Project measure / variable:   Petkova1   MONO_M18

ID, description, units MPD:24223   MONO_M18   monocyte differential (MONO; percentage of total WBC)   [%]  at age 18mo  
Data set, strains Petkova1   inbred   30 strains     sex: both     age: 78wks
Procedure immune cell quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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Petkova1 - monocyte differential (MONO; percentage of total WBC) at age 18mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested29 strains25 strains
Mean of the strain means10.9   % 9.85   %
Median of the strain means10.2   % 8.13   %
SD of the strain means± 5.62 ± 4.99
Coefficient of variation (CV)0.518 0.507
Min–max range of strain means3.12   –   29.6   % 3.20   –   22.7   %
Mean sample size per strain7.3   mice 6.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 65.201 65.201 3.9175 0.0488
strain 22 8383.569 381.0713 22.8959 < 0.0001
sex:strain 22 1365.1644 62.0529 3.7283 < 0.0001
Residuals 278 4626.9413 16.6437


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 6.59 2.09   7 0.79 0.317 3.8, 10.4 -0.76
129S1/SvImJ m 7.33 1.38   8 0.488 0.189 5.83, 9.3 -0.5
A/J f 7.3 2.91   8 1.03 0.398 1.47, 11.0 -0.63
BALB/cByJ f 3.52 1.52   8 0.537 0.432 0.23, 5.34 -1.31
BALB/cByJ m 7.13 3.09   6 1.26 0.434 3.32, 11.7 -0.54
BTBR T+ Itpr3tf/J f 12.1 5.65   8 2.0 0.466 7.75, 25.2 0.22
BTBR T+ Itpr3tf/J m 12.7 4.32   5 1.93 0.34 8.23, 19.1 0.57
BUB/BnJ f 6.83 3.03   8 1.07 0.443 3.59, 11.9 -0.72
BUB/BnJ m 4.22 1.47   6 0.598 0.347 3.09, 6.83 -1.13
C3H/HeJ f 13.0 4.86   8 1.72 0.373 5.22, 20.7 0.38
C3H/HeJ m 7.1 1.39   8 0.491 0.196 5.2, 9.41 -0.55
C57BL/10J f 16.3 4.1   7 1.55 0.251 10.8, 23.8 0.97
C57BL/10J m 14.8 0.0   1   0.0 0.0 14.8, 14.8 0.99
C57BL/6J f 10.2 3.92   8 1.39 0.382 4.72, 15.8 -0.12
C57BL/6J m 7.05 1.86   7 0.704 0.264 4.77, 10.7 -0.56
C57BLKS/J f 10.4 7.45   7 2.82 0.719 5.99, 27.1 -0.08
C57BR/cdJ f 12.1 2.87   8 1.01 0.237 6.58, 16.0 0.22
C57BR/cdJ m 11.1 2.69   8 0.95 0.242 7.72, 16.1 0.25
C57L/J f 11.6 3.43   8 1.21 0.297 7.31, 16.7 0.13
C57L/J m 8.32 0.712   6 0.291 0.0855 7.16, 9.03 -0.31
CBA/J f 3.12 1.41   8 0.498 0.451 1.59, 5.96 -1.38
CBA/J m 5.26 0.818   6 0.334 0.155 4.38, 6.62 -0.92
DBA/2J f 6.15 1.88   7 0.711 0.306 3.17, 8.24 -0.84
DBA/2J m 6.04 2.16   8 0.765 0.358 3.52, 9.29 -0.76
FVB/NJ f 5.19 0.658   8 0.233 0.127 4.25, 6.33 -1.01
KK/HlJ f 9.95 1.72   7 0.649 0.173 7.83, 12.3 -0.16
KK/HlJ m 8.77 0.951   7 0.36 0.109 7.48, 10.4 -0.22
LP/J f 21.8 6.3   7 2.38 0.289 12.4, 28.7 1.95
LP/J m 22.7 10.4   8 3.69 0.46 13.3, 46.7 2.57
MOLF/EiJ f 12.1 1.56   9 0.521 0.129 10.0, 14.4 0.22
MOLF/EiJ m 14.8 2.05   7 0.776 0.138 11.5, 17.2 0.99
MRL/MpJ f 18.2 10.7   6 4.38 0.589 1.33, 29.0 1.31
MRL/MpJ m 20.4 4.24   8 1.5 0.208 11.3, 24.7 2.11
NOD.B10Sn-H2b/J f 29.6 10.7   7 4.05 0.362 12.0, 41.2 3.33
NOD.B10Sn-H2b/J m 14.1 6.28   6 2.56 0.447 7.46, 23.1 0.85
NON/ShiLtJ f 17.0 3.26   7 1.23 0.192 11.7, 22.8 1.09
NON/ShiLtJ m 10.9 2.73   7 1.03 0.251 7.49, 15.9 0.21
NZO/HlLtJ f 11.8 7.0   3 4.04 0.592 7.57, 19.9 0.17
NZW/LacJ f 9.07 4.64   8 1.64 0.512 1.09, 14.4 -0.32
NZW/LacJ m 13.2 4.98   7 1.88 0.378 8.62, 22.7 0.67
P/J f 11.7 2.37   5 1.06 0.202 8.83, 14.9 0.15
P/J m 6.58 2.68   4 1.34 0.408 4.29, 10.1 -0.65
PL/J f 12.0 4.13   4 2.06 0.342 8.2, 16.1 0.2
PL/J m 14.8 4.04   5 1.81 0.273 10.1, 19.8 0.99
PWD/PhJ f 6.74 1.6   8 0.566 0.237 4.85, 9.7 -0.73
PWD/PhJ m 5.57 1.13   8 0.4 0.203 4.56, 7.37 -0.86
RIIIS/J m 4.72 0.979   8 0.346 0.207 2.91, 6.3 -1.03
SJL/J f 7.4 4.3   8 1.52 0.581 3.19, 15.9 -0.62
SJL/J m 3.2 1.5   7 0.569 0.47 1.56, 5.03 -1.33
SM/J f 8.82 3.94   7 1.49 0.447 4.91, 16.0 -0.36
SWR/J f 7.64 2.77   7 1.05 0.363 4.89, 11.6 -0.57
SWR/J m 8.13 4.08   6 1.67 0.502 4.4, 13.4 -0.34
WSB/EiJ f 6.75 2.33   8 0.825 0.345 2.3, 8.65 -0.73
WSB/EiJ m 7.35 1.63   7 0.618 0.223 5.44, 9.29 -0.5


