Project measure / variable:   Petkova1   B_cells_M12

ID, description, units MPD:24226   B_cells_M12   B cells, as percentage of total lymphocytes   [%]  at age 12mo  
Data set, strains Petkova1   inbred   31 strains     sex: both     age: 52wks
Procedure immune cell quantification
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested30 strains30 strains
Mean of the strain means37.9   % 42.6   %
Median of the strain means31.9   % 41.4   %
SD of the strain means± 17.7 ± 18.0
Coefficient of variation (CV)0.466 0.422
Min–max range of strain means9.89   –   74.0   % 8.91   –   77.2   %
Mean sample size per strain7.6   mice 7.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 3969.5013 3969.5013 79.2386 < 0.0001
strain 28 118367.428 4227.4081 84.3869 < 0.0001
sex:strain 28 15242.2877 544.3674 10.8666 < 0.0001
Residuals 388 19437.0831 50.0956


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 60 (60)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S1/SvImJ f 26.8 2.46   8 0.869 0.0917 22.8, 29.8 -0.63
129S1/SvImJ m 65.5 5.36   8 1.89 0.0818 59.2, 75.4 1.27
A/J f 27.9 9.96   8 3.52 0.357 15.3, 42.0 -0.57
A/J m 36.9 9.35   8 3.31 0.254 23.0, 51.4 -0.32
AKR/J m 39.1 20.5   5 9.15 0.523 3.02, 52.8 -0.19
BALB/cByJ f 32.2 9.97   8 3.53 0.309 16.0, 44.2 -0.33
BALB/cByJ m 50.5 10.1   8 3.57 0.2 37.8, 62.5 0.44
BTBR T+ Itpr3tf/J f 26.2 3.5   8 1.24 0.134 22.2, 32.8 -0.66
BTBR T+ Itpr3tf/J m 26.3 3.89   7 1.47 0.148 21.7, 32.1 -0.9
BUB/BnJ f 48.5 7.38   6 3.01 0.152 39.3, 59.4 0.6
BUB/BnJ m 62.4 5.62   9 1.87 0.0901 57.3, 70.1 1.1
C3H/HeJ f 31.4 5.24   8 1.85 0.167 26.8, 42.5 -0.37
C3H/HeJ m 44.8 6.53   8 2.31 0.146 37.7, 58.1 0.12
C57BL/10J f 70.7 6.63   8 2.34 0.0937 62.6, 78.7 1.85
C57BL/10J m 77.1 6.8   7 2.57 0.0882 65.1, 84.2 1.92
C57BL/6J f 74.0 8.51   8 3.01 0.115 60.4, 84.1 2.04
C57BL/6J m 77.2 5.0   8 1.77 0.0647 70.9, 86.0 1.92
C57BLKS/J f 65.2 4.09   8 1.45 0.0627 56.5, 69.0 1.54
C57BLKS/J m 57.3 3.94   8 1.39 0.0688 50.1, 61.6 0.82
C57BR/cdJ f 47.6 5.93   8 2.1 0.125 40.2, 58.5 0.55
C57BR/cdJ m 45.0 6.7   8 2.37 0.149 35.4, 55.7 0.13
C57L/J f 57.7 4.09   7 1.55 0.0708 52.1, 62.2 1.12
C57L/J m 66.6 5.11   8 1.81 0.0766 56.8, 72.5 1.34
CAST/EiJ f 69.6 1.9   3 1.1 0.0273 67.7, 71.5 1.79
CBA/J f 25.5 5.94   8 2.1 0.233 19.0, 35.8 -0.7
CBA/J m 29.8 7.09   8 2.51 0.238 19.5, 41.4 -0.71
DBA/2J f 55.2 7.84   6 3.2 0.142 43.8, 66.6 0.98
DBA/2J m 45.1 7.94   7 3.0 0.176 36.8, 54.3 0.14
FVB/NJ f 20.3 3.37   8 1.19 0.166 13.6, 24.8 -1.0
FVB/NJ m 20.8 3.79   8 1.34 0.182 15.4, 27.6 -1.21
KK/HlJ f 45.7 5.26   8 1.86 0.115 38.4, 55.6 0.44
KK/HlJ m 33.5 6.31   8 2.23 0.189 22.6, 43.2 -0.5
LP/J f 31.6 9.76   7 3.69 0.309 21.5, 51.2 -0.36
LP/J m 15.6 5.78   8 2.04 0.37 8.47, 26.8 -1.5
MOLF/EiJ f 47.8 7.73   7 2.92 0.162 35.0, 59.7 0.56
MOLF/EiJ m 39.1 9.2   9 3.07 0.235 29.0, 51.7 -0.19
MRL/MpJ f 19.4 7.73   8 2.73 0.398 10.4, 36.3 -1.05
MRL/MpJ m 8.91 6.67   8 2.36 0.748 2.04, 22.1 -1.87
NON/ShiLtJ f 44.1 17.3   8 6.13 0.394 14.1, 66.4 0.35
NON/ShiLtJ m 58.2 7.97   6 3.25 0.137 50.5, 73.0 0.87
NZO/HlLtJ f 26.3 4.72   6 1.93 0.18 21.8, 34.2 -0.66
NZO/HlLtJ m 46.1 8.09   7 3.06 0.176 32.5, 55.1 0.2
NZW/LacJ f 26.3 2.82   8 0.998 0.107 22.5, 31.5 -0.66
NZW/LacJ m 33.1 6.43   8 2.27 0.194 24.7, 40.6 -0.53
P/J f 50.8 14.8   8 5.24 0.292 31.4, 67.3 0.73
P/J m 66.1 5.07   7 1.92 0.0768 59.5, 72.1 1.31
PL/J f 9.89 4.0   7 1.51 0.404 6.84, 18.3 -1.59
PL/J m 19.1 3.3   6 1.35 0.173 14.9, 24.1 -1.31
PWD/PhJ f 27.9 3.27   8 1.16 0.117 20.5, 30.8 -0.57
PWD/PhJ m 43.7 3.94   8 1.39 0.0903 38.4, 49.1 0.06
RIIIS/J f 16.4 3.0   8 1.06 0.184 12.1, 20.2 -1.22
RIIIS/J m 27.7 2.64   8 0.933 0.0952 22.6, 30.6 -0.83
SJL/J f 21.3 11.1   8 3.92 0.521 7.64, 43.5 -0.94
SJL/J m 37.0 8.96   9 2.99 0.242 25.0, 50.5 -0.31
SM/J f 37.5 5.89   8 2.08 0.157 32.6, 48.5 -0.03
SM/J m 49.1 7.34   8 2.59 0.149 41.5, 62.4 0.36
SWR/J f 39.2 6.77   7 2.56 0.173 29.3, 45.6 0.07
SWR/J m 35.5 8.42   7 3.18 0.237 21.9, 46.3 -0.39
WSB/EiJ f 15.5 3.32   8 1.17 0.213 11.6, 21.0 -1.27
WSB/EiJ m 20.2 4.27   8 1.51 0.211 14.0, 27.0 -1.24


