Project measure / variable:   Petkova1   NEUT_M18

ID, description, units MPD:24213   NEUT_M18   neutrophil differential (NEUT; percentage of total WBC)   [%]  at age 18mo  
Data set, strains Petkova1   inbred   30 strains     sex: both     age: 78wks
Procedure immune cell quantification
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  STRAIN COMPARISON PLOT
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Petkova1 - neutrophil differential (NEUT; percentage of total WBC) at age 18mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested29 strains25 strains
Mean of the strain means23.4   % 25.8   %
Median of the strain means20.9   % 23.8   %
SD of the strain means± 12.1 ± 10.9
Coefficient of variation (CV)0.516 0.420
Min–max range of strain means8.40   –   56.1   % 10.3   –   47.3   %
Mean sample size per strain7.3   mice 6.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 918.8805 918.8805 7.5444 0.0064
strain 22 35609.3241 1618.6056 13.2894 < 0.0001
sex:strain 22 6370.1502 289.5523 2.3773 0.0007
Residuals 278 33859.518 121.7968


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 16.6 8.55   7 3.23 0.516 10.9, 35.0 -0.56
129S1/SvImJ m 33.9 4.73   8 1.67 0.14 27.7, 40.8 0.74
A/J f 29.9 13.3   8 4.69 0.444 13.7, 53.9 0.54
BALB/cByJ f 15.4 8.92   8 3.15 0.58 4.56, 26.2 -0.66
BALB/cByJ m 23.9 18.8   6 7.67 0.786 9.51, 61.1 -0.18
BTBR T+ Itpr3tf/J f 25.2 7.94   8 2.81 0.315 15.4, 40.5 0.15
BTBR T+ Itpr3tf/J m 18.0 6.43   5 2.87 0.356 11.4, 27.9 -0.72
BUB/BnJ f 13.3 6.97   8 2.46 0.524 4.28, 25.4 -0.83
BUB/BnJ m 17.4 9.13   6 3.73 0.524 5.73, 32.0 -0.78
C3H/HeJ f 30.7 11.4   8 4.02 0.37 11.0, 45.3 0.61
C3H/HeJ m 37.5 7.13   8 2.52 0.19 30.0, 50.8 1.07
C57BL/10J f 8.4 2.17   7 0.821 0.259 6.4, 11.1 -1.24
C57BL/10J m 10.3 0.0   1   0.0 0.0 10.3, 10.3 -1.43
C57BL/6J f 10.2 9.83   8 3.48 0.96 2.1, 33.2 -1.09
C57BL/6J m 10.3 14.8   7 5.6 1.44 3.15, 43.6 -1.43
C57BLKS/J f 8.84 7.85   7 2.97 0.888 4.21, 26.3 -1.2
C57BR/cdJ f 14.5 6.23   8 2.2 0.429 2.99, 24.2 -0.74
C57BR/cdJ m 13.2 7.7   8 2.72 0.582 5.02, 29.7 -1.16
C57L/J f 20.9 10.5   8 3.7 0.5 5.92, 37.0 -0.2
C57L/J m 15.5 9.78   6 3.99 0.629 8.52, 34.6 -0.95
CBA/J f 11.0 5.91   8 2.09 0.537 4.08, 22.3 -1.03
CBA/J m 16.7 5.84   6 2.39 0.349 10.1, 26.9 -0.84
DBA/2J f 21.4 8.21   7 3.1 0.384 13.1, 36.5 -0.16
DBA/2J m 37.1 14.3   8 5.05 0.385 17.7, 56.4 1.04
FVB/NJ f 17.4 2.89   8 1.02 0.166 14.8, 22.2 -0.49
KK/HlJ f 54.1 12.8   7 4.83 0.236 31.7, 68.9 2.55
KK/HlJ m 45.2 6.52   7 2.46 0.144 34.2, 53.3 1.78
LP/J f 19.5 5.73   7 2.17 0.294 14.4, 29.6 -0.32
LP/J m 17.2 7.35   8 2.6 0.427 8.76, 30.7 -0.8
MOLF/EiJ f 15.2 3.88   9 1.29 0.255 7.7, 20.7 -0.68
MOLF/EiJ m 16.9 7.16   7 2.71 0.423 9.67, 27.0 -0.82
MRL/MpJ f 56.1 16.7   6 6.81 0.297 35.6, 81.6 2.71
MRL/MpJ m 38.3 7.39   8 2.61 0.193 26.1, 50.7 1.15
NOD.B10Sn-H2b/J f 30.8 9.83   7 3.71 0.319 19.5, 48.1 0.62
NOD.B10Sn-H2b/J m 35.7 7.93   6 3.24 0.222 22.7, 42.8 0.91
NON/ShiLtJ f 36.9 4.34   7 1.64 0.118 29.7, 42.8 1.12
NON/ShiLtJ m 47.3 10.8   7 4.1 0.229 33.4, 63.3 1.98
NZO/HlLtJ f 25.7 4.83   3 2.79 0.188 21.6, 31.0 0.19
NZW/LacJ f 15.8 12.5   8 4.41 0.791 2.42, 35.9 -0.63
NZW/LacJ m 23.8 8.6   7 3.25 0.361 14.7, 35.4 -0.19
P/J f 27.2 16.3   5 7.31 0.601 11.4, 45.7 0.32
P/J m 26.5 20.1   4 10.1 0.76 10.9, 56.1 0.06
PL/J f 39.3 8.41   4 4.21 0.214 31.6, 50.9 1.32
PL/J m 36.1 9.81   5 4.39 0.272 25.8, 50.7 0.95
PWD/PhJ f 32.5 19.9   8 7.02 0.611 22.1, 81.2 0.76
PWD/PhJ m 20.9 5.3   8 1.87 0.253 15.9, 30.5 -0.46
RIIIS/J m 23.7 8.3   8 2.93 0.35 13.3, 41.8 -0.2
SJL/J f 19.1 11.3   8 3.98 0.591 6.51, 39.6 -0.35
SJL/J m 36.2 24.3   7 9.19 0.671 9.98, 69.6 0.95
SM/J f 24.0 6.55   7 2.48 0.273 13.1, 31.9 0.05
SWR/J f 24.6 21.8   7 8.25 0.887 5.83, 61.6 0.1
SWR/J m 25.0 13.9   6 5.69 0.557 7.32, 41.1 -0.08
WSB/EiJ f 13.1 8.28   8 2.93 0.631 3.5, 28.6 -0.85
WSB/EiJ m 19.4 7.09   7 2.68 0.365 11.3, 32.3 -0.59


