Project measure / variable:   Petkova1   NK_M12

ID, description, units MPD:24277   NK_M12   natural killer (NK) cells, as percentage of total lymphocytes   [%]  at age 12mo  
Data set, strains Petkova1   inbred   31 strains     sex: both     age: 52wks
Procedure immune cell quantification
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  STRAIN COMPARISON PLOT
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Petkova1 - natural killer (NK) cells, as percentage of total lymphocytes at age 12mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested30 strains30 strains
Mean of the strain means3.57   % 3.59   %
Median of the strain means2.50   % 2.78   %
SD of the strain means± 2.80 ± 2.66
Coefficient of variation (CV)0.783 0.742
Min–max range of strain means0.207   –   10.7   % 0.282   –   11.5   %
Mean sample size per strain7.6   mice 7.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 11.656 11.656 5.009 0.0258
strain 28 2452.9161 87.6041 37.6466 < 0.0001
sex:strain 28 485.2298 17.3296 7.4472 < 0.0001
Residuals 389 905.2089 2.327


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 1.98 0.254   8 0.0899 0.128 1.74, 2.49 -0.57
129S1/SvImJ m 4.52 0.53   8 0.188 0.117 3.86, 5.32 0.35
A/J f 1.87 0.29   8 0.103 0.155 1.58, 2.26 -0.61
A/J m 3.13 0.626   8 0.221 0.2 1.98, 4.03 -0.17
AKR/J m 9.68 7.35   5 3.29 0.759 4.25, 22.3 2.29
BALB/cByJ f 2.28 0.523   8 0.185 0.229 1.79, 3.46 -0.46
BALB/cByJ m 4.35 0.485   8 0.172 0.112 3.78, 5.07 0.29
BTBR T+ Itpr3tf/J f 2.72 0.614   8 0.217 0.226 1.79, 3.87 -0.3
BTBR T+ Itpr3tf/J m 2.17 0.358   7 0.135 0.164 1.82, 2.87 -0.53
BUB/BnJ f 1.62 0.264   6 0.108 0.163 1.35, 1.98 -0.7
BUB/BnJ m 1.41 0.509   9 0.17 0.362 0.79, 2.52 -0.82
C3H/HeJ f 10.7 4.03   8 1.42 0.377 6.14, 19.0 2.55
C3H/HeJ m 8.32 2.58   8 0.912 0.31 4.89, 13.1 1.78
C57BL/10J f 7.79 3.72   8 1.31 0.477 4.94, 15.2 1.51
C57BL/10J m 2.68 0.458   7 0.173 0.171 1.81, 3.05 -0.34
C57BL/6J f 9.21 4.12   8 1.46 0.448 5.01, 17.7 2.02
C57BL/6J m 4.31 0.43   8 0.152 0.0998 3.65, 4.82 0.27
C57BLKS/J f 3.81 1.05   8 0.37 0.275 2.1, 4.77 0.09
C57BLKS/J m 3.55 0.503   8 0.178 0.142 2.72, 4.39 -0.01
C57BR/cdJ f 4.07 0.798   8 0.282 0.196 2.83, 5.31 0.18
C57BR/cdJ m 2.63 0.418   8 0.148 0.159 1.82, 3.19 -0.36
C57L/J f 7.32 1.58   7 0.596 0.215 5.48, 10.4 1.34
C57L/J m 7.0 0.958   8 0.339 0.137 5.56, 8.6 1.28
CAST/EiJ f 1.03 0.0764   3 0.0441 0.0744 0.96, 1.11 -0.91
CBA/J f 4.65 2.66   8 0.939 0.571 2.59, 9.84 0.39
CBA/J m 6.08 1.93   8 0.681 0.317 3.64, 9.12 0.93
DBA/2J f 1.51 0.541   6 0.221 0.358 0.85, 2.21 -0.74
DBA/2J m 1.53 0.939   7 0.355 0.614 0.94, 3.54 -0.77
FVB/NJ f 3.72 0.763   8 0.27 0.205 2.91, 4.9 0.05
FVB/NJ m 2.94 0.848   8 0.3 0.288 2.16, 4.36 -0.24
KK/HlJ f 3.64 0.527   8 0.186 0.145 2.82, 4.58 0.03
KK/HlJ m 4.43 1.01   8 0.358 0.229 3.67, 6.84 0.32
LP/J f 3.22 1.37   7 0.517 0.424 1.79, 5.88 -0.13
LP/J m 5.46 3.58   8 1.27 0.656 2.44, 13.9 0.7
MOLF/EiJ f 0.207 0.0256   7 0.00969 0.124 0.17, 0.24 -1.2
MOLF/EiJ m 0.282 0.159   9 0.053 0.564 0.14, 0.68 -1.24
MRL/MpJ f 7.14 2.59   8 0.917 0.363 2.54, 10.7 1.28
MRL/MpJ m 1.94 0.888   8 0.314 0.457 1.11, 3.62 -0.62
NON/ShiLtJ f 4.48 0.87   8 0.307 0.194 3.47, 6.0 0.33
NON/ShiLtJ m 2.58 0.747   6 0.305 0.289 1.98, 4.02 -0.38
NZO/HlLtJ f 8.01 4.15   7 1.57 0.518 4.88, 17.1 1.59
NZO/HlLtJ m 11.5 3.33   7 1.26 0.29 7.12, 16.1 2.97
NZW/LacJ f 2.09 0.233   8 0.0823 0.111 1.75, 2.46 -0.53
NZW/LacJ m 2.87 0.691   8 0.244 0.24 1.92, 3.82 -0.27
P/J f 1.71 0.218   8 0.0771 0.128 1.44, 2.08 -0.67
P/J m 2.37 0.236   7 0.0893 0.0997 2.13, 2.81 -0.46
PL/J f 0.694 0.291   7 0.11 0.419 0.44, 1.26 -1.03
PL/J m 0.767 0.281   6 0.115 0.366 0.41, 1.2 -1.06
PWD/PhJ f 1.02 0.203   8 0.0717 0.198 0.81, 1.36 -0.91
PWD/PhJ m 1.28 0.207   8 0.0731 0.162 1.05, 1.67 -0.87
RIIIS/J f 1.33 0.139   8 0.0491 0.105 1.17, 1.57 -0.8
RIIIS/J m 1.63 0.555   8 0.196 0.34 1.14, 2.78 -0.74
SJL/J f 1.5 0.557   8 0.197 0.371 0.83, 2.46 -0.74
SJL/J m 2.46 1.59   9 0.53 0.647 1.19, 5.96 -0.42
SM/J f 5.2 0.61   8 0.216 0.117 3.83, 5.82 0.58
SM/J m 3.24 0.967   8 0.342 0.298 1.83, 4.37 -0.13
SWR/J f 0.673 0.0607   7 0.023 0.0903 0.59, 0.75 -1.04
SWR/J m 0.783 0.208   7 0.0787 0.266 0.52, 1.11 -1.05
WSB/EiJ f 1.89 0.415   8 0.147 0.219 1.23, 2.28 -0.6
WSB/EiJ m 1.79 0.475   8 0.168 0.266 1.29, 2.81 -0.68


