Project measure / variable:   Petkova1   LYM_M12

ID, description, units MPD:24207   LYM_M12   lymphocyte differential (LYM; percentage of total WBC)   [%]  at age 12mo  
Data set, strains Petkova1   inbred   31 strains     sex: both     age: 52wks
Procedure immune cell quantification
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  STRAIN COMPARISON PLOT
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Petkova1 - lymphocyte differential (LYM; percentage of total WBC) at age 12mo

RIIIS/JCAST/EiJBTBR T<+> Itpr3<tf>/JBUB/BnJSM/JC57BLKS/JP/JA/JNZW/LacJC57BR/cdJC57L/JFVB/NJLP/JSWR/JSJL/JC57BL/10JBALB/cByJPWD/PhJNZO/HlLtJAKR/JC57BL/6J129S1/SvImJMOLF/EiJCBA/JDBA/2JWSB/EiJPL/JNON/ShiLtJKK/HlJMRL/MpJC3H/HeJ % 102030405060708090femalemale


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested30 strains30 strains
Mean of the strain means62.1   % 58.9   %
Median of the strain means65.3   % 60.3   %
SD of the strain means± 14.5 ± 11.5
Coefficient of variation (CV)0.234 0.196
Min–max range of strain means20.4   –   87.6   % 37.1   –   82.0   %
Mean sample size per strain7.6   mice 7.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 802.8237 802.8237 12.3858 0.0005
strain 28 59628.1523 2129.5769 32.8548 < 0.0001
sex:strain 28 16310.2353 582.5084 8.9869 < 0.0001
Residuals 389 25214.1365 64.8178