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 16.5714 4.1713 24.7827 8.3601
129S1/SvImJ m 33.85 3.9019 41.531 26.169
BALB/cByJ f 15.3875 3.9019 23.0685 7.7065
BALB/cByJ m 23.9017 4.5055 32.7709 15.0324
BTBR T+ Itpr3tf/J f 25.2 3.9019 32.881 17.519
BTBR T+ Itpr3tf/J m 18.04 4.9355 27.7557 8.3243
BUB/BnJ f 13.29 3.9019 20.971 5.609
BUB/BnJ m 17.4217 4.5055 26.2909 8.5524
C3H/HeJ f 30.7125 3.9019 38.3935 23.0315
C3H/HeJ m 37.525 3.9019 45.206 29.844
C57BL/6J f 10.2425 3.9019 17.9235 2.5615
C57BL/6J m 10.2786 4.1713 18.4899 2.0673
C57BR/cdJ f 14.515 3.9019 22.196 6.834
C57BR/cdJ m 13.2175 3.9019 20.8985 5.5365
C57L/J f 20.915 3.9019 28.596 13.234
C57L/J m 15.5367 4.5055 24.4059 6.6674
CBA/J f 11.0062 3.9019 18.6872 3.3253
CBA/J m 16.7333 4.5055 25.6026 7.8641
DBA/2J f 21.3571 4.1713 29.5684 13.1458
DBA/2J m 37.1 3.9019 44.781 29.419
KK/HlJ f 54.0857 4.1713 62.297 45.8744
KK/HlJ m 45.1571 4.1713 53.3684 36.9458
LP/J f 19.5143 4.1713 27.7256 11.303
LP/J m 17.22 3.9019 24.901 9.539
MOLF/EiJ f 15.2111 3.6787 22.4528 7.9694
MOLF/EiJ m 16.91 4.1713 25.1213 8.6987
MRL/MpJ f 56.1333 4.5055 65.0026 47.2641
MRL/MpJ m 38.3 3.9019 45.981 30.619
NOD.B10Sn-H2b/J f 30.8429 4.1713 39.0542 22.6316
NOD.B10Sn-H2b/J m 35.6833 4.5055 44.5526 26.8141
NON/ShiLtJ f 36.8857 4.1713 45.097 28.6744
NON/ShiLtJ m 47.3429 4.1713 55.5542 39.1316
NZW/LacJ f 15.7525 3.9019 23.4335 8.0715
NZW/LacJ m 23.8143 4.1713 32.0256 15.603
P/J f 27.22 4.9355 36.9357 17.5043
P/J m 26.5 5.5181 37.3625 15.6375
PL/J f 39.275 5.5181 50.1375 28.4125
PL/J m 36.06 4.9355 45.7757 26.3443
PWD/PhJ f 32.5125 3.9019 40.1935 24.8315
PWD/PhJ m 20.9375 3.9019 28.6185 13.2565
SJL/J f 19.0575 3.9019 26.7385 11.3765
SJL/J m 36.24 4.1713 44.4513 28.0287
SWR/J f 24.6157 4.1713 32.827 16.4044
SWR/J m 25.0367 4.5055 33.9059 16.1674
WSB/EiJ f 13.1362 3.9019 20.8172 5.4553
WSB/EiJ m 19.4143 4.1713 27.6256 11.203