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 1.9787 0.5393 3.0391 0.9184
129S1/SvImJ m 4.5212 0.5393 5.5816 3.4609
A/J f 1.8725 0.5393 2.9329 0.8121
A/J m 3.125 0.5393 4.1854 2.0646
BALB/cByJ f 2.285 0.5393 3.3454 1.2246
BALB/cByJ m 4.3487 0.5393 5.4091 3.2884
BTBR T+ Itpr3tf/J f 2.7187 0.5393 3.7791 1.6584
BTBR T+ Itpr3tf/J m 2.1743 0.5766 3.3079 1.0407
BUB/BnJ f 1.6233 0.6228 2.8477 0.3989
BUB/BnJ m 1.4089 0.5085 2.4086 0.4092
C3H/HeJ f 10.6875 0.5393 11.7479 9.6271
C3H/HeJ m 8.3212 0.5393 9.3816 7.2609
C57BL/10J f 7.7925 0.5393 8.8529 6.7321
C57BL/10J m 2.68 0.5766 3.8136 1.5464
C57BL/6J f 9.2087 0.5393 10.2691 8.1484
C57BL/6J m 4.3075 0.5393 5.3679 3.2471
C57BLKS/J f 3.8075 0.5393 4.8679 2.7471
C57BLKS/J m 3.5475 0.5393 4.6079 2.4871
C57BR/cdJ f 4.0737 0.5393 5.1341 3.0134
C57BR/cdJ m 2.6312 0.5393 3.6916 1.5709
C57L/J f 7.3229 0.5766 8.4564 6.1893
C57L/J m 7.0025 0.5393 8.0629 5.9421
CBA/J f 4.6463 0.5393 5.7066 3.5859
CBA/J m 6.0763 0.5393 7.1366 5.0159
DBA/2J f 1.5083 0.6228 2.7327 0.2839
DBA/2J m 1.53 0.5766 2.6636 0.3964
FVB/NJ f 3.715 0.5393 4.7754 2.6546
FVB/NJ m 2.9387 0.5393 3.9991 1.8784
KK/HlJ f 3.6437 0.5393 4.7041 2.5834
KK/HlJ m 4.43 0.5393 5.4904 3.3696
LP/J f 3.2243 0.5766 4.3579 2.0907
LP/J m 5.4637 0.5393 6.5241 4.4034
MOLF/EiJ f 0.2071 0.5766 1.3407 0.0
MOLF/EiJ m 0.2822 0.5085 1.2819 0.0
MRL/MpJ f 7.14 0.5393 8.2004 6.0796
MRL/MpJ m 1.9425 0.5393 3.0029 0.8821
NON/ShiLtJ f 4.48 0.5393 5.5404 3.4196
NON/ShiLtJ m 2.5833 0.6228 3.8077 1.3589
NZO/HlLtJ f 8.0114 0.5766 9.145 6.8778
NZO/HlLtJ m 11.5014 0.5766 12.635 10.3678
NZW/LacJ f 2.0887 0.5393 3.1491 1.0284
NZW/LacJ m 2.8737 0.5393 3.9341 1.8134
P/J f 1.705 0.5393 2.7654 0.6446
P/J m 2.37 0.5766 3.5036 1.2364
PL/J f 0.6943 0.5766 1.8279 0.0
PL/J m 0.7667 0.6228 1.9911 0.0
PWD/PhJ f 1.025 0.5393 2.0854 0.0
PWD/PhJ m 1.2787 0.5393 2.3391 0.2184
RIIIS/J f 1.3288 0.5393 2.3891 0.2684
RIIIS/J m 1.6313 0.5393 2.6916 0.5709
SJL/J f 1.5 0.5393 2.5604 0.4396
SJL/J m 2.4567 0.5085 3.4564 1.4569
SM/J f 5.1975 0.5393 6.2579 4.1371
SM/J m 3.2412 0.5393 4.3016 2.1809
SWR/J f 0.6729 0.5766 1.8064 0.0
SWR/J m 0.7829 0.5766 1.9164 0.0
WSB/EiJ f 1.8887 0.5393 2.9491 0.8284
WSB/EiJ m 1.785 0.5393 2.8454 0.7246