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 60 (60)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S1/SvImJ f 72.0 4.37   8 1.54 0.0607 65.6, 79.1 0.68
129S1/SvImJ m 37.1 9.17   8 3.24 0.247 20.9, 50.0 -1.89
A/J f 65.8 8.23   8 2.91 0.125 53.2, 76.9 0.25
A/J m 68.4 9.7   8 3.43 0.142 48.2, 77.4 0.82
AKR/J m 60.1 17.3   5 7.74 0.288 42.4, 88.6 0.1
BALB/cByJ f 68.3 3.39   8 1.2 0.0497 63.9, 73.5 0.43
BALB/cByJ m 57.6 6.45   8 2.28 0.112 45.0, 66.5 -0.11
BTBR T+ Itpr3tf/J f 80.5 1.83   8 0.646 0.0227 77.7, 83.8 1.27
BTBR T+ Itpr3tf/J m 71.6 6.47   7 2.45 0.0905 58.9, 78.0 1.1
BUB/BnJ f 72.6 8.32   6 3.4 0.115 59.4, 82.2 0.72
BUB/BnJ m 74.6 4.56   9 1.52 0.0611 68.4, 80.4 1.36
C3H/HeJ f 20.4 4.29   8 1.52 0.21 16.0, 29.6 -2.88
C3H/HeJ m 40.1 6.79   8 2.4 0.169 35.5, 55.0 -1.63
C57BL/10J f 52.5 8.93   8 3.16 0.17 36.1, 61.1 -0.66
C57BL/10J m 74.4 5.69   7 2.15 0.0765 63.8, 79.2 1.34
C57BL/6J f 50.3 10.6   8 3.75 0.211 29.2, 62.0 -0.81
C57BL/6J m 59.4 4.86   8 1.72 0.0818 54.9, 67.3 0.04
C57BLKS/J f 70.1 8.83   8 3.12 0.126 54.6, 78.4 0.55
C57BLKS/J m 68.3 4.23   8 1.49 0.0619 61.9, 73.9 0.81
C57BR/cdJ f 64.3 6.14   8 2.17 0.0953 56.2, 76.4 0.15
C57BR/cdJ m 69.0 7.69   8 2.72 0.112 55.4, 81.3 0.87
C57L/J f 64.9 6.65   7 2.51 0.102 51.5, 70.2 0.19
C57L/J m 68.0 6.88   8 2.43 0.101 53.0, 76.2 0.79
CAST/EiJ f 78.3 5.67   3 3.27 0.0725 71.8, 82.4 1.12
CBA/J f 53.9 20.5   8 7.24 0.38 4.82, 67.4 -0.57
CBA/J m 51.7 8.84   8 3.13 0.171 37.5, 64.8 -0.63
DBA/2J f 44.6 9.23   6 3.77 0.207 28.6, 54.0 -1.21
DBA/2J m 59.5 8.71   7 3.29 0.147 42.6, 66.8 0.05
FVB/NJ f 74.7 5.14   8 1.82 0.0687 66.6, 81.8 0.87
FVB/NJ m 57.6 10.2   8 3.61 0.177 40.3, 72.3 -0.11
KK/HlJ f 46.9 2.93   8 1.04 0.0626 40.0, 49.4 -1.05
KK/HlJ m 41.4 10.4   8 3.66 0.25 25.7, 54.3 -1.52
LP/J f 68.5 6.44   7 2.44 0.094 55.5, 75.4 0.44
LP/J m 63.3 8.55   8 3.02 0.135 51.6, 73.4 0.38
MOLF/EiJ f 60.9 3.34   7 1.26 0.0548 55.9, 64.8 -0.08
MOLF/EiJ m 46.2 12.4   9 4.15 0.269 22.4, 62.2 -1.1
MRL/MpJ f 37.1 7.49   8 2.65 0.202 27.4, 48.4 -1.72
MRL/MpJ m 41.5 12.2   8 4.32 0.295 21.4, 57.6 -1.51
NON/ShiLtJ f 41.3 6.14   8 2.17 0.149 28.4, 47.4 -1.44
NON/ShiLtJ m 49.0 9.39   6 3.83 0.191 37.5, 60.2 -0.86
NZO/HlLtJ f 61.7 8.17   7 3.09 0.132 46.5, 70.6 -0.03
NZO/HlLtJ m 61.0 15.4   7 5.8 0.252 33.9, 78.3 0.18
NZW/LacJ f 80.5 1.82   8 0.643 0.0226 77.0, 83.1 1.27
NZW/LacJ m 52.9 7.33   8 2.59 0.139 40.7, 61.3 -0.52
P/J f 70.1 7.31   8 2.59 0.104 59.6, 82.0 0.55
P/J m 66.4 4.02   7 1.52 0.0606 59.5, 72.7 0.65
PL/J f 52.8 9.62   7 3.64 0.182 42.4, 71.8 -0.64
PL/J m 46.4 4.0   6 1.63 0.0862 39.6, 50.6 -1.08
PWD/PhJ f 59.2 10.9   8 3.85 0.184 35.6, 71.9 -0.2
PWD/PhJ m 65.6 5.35   8 1.89 0.0816 57.9, 74.9 0.58
RIIIS/J f 87.6 3.44   8 1.22 0.0392 82.6, 92.1 1.76
RIIIS/J m 82.0 7.5   8 2.65 0.0915 65.1, 88.6 2.0
SJL/J f 67.5 8.84   8 3.13 0.131 48.6, 74.9 0.37
SJL/J m 60.5 6.81   9 2.27 0.113 46.0, 69.2 0.14
SM/J f 72.4 3.7   8 1.31 0.0511 67.9, 76.9 0.71
SM/J m 66.6 7.03   8 2.49 0.106 52.5, 74.6 0.67
SWR/J f 66.8 4.89   7 1.85 0.0732 56.1, 70.8 0.32
SWR/J m 61.5 6.17   7 2.33 0.1 52.5, 67.5 0.22
WSB/EiJ f 57.1 8.29   8 2.93 0.145 48.1, 67.8 -0.35
WSB/EiJ m 45.7 10.4   8 3.67 0.228 30.0, 58.9 -1.15