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 6.5929 1.542 9.6283 3.5574
129S1/SvImJ m 7.325 1.4424 10.1644 4.4856
BALB/cByJ f 3.5163 1.4424 6.3556 0.6769
BALB/cByJ m 7.1267 1.6655 10.4053 3.848
BTBR T+ Itpr3tf/J f 12.125 1.4424 14.9644 9.2856
BTBR T+ Itpr3tf/J m 12.738 1.8245 16.3296 9.1464
BUB/BnJ f 6.8288 1.4424 9.6681 3.9894
BUB/BnJ m 4.2183 1.6655 7.497 0.9397
C3H/HeJ f 13.015 1.4424 15.8544 10.1756
C3H/HeJ m 7.0963 1.4424 9.9356 4.2569
C57BL/6J f 10.25 1.4424 13.0894 7.4106
C57BL/6J m 7.0486 1.542 10.084 4.0132
C57BR/cdJ f 12.0975 1.4424 14.9369 9.2581
C57BR/cdJ m 11.0975 1.4424 13.9369 8.2581
C57L/J f 11.55 1.4424 14.3894 8.7106
C57L/J m 8.3233 1.6655 11.602 5.0447
CBA/J f 3.12 1.4424 5.9594 0.2806
CBA/J m 5.2633 1.6655 8.542 1.9847
DBA/2J f 6.1529 1.542 9.1883 3.1174
DBA/2J m 6.04 1.4424 8.8794 3.2006
KK/HlJ f 9.9514 1.542 12.9868 6.916
KK/HlJ m 8.7657 1.542 11.8011 5.7303
LP/J f 21.8143 1.542 24.8497 18.7789
LP/J m 22.7 1.4424 25.5394 19.8606
MOLF/EiJ f 12.1111 1.3599 14.7881 9.4341
MOLF/EiJ m 14.8286 1.542 17.864 11.7932
MRL/MpJ f 18.2383 1.6655 21.517 14.9597
MRL/MpJ m 20.3625 1.4424 23.2019 17.5231
NOD.B10Sn-H2b/J f 29.6286 1.542 32.664 26.5932
NOD.B10Sn-H2b/J m 14.06 1.6655 17.3386 10.7814
NON/ShiLtJ f 16.9571 1.542 19.9926 13.9217
NON/ShiLtJ m 10.8614 1.542 13.8968 7.826
NZW/LacJ f 9.0675 1.4424 11.9069 6.2281
NZW/LacJ m 13.15 1.542 16.1854 10.1146
P/J f 11.726 1.8245 15.3176 8.1344
P/J m 6.585 2.0398 10.6005 2.5695
PL/J f 12.05 2.0398 16.0655 8.0345
PL/J m 14.82 1.8245 18.4116 11.2284
PWD/PhJ f 6.7425 1.4424 9.5819 3.9031
PWD/PhJ m 5.5687 1.4424 8.4081 2.7294
SJL/J f 7.4 1.4424 10.2394 4.5606
SJL/J m 3.2043 1.542 6.2397 0.1689
SWR/J f 7.6357 1.542 10.6711 4.6003
SWR/J m 8.1333 1.6655 11.412 4.8547
WSB/EiJ f 6.755 1.4424 9.5944 3.9156
WSB/EiJ m 7.3457 1.542 10.3811 4.3103


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 6.9589 1.0557 9.0371 4.8807
BALB/cByJ both 5.3215 1.1016 7.4901 3.1529
BTBR T+ Itpr3tf/J both 12.4315 1.1629 14.7207 10.1423
BUB/BnJ both 5.5235 1.1016 7.6921 3.3549
C3H/HeJ both 10.0556 1.0199 12.0634 8.0479
C57BL/6J both 8.6493 1.0557 10.7275 6.5711
C57BR/cdJ both 11.5975 1.0199 13.6052 9.5898
C57L/J both 9.9367 1.1016 12.1053 7.7681
CBA/J both 4.1917 1.1016 6.3603 2.0231
DBA/2J both 6.0964 1.0557 8.1746 4.0182
KK/HlJ both 9.3586 1.0903 11.5049 7.2122
LP/J both 22.2571 1.0557 24.3354 20.1789
MOLF/EiJ both 13.4698 1.028 15.4935 11.4462
MRL/MpJ both 19.3004 1.1016 21.469 17.1318
NOD.B10Sn-H2b/J both 21.8443 1.1349 24.0783 19.6103
NON/ShiLtJ both 13.9093 1.0903 16.0557 11.7629
NZW/LacJ both 11.1088 1.0557 13.187 9.0305
P/J both 9.1555 1.3684 11.8492 6.4618
PL/J both 13.435 1.3684 16.1287 10.7413
PWD/PhJ both 6.1556 1.0199 8.1634 4.1479
SJL/J both 5.3021 1.0557 7.3804 3.2239
SWR/J both 7.8845 1.1349 10.1185 5.6505
WSB/EiJ both 7.0504 1.0557 9.1286 4.9721




  GWAS USING LINEAR MIXED MODELS