Project measure / variable:   Petkova1   LYM_M06

ID, description, units MPD:24206   LYM_M06   lymphocyte differential (LYM; percentage of total WBC)   [%]  at age 6mo  
Data set, strains Petkova1   inbred   32 strains     sex: both     age: 26wks
Procedure immune cell quantification
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Petkova1 - lymphocyte differential (LYM; percentage of total WBC) at age 6mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested32 strains31 strains
Mean of the strain means65.5   % 62.3   %
Median of the strain means66.8   % 62.5   %
SD of the strain means± 10.9 ± 11.6
Coefficient of variation (CV)0.166 0.186
Min–max range of strain means43.0   –   86.0   % 36.0   –   80.6   %
Mean sample size per strain8.0   mice 7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1081.1573 1081.1573 22.9499 < 0.0001
strain 30 50193.7452 1673.1248 35.5156 < 0.0001
sex:strain 30 10452.8097 348.427 7.3961 < 0.0001
Residuals 435 20492.6562 47.1096


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 49.4 6.93   8 2.45 0.14 42.4, 59.6 -1.48
129S1/SvImJ m 60.5 2.04   8 0.722 0.0337 58.2, 64.4 -0.15
A/J f 65.6 4.4   8 1.56 0.0672 58.9, 72.5 0.01
A/J m 57.2 12.0   8 4.25 0.21 38.6, 71.7 -0.44
AKR/J f 43.0 13.2   8 4.68 0.308 12.6, 56.4 -2.07
AKR/J m 55.2 7.08   8 2.5 0.128 42.3, 63.9 -0.61
BALB/cByJ f 66.3 2.96   8 1.05 0.0447 61.3, 69.7 0.07
BALB/cByJ m 64.5 5.55   8 1.96 0.0861 52.6, 71.0 0.19
BTBR T+ Itpr3tf/J f 74.4 4.32   8 1.53 0.058 68.1, 82.1 0.82
BTBR T+ Itpr3tf/J m 68.3 2.8   8 0.991 0.0411 64.3, 73.8 0.52
BUB/BnJ f 73.6 4.48   8 1.59 0.0609 63.3, 77.0 0.74
BUB/BnJ m 69.2 9.43   8 3.34 0.136 52.3, 80.1 0.6
C3H/HeJ f 46.6 5.66   8 2.0 0.121 36.3, 55.3 -1.74
C3H/HeJ m 36.0 8.47   8 2.99 0.235 23.4, 48.8 -2.26
C57BL/10J f 73.7 3.95   8 1.39 0.0535 67.6, 80.9 0.75
C57BL/10J m 78.2 4.51   8 1.59 0.0576 69.0, 82.4 1.37
C57BL/6J f 71.6 4.35   8 1.54 0.0608 65.0, 77.2 0.56
C57BL/6J m 78.2 3.25   8 1.15 0.0416 73.7, 82.3 1.37
C57BLKS/J f 71.8 6.93   8 2.45 0.0965 60.3, 79.1 0.58
C57BLKS/J m 68.1 17.5   8 6.17 0.256 37.8, 81.2 0.5
C57BR/cdJ f 77.1 2.42   8 0.856 0.0314 73.7, 81.8 1.06
C57BR/cdJ m 78.5 3.0   8 1.06 0.0382 73.2, 82.2 1.4
C57L/J f 75.2 3.12   8 1.1 0.0415 69.7, 79.8 0.89
C57L/J m 80.6 4.87   8 1.72 0.0604 69.9, 85.4 1.58
CAST/EiJ f 73.6 3.39   6 1.38 0.0461 70.0, 78.8 0.74
CBA/J f 61.8 6.1   8 2.16 0.0987 53.0, 71.7 -0.34
CBA/J m 63.0 7.9   8 2.79 0.125 49.4, 71.8 0.06
DBA/2J f 63.0 3.71   8 1.31 0.0588 54.2, 65.9 -0.23
DBA/2J m 60.5 10.6   8 3.75 0.176 35.0, 67.5 -0.15
FVB/NJ f 79.9 2.29   8 0.81 0.0287 76.2, 82.9 1.32
FVB/NJ m 52.6 7.49   8 2.65 0.142 42.3, 62.4 -0.83
KK/HlJ f 49.0 7.65   8 2.71 0.156 34.1, 58.0 -1.52
KK/HlJ m 43.7 7.08   8 2.5 0.162 34.0, 53.6 -1.6
LP/J f 65.3 9.83   8 3.48 0.151 52.4, 82.8 -0.02
LP/J m 56.8 6.7   8 2.37 0.118 46.2, 67.3 -0.47
MOLF/EiJ f 64.2 4.06   7 1.53 0.0633 56.4, 67.6 -0.12
MOLF/EiJ m 62.5 3.68   8 1.3 0.0589 56.7, 68.2 0.02
MRL/MpJ f 44.3 4.13   8 1.46 0.0933 40.6, 52.6 -1.95
MRL/MpJ m 49.7 5.72   8 2.02 0.115 41.2, 57.4 -1.08
NOD.B10Sn-H2b/J f 55.0 4.37   9 1.46 0.0794 50.0, 63.4 -0.97
NOD.B10Sn-H2b/J m 42.0 3.19   7 1.21 0.076 37.1, 46.7 -1.75
NON/ShiLtJ f 62.4 5.74   8 2.03 0.0919 49.7, 69.4 -0.29
NON/ShiLtJ m 41.4 9.23   8 3.26 0.223 24.2, 55.5 -1.8
NZO/HlLtJ f 67.8 4.58   8 1.62 0.0675 62.3, 77.6 0.21
NZO/HlLtJ m 63.5 4.02   8 1.42 0.0632 57.5, 69.8 0.11
NZW/LacJ f 60.2 2.16   8 0.765 0.0359 56.3, 62.4 -0.49
NZW/LacJ m 59.4 2.43   8 0.86 0.041 56.5, 63.4 -0.25
P/J f 53.0 14.3   8 5.07 0.27 21.8, 68.3 -1.15
P/J m 71.7 3.11   8 1.1 0.0433 67.0, 76.7 0.81
PL/J f 78.2 2.75   7 1.04 0.0352 74.3, 81.6 1.16
PL/J m 72.2 2.31   7 0.871 0.0319 69.6, 75.4 0.86
PWD/PhJ f 69.2 4.04   8 1.43 0.0583 63.5, 76.3 0.34
PWD/PhJ m 65.3 4.15   8 1.47 0.0635 56.6, 68.9 0.26
RIIIS/J f 86.0 3.58   8 1.27 0.0416 81.6, 91.0 1.88
RIIIS/J m 78.6 5.7   8 2.01 0.0725 70.5, 87.8 1.41
SJL/J f 75.2 5.9   8 2.08 0.0784 65.4, 82.0 0.89
SJL/J m 58.7 20.1   6 8.21 0.343 25.7, 80.3 -0.31
SM/J f 68.7 9.31   16 2.33 0.135 53.1, 79.5 0.29
SM/J m 71.2 2.63   8 0.931 0.037 67.1, 74.7 0.77
SWR/J f 64.5 6.86   8 2.42 0.106 52.8, 75.0 -0.09
SWR/J m 61.0 5.45   8 1.93 0.0893 53.7, 67.9 -0.11
WSB/EiJ f 67.3 4.21   8 1.49 0.0626 62.9, 74.2 0.16
WSB/EiJ m 62.0 4.45   6 1.82 0.0718 58.0, 70.0 -0.02