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 25.2107 2.8559 30.8326 19.5888
BALB/cByJ both 19.6446 2.9801 25.511 13.7781
BTBR T+ Itpr3tf/J both 21.62 3.1458 27.8126 15.4274
BUB/BnJ both 15.3558 2.9801 21.2223 9.4894
C3H/HeJ both 34.1187 2.759 39.55 28.6875
C57BL/6J both 10.2605 2.8559 15.8824 4.6386
C57BR/cdJ both 13.8662 2.759 19.2975 8.435
C57L/J both 18.2258 2.9801 24.0923 12.3594
CBA/J both 13.8698 2.9801 19.7362 8.0034
DBA/2J both 29.2286 2.8559 34.8505 23.6067
KK/HlJ both 49.6214 2.9495 55.4277 43.8152
LP/J both 18.3671 2.8559 23.989 12.7453
MOLF/EiJ both 16.0606 2.7809 21.5348 10.5864
MRL/MpJ both 47.2167 2.9801 53.0831 41.3502
NOD.B10Sn-H2b/J both 33.2631 3.07 39.3064 27.2197
NON/ShiLtJ both 42.1143 2.9495 47.9206 36.308
NZW/LacJ both 19.7834 2.8559 25.4053 14.1615
P/J both 26.86 3.7016 34.1468 19.5732
PL/J both 37.6675 3.7016 44.9543 30.3807
PWD/PhJ both 26.725 2.759 32.1563 21.2937
SJL/J both 27.6487 2.8559 33.2706 22.0269
SWR/J both 24.8262 3.07 30.8695 18.7828
WSB/EiJ both 16.2753 2.8559 21.8972 10.6534




  GWAS USING LINEAR MIXED MODELS