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 26.7875 2.5024 31.7074 21.8676
129S1/SvImJ m 65.5375 2.5024 70.4574 60.6176
A/J f 27.875 2.5024 32.7949 22.9551
A/J m 36.8625 2.5024 41.7824 31.9426
BALB/cByJ f 32.25 2.5024 37.1699 27.3301
BALB/cByJ m 50.5375 2.5024 55.4574 45.6176
BTBR T+ Itpr3tf/J f 26.1875 2.5024 31.1074 21.2676
BTBR T+ Itpr3tf/J m 26.2714 2.6752 31.5311 21.0118
BUB/BnJ f 48.4833 2.8895 54.1644 42.8023
BUB/BnJ m 62.4 2.3593 67.0386 57.7614
C3H/HeJ f 31.375 2.5024 36.2949 26.4551
C3H/HeJ m 44.825 2.5024 49.7449 39.9051
C57BL/10J f 70.7375 2.5024 75.6574 65.8176
C57BL/10J m 77.1143 2.6752 82.3739 71.8547
C57BL/6J f 74.05 2.5024 78.9699 69.1301
C57BL/6J m 77.225 2.5024 82.1449 72.3051
C57BLKS/J f 65.2375 2.5024 70.1574 60.3176
C57BLKS/J m 57.25 2.5024 62.1699 52.3301
C57BR/cdJ f 47.6 2.5024 52.5199 42.6801
C57BR/cdJ m 45.025 2.5024 49.9449 40.1051
C57L/J f 57.7429 2.6752 63.0025 52.4832
C57L/J m 66.65 2.5024 71.5699 61.7301
CBA/J f 25.4875 2.5024 30.4074 20.5676
CBA/J m 29.7625 2.5024 34.6824 24.8426
DBA/2J f 55.1833 2.8895 60.8644 49.5023
DBA/2J m 45.0857 2.6752 50.3453 39.8261
FVB/NJ f 20.3 2.5024 25.2199 15.3801
FVB/NJ m 20.7875 2.5024 25.7074 15.8676
KK/HlJ f 45.675 2.5024 50.5949 40.7551
KK/HlJ m 33.4625 2.5024 38.3824 28.5426
LP/J f 31.6143 2.6752 36.8739 26.3547
LP/J m 15.6338 2.5024 20.5537 10.7138
MOLF/EiJ f 47.7714 2.6752 53.0311 42.5118
MOLF/EiJ m 39.0778 2.3593 43.7163 34.4392
MRL/MpJ f 19.4 2.5024 24.3199 14.4801
MRL/MpJ m 8.915 2.5024 13.8349 3.9951
NON/ShiLtJ f 44.0625 2.5024 48.9824 39.1426
NON/ShiLtJ m 58.25 2.8895 63.9311 52.5689
NZO/HlLtJ f 26.2833 2.8895 31.9644 20.6023
NZO/HlLtJ m 46.0714 2.6752 51.3311 40.8118
NZW/LacJ f 26.2875 2.5024 31.2074 21.3676
NZW/LacJ m 33.1125 2.5024 38.0324 28.1926
P/J f 50.7875 2.5024 55.7074 45.8676
P/J m 66.0571 2.6752 71.3168 60.7975
PL/J f 9.8886 2.6752 15.1482 4.6289
PL/J m 19.0667 2.8895 24.7477 13.3856
PWD/PhJ f 27.8875 2.5024 32.8074 22.9676
PWD/PhJ m 43.675 2.5024 48.5949 38.7551
RIIIS/J f 16.35 2.5024 21.2699 11.4301
RIIIS/J m 27.7125 2.5024 32.6324 22.7926
SJL/J f 21.28 2.5024 26.1999 16.3601
SJL/J m 37.0 2.3593 41.6386 32.3614
SM/J f 37.4625 2.5024 42.3824 32.5426
SM/J m 49.075 2.5024 53.9949 44.1551
SWR/J f 39.1857 2.6752 44.4453 33.9261
SWR/J m 35.5429 2.6752 40.8025 30.2832
WSB/EiJ f 15.5375 2.5024 20.4574 10.6176
WSB/EiJ m 20.2125 2.5024 25.1324 15.2926