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 49.4375 2.4267 54.2069 44.6681
129S1/SvImJ m 60.5 2.4267 65.2694 55.7306
A/J f 65.575 2.4267 70.3444 60.8056
A/J m 57.2 2.4267 61.9694 52.4306
AKR/J f 43.0375 2.4267 47.8069 38.2681
AKR/J m 55.1625 2.4267 59.9319 50.3931
BALB/cByJ f 66.3375 2.4267 71.1069 61.5681
BALB/cByJ m 64.4625 2.4267 69.2319 59.6931
BTBR T+ Itpr3tf/J f 74.4375 2.4267 79.2069 69.6681
BTBR T+ Itpr3tf/J m 68.275 2.4267 73.0444 63.5056
BUB/BnJ f 73.6375 2.4267 78.4069 68.8681
BUB/BnJ m 69.1875 2.4267 73.9569 64.4181
C3H/HeJ f 46.65 2.4267 51.4194 41.8806
C3H/HeJ m 36.0 2.4267 40.7694 31.2306
C57BL/10J f 73.7125 2.4267 78.4819 68.9431
C57BL/10J m 78.2375 2.4267 83.0069 73.4681
C57BL/6J f 71.5625 2.4267 76.3319 66.7931
C57BL/6J m 78.2 2.4267 82.9694 73.4306
C57BLKS/J f 71.75 2.4267 76.5194 66.9806
C57BLKS/J m 68.15 2.4267 72.9194 63.3806
C57BR/cdJ f 77.125 2.4267 81.8944 72.3556
C57BR/cdJ m 78.45 2.4267 83.2194 73.6806
C57L/J f 75.175 2.4267 79.9444 70.4056
C57L/J m 80.6125 2.4267 85.3819 75.8431
CBA/J f 61.825 2.4267 66.5944 57.0556
CBA/J m 63.025 2.4267 67.7944 58.2556
DBA/2J f 63.0 2.4267 67.7694 58.2306
DBA/2J m 60.5125 2.4267 65.2819 55.7431
FVB/NJ f 79.9125 2.4267 84.6819 75.1431
FVB/NJ m 52.5875 2.4267 57.3569 47.8181
KK/HlJ f 48.9875 2.4267 53.7569 44.2181
KK/HlJ m 43.7125 2.4267 48.4819 38.9431
LP/J f 65.2625 2.4267 70.0319 60.4931
LP/J m 56.75 2.4267 61.5194 51.9806
MOLF/EiJ f 64.1714 2.5942 69.2702 59.0727
MOLF/EiJ m 62.525 2.4267 67.2944 57.7556
MRL/MpJ f 44.3 2.4267 49.0694 39.5306
MRL/MpJ m 49.675 2.4267 54.4444 44.9056
NOD.B10Sn-H2b/J f 54.9889 2.2879 59.4856 50.4922
NOD.B10Sn-H2b/J m 42.0286 2.5942 47.1273 36.9298
NON/ShiLtJ f 62.425 2.4267 67.1944 57.6556
NON/ShiLtJ m 41.4125 2.4267 46.1819 36.6431
NZO/HlLtJ f 67.825 2.4267 72.5944 63.0556
NZO/HlLtJ m 63.525 2.4267 68.2944 58.7556
NZW/LacJ f 60.1875 2.4267 64.9569 55.4181
NZW/LacJ m 59.3625 2.4267 64.1319 54.5931
P/J f 53.0 2.4267 57.7694 48.2306
P/J m 71.725 2.4267 76.4944 66.9556
PL/J f 78.1714 2.5942 83.2702 73.0727
PL/J m 72.1857 2.5942 77.2845 67.087
PWD/PhJ f 69.1875 2.4267 73.9569 64.4181
PWD/PhJ m 65.325 2.4267 70.0944 60.5556
RIIIS/J f 86.0125 2.4267 90.7819 81.2431
RIIIS/J m 78.6375 2.4267 83.4069 73.8681
SJL/J f 75.1875 2.4267 79.9569 70.4181
SJL/J m 58.65 2.8021 64.1573 53.1427
SM/J f 68.7 1.7159 72.0725 65.3275
SM/J m 71.1625 2.4267 75.9319 66.3931
SWR/J f 64.525 2.4267 69.2944 59.7556
SWR/J m 61.0 2.4267 65.7694 56.2306
WSB/EiJ f 67.3 2.4267 72.0694 62.5306
WSB/EiJ m 62.0333 2.8021 67.5406 56.5261