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 3.25 0.3814 3.9998 2.5002
A/J both 2.4987 0.3814 3.2485 1.749
BALB/cByJ both 3.3169 0.3814 4.0667 2.5671
BTBR T+ Itpr3tf/J both 2.4465 0.3947 3.2226 1.6704
BUB/BnJ both 1.5161 0.402 2.3065 0.7258
C3H/HeJ both 9.5044 0.3814 10.2542 8.7546
C57BL/10J both 5.2363 0.3947 6.0124 4.4601
C57BL/6J both 6.7581 0.3814 7.5079 6.0083
C57BLKS/J both 3.6775 0.3814 4.4273 2.9277
C57BR/cdJ both 3.3525 0.3814 4.1023 2.6027
C57L/J both 7.1627 0.3947 7.9388 6.3866
CBA/J both 5.3613 0.3814 6.111 4.6115
DBA/2J both 1.5192 0.4243 2.3535 0.6849
FVB/NJ both 3.3269 0.3814 4.0767 2.5771
KK/HlJ both 4.0369 0.3814 4.7867 3.2871
LP/J both 4.344 0.3947 5.1201 3.5679
MOLF/EiJ both 0.2447 0.3844 1.0004 0.0
MRL/MpJ both 4.5412 0.3814 5.291 3.7915
NON/ShiLtJ both 3.5317 0.4119 4.3415 2.7218
NZO/HlLtJ both 9.7564 0.4077 10.558 8.9549
NZW/LacJ both 2.4812 0.3814 3.231 1.7315
P/J both 2.0375 0.3947 2.8136 1.2614
PL/J both 0.7305 0.4243 1.5648 0.0
PWD/PhJ both 1.1519 0.3814 1.9017 0.4021
RIIIS/J both 1.48 0.3814 2.2298 0.7302
SJL/J both 1.9783 0.3706 2.707 1.2497
SM/J both 4.2194 0.3814 4.9692 3.4696
SWR/J both 0.7279 0.4077 1.5294 0.0
WSB/EiJ both 1.8369 0.3814 2.5867 1.0871




  GWAS USING LINEAR MIXED MODELS