Project measure / variable:   Petkova1   CD4_all_M24

ID, description, units MPD:24232   CD4_all_M24   CD4 T cells, as percentage of total lymphocytes   [%]  at age 24mo  
Data set, strains Petkova1   inbred   12 strains     sex: both     age: 104wks
Procedure immune cell quantification
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Petkova1 - CD4 T cells, as percentage of total lymphocytes at age 24mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested11 strains11 strains
Mean of the strain means12.4   % 11.7   %
Median of the strain means12.7   % 11.4   %
SD of the strain means± 4.73 ± 5.95
Coefficient of variation (CV)0.381 0.508
Min–max range of strain means4.14   –   19.5   % 2.42   –   21.8   %
Mean sample size per strain7.0   mice 7.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 5.1629 5.1629 0.1555 0.694
strain 9 3671.4064 407.934 12.2884 < 0.0001
sex:strain 9 272.5538 30.2838 0.9123 0.5171
Residuals 121 4016.7929 33.1966


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 14.2 4.51   6 1.84 0.318 8.08, 21.5 0.38
129S1/SvImJ m 21.8 4.5   7 1.7 0.206 14.8, 27.1 1.7
BALB/cByJ f 13.7 9.11   7 3.44 0.666 0.71, 28.7 0.27
C3H/HeJ m 11.4 5.76   8 2.04 0.506 5.29, 23.0 -0.05
C57BL/10J f 4.14 3.91   8 1.38 0.943 1.24, 13.1 -1.75
C57BL/10J m 2.42 0.825   6 0.337 0.34 1.54, 3.53 -1.56
C57BL/6J f 7.9 4.43   8 1.57 0.561 3.67, 15.4 -0.95
C57BL/6J m 7.45 3.46   8 1.22 0.464 3.38, 12.8 -0.72
C57BLKS/J f 7.17 2.07   6 0.846 0.289 5.09, 10.2 -1.11
C57BLKS/J m 5.62 3.57   7 1.35 0.637 1.97, 11.4 -1.03
C57BR/cdJ f 11.5 6.83   7 2.58 0.592 2.75, 21.5 -0.19
C57BR/cdJ m 8.33 5.56   9 1.85 0.668 1.91, 15.6 -0.57
LP/J f 16.8 10.4   8 3.67 0.616 7.42, 36.7 0.93
LP/J m 17.3 6.86   6 2.8 0.397 8.45, 24.6 0.94
NON/ShiLtJ f 12.7 3.39   8 1.2 0.267 8.16, 17.5 0.06
NON/ShiLtJ m 11.5 5.1   7 1.93 0.444 4.09, 19.8 -0.04
NZW/LacJ f 19.5 7.54   6 3.08 0.388 6.74, 27.7 1.5
NZW/LacJ m 18.2 10.1   7 3.81 0.552 3.01, 31.5 1.09
PWD/PhJ f 11.0 4.66   7 1.76 0.425 6.63, 18.5 -0.3
PWD/PhJ m 8.94 2.22   7 0.838 0.248 5.16, 11.4 -0.47
WSB/EiJ f 17.9 8.14   6 3.32 0.455 5.14, 28.9 1.16
WSB/EiJ m 15.9 6.16   7 2.33 0.387 9.77, 26.4 0.7


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 14.1967 2.3522 18.8534 9.5399
129S1/SvImJ m 21.8286 2.1777 26.1399 17.5172
C57BL/10J f 4.145 2.0371 8.1779 0.1121
C57BL/10J m 2.425 2.3522 7.0818 0.0
C57BL/6J f 7.9013 2.0371 11.9341 3.8684
C57BL/6J m 7.4513 2.0371 11.4841 3.4184
C57BLKS/J f 7.165 2.3522 11.8218 2.5082
C57BLKS/J m 5.6157 2.1777 9.927 1.3044
C57BR/cdJ f 11.5371 2.1777 15.8485 7.2258
C57BR/cdJ m 8.3311 1.9206 12.1333 4.5289
LP/J f 16.845 2.0371 20.8779 12.8121
LP/J m 17.3 2.3522 21.9568 12.6432
NON/ShiLtJ f 12.6625 2.0371 16.6954 8.6296
NON/ShiLtJ m 11.4929 2.1777 15.8042 7.1815
NZW/LacJ f 19.4567 2.3522 24.1134 14.7999
NZW/LacJ m 18.23 2.1777 22.5413 13.9187
PWD/PhJ f 10.98 2.1777 15.2913 6.6687
PWD/PhJ m 8.94 2.1777 13.2513 4.6287
WSB/EiJ f 17.89 2.3522 22.5468 13.2332
WSB/EiJ m 15.9243 2.1777 20.2356 11.613


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 18.0126 1.6027 21.1857 14.8396
C57BL/10J both 3.285 1.5558 6.3652 0.2048
C57BL/6J both 7.6763 1.4404 10.5279 4.8246
C57BLKS/J both 6.3904 1.6027 9.5634 3.2173
C57BR/cdJ both 9.9341 1.4518 12.8083 7.0599
LP/J both 17.0725 1.5558 20.1527 13.9923
NON/ShiLtJ both 12.0777 1.491 15.0294 9.1259
NZW/LacJ both 18.8433 1.6027 22.0164 15.6703
PWD/PhJ both 9.96 1.5399 13.0086 6.9114
WSB/EiJ both 16.9071 1.6027 20.0802 13.7341




  GWAS USING LINEAR MIXED MODELS