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 54.9687 1.7159 58.3413 51.5962
A/J both 61.3875 1.7159 64.76 58.015
AKR/J both 49.1 1.7159 52.4725 45.7275
BALB/cByJ both 65.4 1.7159 68.7725 62.0275
BTBR T+ Itpr3tf/J both 71.3562 1.7159 74.7288 67.9837
BUB/BnJ both 71.4125 1.7159 74.785 68.04
C3H/HeJ both 41.325 1.7159 44.6975 37.9525
C57BL/10J both 75.975 1.7159 79.3475 72.6025
C57BL/6J both 74.8812 1.7159 78.2538 71.5087
C57BLKS/J both 69.95 1.7159 73.3225 66.5775
C57BR/cdJ both 77.7875 1.7159 81.16 74.415
C57L/J both 77.8937 1.7159 81.2663 74.5212
CBA/J both 62.425 1.7159 65.7975 59.0525
DBA/2J both 61.7562 1.7159 65.1288 58.3837
FVB/NJ both 66.25 1.7159 69.6225 62.8775
KK/HlJ both 46.35 1.7159 49.7225 42.9775
LP/J both 61.0062 1.7159 64.3788 57.6337
MOLF/EiJ both 63.3482 1.7761 66.8391 59.8573
MRL/MpJ both 46.9875 1.7159 50.36 43.615
NOD.B10Sn-H2b/J both 48.5087 1.7295 51.9079 45.1096
NON/ShiLtJ both 51.9187 1.7159 55.2913 48.5462
NZO/HlLtJ both 65.675 1.7159 69.0475 62.3025
NZW/LacJ both 59.775 1.7159 63.1475 56.4025
P/J both 62.3625 1.7159 65.735 58.99
PL/J both 75.1786 1.8344 78.7839 71.5732
PWD/PhJ both 67.2563 1.7159 70.6288 63.8837
RIIIS/J both 82.325 1.7159 85.6975 78.9525
SJL/J both 66.9188 1.8534 70.5615 63.276
SM/J both 69.9312 1.486 72.8519 67.0106
SWR/J both 62.7625 1.7159 66.135 59.39
WSB/EiJ both 64.6667 1.8534 68.3094 61.0239




  GWAS USING LINEAR MIXED MODELS