Project measure / variable:   Petkova1   B_cells_M24

ID, description, units MPD:24228   B_cells_M24   B cells, as percentage of total lymphocytes   [%]  at age 24mo  
Data set, strains Petkova1   inbred   12 strains     sex: both     age: 104wks
Procedure immune cell quantification
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  STRAIN COMPARISON PLOT
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Petkova1 - B cells, as percentage of total lymphocytes at age 24mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested11 strains11 strains
Mean of the strain means43.2   % 38.8   %
Median of the strain means38.3   % 37.8   %
SD of the strain means± 13.1 ± 13.5
Coefficient of variation (CV)0.302 0.348
Min–max range of strain means25.6   –   63.7   % 12.9   –   60.2   %
Mean sample size per strain7.0   mice 7.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 421.2315 421.2315 1.6125 0.2066
strain 9 15376.22 1708.4689 6.5401 < 0.0001
sex:strain 9 2898.2485 322.0276 1.2327 0.2814
Residuals 121 31608.6032 261.2281


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 25.6 13.3   6 5.43 0.52 7.17, 37.5 -1.35
129S1/SvImJ m 37.8 9.34   7 3.53 0.247 25.9, 54.1 -0.07
BALB/cByJ f 35.4 15.7   7 5.94 0.444 4.04, 49.9 -0.6
C3H/HeJ m 12.9 5.66   8 2.0 0.438 5.01, 21.6 -1.92
C57BL/10J f 54.3 25.7   8 9.1 0.474 0.52, 82.0 0.85
C57BL/10J m 60.2 20.6   6 8.4 0.342 33.9, 79.9 1.58
C57BL/6J f 58.0 12.6   8 4.45 0.217 33.4, 73.2 1.13
C57BL/6J m 50.0 27.6   8 9.77 0.553 0.36, 84.4 0.83
C57BLKS/J f 63.7 6.33   6 2.59 0.0994 53.8, 71.3 1.57
C57BLKS/J m 46.0 22.8   7 8.62 0.496 11.2, 66.7 0.53
C57BR/cdJ f 34.4 20.0   7 7.54 0.581 11.8, 73.8 -0.68
C57BR/cdJ m 30.3 8.96   9 2.99 0.296 14.5, 43.1 -0.63
LP/J f 42.8 9.01   8 3.18 0.211 28.7, 54.7 -0.03
LP/J m 31.2 8.63   6 3.52 0.277 21.3, 43.3 -0.56
NON/ShiLtJ f 37.5 15.8   8 5.57 0.42 14.3, 60.6 -0.44
NON/ShiLtJ m 39.1 23.7   7 8.94 0.606 0.73, 65.1 0.02
NZW/LacJ f 27.9 9.25   6 3.78 0.332 12.1, 39.9 -1.17
NZW/LacJ m 37.7 16.5   7 6.24 0.437 23.2, 66.8 -0.08
PWD/PhJ f 57.6 11.6   7 4.4 0.202 33.1, 67.3 1.1
PWD/PhJ m 54.6 11.3   7 4.28 0.207 35.2, 68.8 1.17
WSB/EiJ f 38.3 12.2   6 4.97 0.317 22.1, 54.7 -0.38
WSB/EiJ m 27.1 6.05   7 2.29 0.223 16.5, 36.0 -0.87


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 25.5783 6.5983 38.6415 12.5152
129S1/SvImJ m 37.7571 6.1089 49.8513 25.663
C57BL/10J f 54.2775 5.7143 65.5905 42.9645
C57BL/10J m 60.2 6.5983 73.2631 47.1369
C57BL/6J f 58.0375 5.7143 69.3505 46.7245
C57BL/6J m 50.02 5.7143 61.333 38.707
C57BLKS/J f 63.7333 6.5983 76.7965 50.6702
C57BLKS/J m 45.9857 6.1089 58.0798 33.8916
C57BR/cdJ f 34.3714 6.1089 46.4655 22.2773
C57BR/cdJ m 30.3 5.3875 40.966 19.634
LP/J f 42.75 5.7143 54.063 31.437
LP/J m 31.2167 6.5983 44.2798 18.1535
NON/ShiLtJ f 37.5375 5.7143 48.8505 26.2245
NON/ShiLtJ m 39.0614 6.1089 51.1555 26.9673
NZW/LacJ f 27.9 6.5983 40.9631 14.8369
NZW/LacJ m 37.7286 6.1089 49.8227 25.6345
PWD/PhJ f 57.6143 6.1089 69.7084 45.5202
PWD/PhJ m 54.6 6.1089 66.6941 42.5059
WSB/EiJ f 38.3333 6.5983 51.3965 25.2702
WSB/EiJ m 27.1143 6.1089 39.2084 15.0202


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 31.6677 4.496 40.5688 22.7667
C57BL/10J both 57.2388 4.3644 65.8792 48.5983
C57BL/6J both 54.0287 4.0406 62.0283 46.0292
C57BLKS/J both 54.8595 4.496 63.7606 45.9585
C57BR/cdJ both 32.3357 4.0726 40.3985 24.273
LP/J both 36.9833 4.3644 45.6238 28.3429
NON/ShiLtJ both 38.2995 4.1825 46.5797 30.0192
NZW/LacJ both 32.8143 4.496 41.7153 23.9133
PWD/PhJ both 56.1071 4.3196 64.659 47.5553
WSB/EiJ both 32.7238 4.496 41.6248 23.8228




  GWAS USING LINEAR MIXED MODELS