of the strain means3.20   % 4.35   %
Median of the strain means2.69   % 3.29   %
SD of the strain means± 2.12 ± 3.58
Coefficient of variation (CV)0.663 0.824
Min–max range of strain means0.927   –   8.65   % 0.881   –   13.5   %
Mean sample size per strain7.0   mice 7.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 54.9541 54.9541 6.8211 0.0101
strain 9 1010.8458 112.3162 13.9412 < 0.0001
sex:strain 9 118.7437 13.1937 1.6377 0.1119
Residuals 121 974.8294 8.0564


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 2.59 0.96   6 0.392 0.37 1.88, 4.43 -0.29
129S1/SvImJ m 0.881 0.074   7 0.028 0.084 0.76, 0.95 -0.97
BALB/cByJ f 5.09 2.66   7 1.01 0.523 2.42, 9.68 0.89
C3H/HeJ m 3.29 0.762   8 0.269 0.231 2.46, 4.48 -0.29
C57BL/10J f 8.65 4.57   8 1.62 0.528 3.94, 15.9 2.56
C57BL/10J m 13.5 10.1   6 4.14 0.75 5.36, 30.3 2.56
C57BL/6J f 3.5 1.26   8 0.447 0.361 2.55, 5.58 0.14
C57BL/6J m 7.21 3.47   8 1.23 0.482 4.23, 14.4 0.8
C57BLKS/J f 2.19 0.439   6 0.179 0.201 1.68, 2.65 -0.48
C57BLKS/J m 5.26 1.47   7 0.556 0.28 3.18, 7.56 0.26
C57BR/cdJ f 3.37 3.39   7 1.28 1.01 1.44, 10.9 0.08
C57BR/cdJ m 5.28 3.53   9 1.18 0.668 2.76, 14.4 0.26
LP/J f 2.82 1.17   8 0.414 0.415 1.68, 5.45 -0.18
LP/J m 3.14 0.708   6 0.289 0.226 2.38, 4.42 -0.34
NON/ShiLtJ f 2.69 0.815   8 0.288 0.303 1.78, 3.84 -0.24
NON/ShiLtJ m 3.55 0.716   7 0.271 0.202 2.67, 4.58 -0.22
NZW/LacJ f 2.11 0.306   6 0.125 0.145 1.83, 2.65 -0.52
NZW/LacJ m 2.55 0.505   7 0.191 0.198 2.04, 3.32 -0.5
PWD/PhJ f 1.31 1.18   7 0.447 0.902 0.25, 3.86 -0.89
PWD/PhJ m 2.21 0.484   7 0.183 0.219 1.5, 2.94 -0.6
WSB/EiJ f 0.927 0.153   6 0.0625 0.165 0.73, 1.15 -1.07
WSB/EiJ m 0.94 0.124   7 0.0469 0.132 0.76, 1.07 -0.95


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 2.595 1.1588 4.8891 0.3009
129S1/SvImJ m 0.8814 1.0728 3.0053 0.0
C57BL/10J f 8.65 1.0035 10.6367 6.6633
C57BL/10J m 13.5183 1.1588 15.8124 11.2242
C57BL/6J f 3.5025 1.0035 5.4892 1.5158
C57BL/6J m 7.205 1.0035 9.1917 5.2183
C57BLKS/J f 2.1867 1.1588 4.4808 0.0
C57BLKS/J m 5.2586 1.0728 7.3825 3.1347
C57BR/cdJ f 3.3686 1.0728 5.4925 1.2447
C57BR/cdJ m 5.2822 0.9461 7.1553 3.4091
LP/J f 2.8225 1.0035 4.8092 0.8358
LP/J m 3.1367 1.1588 5.4308 0.8426
NON/ShiLtJ f 2.6925 1.0035 4.6792 0.7058
NON/ShiLtJ m 3.55 1.0728 5.6739 1.4261
NZW/LacJ f 2.115 1.1588 4.4091 0.0
NZW/LacJ m 2.5529 1.0728 4.6768 0.4289
PWD/PhJ f 1.3114 1.0728 3.4353 0.0
PWD/PhJ m 2.2086 1.0728 4.3325 0.0847
WSB/EiJ f 0.9267 1.1588 3.2208 0.0
WSB/EiJ m 0.94 1.0728 3.0639 0.0


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1.7382 0.7896 3.3014 0.1751
C57BL/10J both 11.0842 0.7665 12.6016 9.5668
C57BL/6J both 5.3537 0.7096 6.7586 3.9489
C57BLKS/J both 3.7226 0.7896 5.2858 2.1595
C57BR/cdJ both 4.3254 0.7152 5.7413 2.9095
LP/J both 2.9796 0.7665 4.497 1.4622
NON/ShiLtJ both 3.1213 0.7345 4.5754 1.6671
NZW/LacJ both 2.3339 0.7896 3.8971 0.7708
PWD/PhJ both 1.76 0.7586 3.2618 0.2582
WSB/EiJ both 0.9333 0.7896 2.4965 0.0




  GWAS USING LINEAR MIXED MODELS