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 46.1625 1.7695 49.6414 42.6836
A/J both 32.3687 1.7695 35.8477 28.8898
BALB/cByJ both 41.3938 1.7695 44.8727 37.9148
BTBR T+ Itpr3tf/J both 26.2295 1.8316 29.8305 22.6284
BUB/BnJ both 55.4417 1.8652 59.1088 51.7746
C3H/HeJ both 38.1 1.7695 41.5789 34.6211
C57BL/10J both 73.9259 1.8316 77.5269 70.3249
C57BL/6J both 75.6375 1.7695 79.1164 72.1586
C57BLKS/J both 61.2437 1.7695 64.7227 57.7648
C57BR/cdJ both 46.3125 1.7695 49.7914 42.8336
C57L/J both 62.1964 1.8316 65.7975 58.5954
CBA/J both 27.625 1.7695 31.1039 24.1461
DBA/2J both 50.1345 1.9689 54.0055 46.2635
FVB/NJ both 20.5437 1.7695 24.0227 17.0648
KK/HlJ both 39.5688 1.7695 43.0477 36.0898
LP/J both 23.624 1.8316 27.225 20.023
MOLF/EiJ both 43.4246 1.7834 46.931 39.9182
MRL/MpJ both 14.1575 1.7695 17.6364 10.6786
NON/ShiLtJ both 51.1562 1.9112 54.9139 47.3986
NZO/HlLtJ both 36.1774 1.9689 40.0484 32.3064
NZW/LacJ both 29.7 1.7695 33.1789 26.2211
P/J both 58.4223 1.8316 62.0233 54.8213
PL/J both 14.4776 1.9689 18.3486 10.6066
PWD/PhJ both 35.7812 1.7695 39.2602 32.3023
RIIIS/J both 22.0312 1.7695 25.5102 18.5523
SJL/J both 29.14 1.7196 32.5209 25.7591
SM/J both 43.2687 1.7695 46.7477 39.7898
SWR/J both 37.3643 1.8916 41.0834 33.6452
WSB/EiJ both 17.875 1.7695 21.3539 14.3961




  GWAS USING LINEAR MIXED MODELS

Loading data... this may take some time.