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 72.025 2.8464 77.6213 66.4287
129S1/SvImJ m 37.1 2.8464 42.6963 31.5037
A/J f 65.7875 2.8464 71.3838 60.1912
A/J m 68.4125 2.8464 74.0088 62.8162
BALB/cByJ f 68.3125 2.8464 73.9088 62.7162
BALB/cByJ m 57.625 2.8464 63.2213 52.0287
BTBR T+ Itpr3tf/J f 80.4625 2.8464 86.0588 74.8662
BTBR T+ Itpr3tf/J m 71.5571 3.043 77.5399 65.5744
BUB/BnJ f 72.6167 3.2868 79.0788 66.1546
BUB/BnJ m 74.6 2.6837 79.8763 69.3237
C3H/HeJ f 20.4125 2.8464 26.0088 14.8162
C3H/HeJ m 40.125 2.8464 45.7213 34.5287
C57BL/10J f 52.4875 2.8464 58.0838 46.8912
C57BL/10J m 74.4286 3.043 80.4113 68.4458
C57BL/6J f 50.275 2.8464 55.8713 44.6787
C57BL/6J m 59.45 2.8464 65.0463 53.8537
C57BLKS/J f 70.1 2.8464 75.6963 64.5037
C57BLKS/J m 68.325 2.8464 73.9213 62.7287
C57BR/cdJ f 64.35 2.8464 69.9463 58.7537
C57BR/cdJ m 69.0 2.8464 74.5963 63.4037
C57L/J f 64.9143 3.043 70.897 58.9316
C57L/J m 67.9875 2.8464 73.5838 62.3912
CBA/J f 53.89 2.8464 59.4863 48.2937
CBA/J m 51.6625 2.8464 57.2588 46.0662
DBA/2J f 44.6 3.2868 51.0621 38.1379
DBA/2J m 59.4571 3.043 65.4399 53.4744
FVB/NJ f 74.7125 2.8464 80.3088 69.1162
FVB/NJ m 57.575 2.8464 63.1713 51.9787
KK/HlJ f 46.8625 2.8464 52.4588 41.2662
KK/HlJ m 41.3625 2.8464 46.9588 35.7662
LP/J f 68.5286 3.043 74.5113 62.5458
LP/J m 63.325 2.8464 68.9213 57.7287
MOLF/EiJ f 60.9143 3.043 66.897 54.9316
MOLF/EiJ m 46.2111 2.6837 51.4874 40.9348
MRL/MpJ f 37.15 2.8464 42.7463 31.5537
MRL/MpJ m 41.5 2.8464 47.0963 35.9037
NON/ShiLtJ f 41.275 2.8464 46.8713 35.6787
NON/ShiLtJ m 49.0333 3.2868 55.4954 42.5712
NZO/HlLtJ f 61.7 3.043 67.6827 55.7173
NZO/HlLtJ m 61.0286 3.043 67.0113 55.0458
NZW/LacJ f 80.5375 2.8464 86.1338 74.9412
NZW/LacJ m 52.9 2.8464 58.4963 47.3037
P/J f 70.1125 2.8464 75.7088 64.5162
P/J m 66.3714 3.043 72.3542 60.3887
PL/J f 52.8 3.043 58.7827 46.8173
PL/J m 46.4333 3.2868 52.8954 39.9712
PWD/PhJ f 59.1875 2.8464 64.7838 53.5912
PWD/PhJ m 65.575 2.8464 71.1713 59.9787
RIIIS/J f 87.575 2.8464 93.1713 81.9787
RIIIS/J m 81.9625 2.8464 87.5588 76.3662
SJL/J f 67.4875 2.8464 73.0838 61.8912
SJL/J m 60.5333 2.6837 65.8096 55.2571
SM/J f 72.3625 2.8464 77.9588 66.7662
SM/J m 66.575 2.8464 72.1713 60.9787
SWR/J f 66.7571 3.043 72.7399 60.7744
SWR/J m 61.5 3.043 67.4827 55.5173
WSB/EiJ f 57.1375 2.8464 62.7338 51.5412
WSB/EiJ m 45.6625 2.8464 51.2588 40.0662


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 54.5625 2.0127 58.5197 50.6053
A/J both 67.1 2.0127 71.0572 63.1428
BALB/cByJ both 62.9688 2.0127 66.926 59.0115
BTBR T+ Itpr3tf/J both 76.0098 2.0834 80.1059 71.9137
BUB/BnJ both 73.6083 2.1216 77.7796 69.4371
C3H/HeJ both 30.2688 2.0127 34.226 26.3115
C57BL/10J both 63.458 2.0834 67.5541 59.3619
C57BL/6J both 54.8625 2.0127 58.8197 50.9053
C57BLKS/J both 69.2125 2.0127 73.1697 65.2553
C57BR/cdJ both 66.675 2.0127 70.6322 62.7178
C57L/J both 66.4509 2.0834 70.547 62.3548
CBA/J both 52.7762 2.0127 56.7335 48.819
DBA/2J both 52.0286 2.2396 56.4317 47.6254
FVB/NJ both 66.1438 2.0127 70.101 62.1865
KK/HlJ both 44.1125 2.0127 48.0697 40.1553
LP/J both 65.9268 2.0834 70.0229 61.8307
MOLF/EiJ both 53.5627 2.0286 57.5512 49.5742
MRL/MpJ both 39.325 2.0127 43.2822 35.3678
NON/ShiLtJ both 45.1542 2.174 49.4284 40.8799
NZO/HlLtJ both 61.3643 2.1517 65.5947 57.1339
NZW/LacJ both 66.7187 2.0127 70.676 62.7615
P/J both 68.242 2.0834 72.3381 64.1459
PL/J both 49.6167 2.2396 54.0198 45.2135
PWD/PhJ both 62.3813 2.0127 66.3385 58.424
RIIIS/J both 84.7687 2.0127 88.726 80.8115
SJL/J both 64.0104 1.956 67.8561 60.1647
SM/J both 69.4688 2.0127 73.426 65.5115
SWR/J both 64.1286 2.1517 68.359 59.8981
WSB/EiJ both 51.4 2.0127 55.3572 47.4428




  GWAS USING LINEAR MIXED MODELS

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