Project measure / variable:   Petkova1   WBC_M24

ID, description, units MPD:24204   WBC_M24   white blood cell count (WBC; per volume x 103)   [n/µL]  at age 24mo  
Data set, strains Petkova1   inbred   12 strains     sex: both     age: 104wks
Procedure immune cell quantification
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  STRAIN COMPARISON PLOT
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Petkova1 - white blood cell count (WBC; per volume x 103) at age 24mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested11 strains11 strains
Mean of the strain means35.1   n/µL 31.7   n/µL
Median of the strain means29.1   n/µL 30.4   n/µL
SD of the strain means± 17.7 ± 6.65
Coefficient of variation (CV)0.504 0.209
Min–max range of strain means24.2   –   86.0   n/µL 23.6   –   47.2   n/µL
Mean sample size per strain7.0   mice 7.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 179.0159 179.0159 2.6444 0.1065
strain 9 2797.4521 310.828 4.5915 < 0.0001
sex:strain 9 1806.4656 200.7184 2.965 0.0032
Residuals 121 8191.2772 67.6965


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 24.3 4.25   6 1.74 0.175 18.0, 30.1 -0.61
129S1/SvImJ m 29.1 7.58   7 2.86 0.26 20.4, 40.2 -0.4
BALB/cByJ f 86.0 127.0   7 48.0 1.48 17.1, 363.0 2.88
C3H/HeJ m 26.0 5.6   8 1.98 0.215 19.5, 36.3 -0.86
C57BL/10J f 24.2 7.0   8 2.47 0.29 17.9, 37.5 -0.62
C57BL/10J m 30.4 15.0   6 6.12 0.493 10.9, 54.7 -0.2
C57BL/6J f 26.4 9.34   8 3.3 0.353 15.2, 39.6 -0.49
C57BL/6J m 40.1 10.5   8 3.72 0.263 29.0, 63.2 1.26
C57BLKS/J f 39.2 7.24   6 2.95 0.184 32.5, 49.9 0.23
C57BLKS/J m 23.6 8.74   7 3.3 0.37 12.9, 37.1 -1.23
C57BR/cdJ f 28.0 7.85   7 2.97 0.281 19.8, 43.8 -0.4
C57BR/cdJ m 31.8 6.72   9 2.24 0.212 18.6, 41.7 0.01
LP/J f 39.6 10.9   8 3.86 0.275 26.3, 59.9 0.26
LP/J m 47.2 13.4   6 5.45 0.283 35.9, 67.9 2.32
NON/ShiLtJ f 30.2 5.63   8 1.99 0.186 20.5, 37.5 -0.28
NON/ShiLtJ m 31.9 7.71   7 2.91 0.241 22.0, 46.1 0.02
NZW/LacJ f 27.2 8.89   6 3.63 0.326 17.5, 41.3 -0.45
NZW/LacJ m 27.1 8.0   7 3.02 0.296 19.1, 41.9 -0.7
PWD/PhJ f 31.6 4.62   7 1.74 0.146 26.7, 41.1 -0.2
PWD/PhJ m 29.9 5.47   7 2.07 0.183 21.0, 38.5 -0.28
WSB/EiJ f 29.1 2.51   6 1.03 0.0865 26.2, 32.5 -0.34
WSB/EiJ m 32.1 2.18   7 0.823 0.0677 30.1, 35.3 0.05


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 24.2833 3.359 30.9333 17.6333
129S1/SvImJ m 29.1429 3.1098 35.2995 22.9862
C57BL/10J f 24.15 2.909 29.9091 18.3909
C57BL/10J m 30.4 3.359 37.05 23.75
C57BL/6J f 26.45 2.909 32.2091 20.6909
C57BL/6J m 40.125 2.909 45.8841 34.3659
C57BLKS/J f 39.25 3.359 45.9 32.6
C57BLKS/J m 23.6429 3.1098 29.7995 17.4862
C57BR/cdJ f 27.9714 3.1098 34.1281 21.8147
C57BR/cdJ m 31.7556 2.7426 37.1852 26.3259
LP/J f 39.6375 2.909 45.3966 33.8784
LP/J m 47.2333 3.359 53.8833 40.5833
NON/ShiLtJ f 30.225 2.909 35.9841 24.4659
NON/ShiLtJ m 31.9286 3.1098 38.0853 25.7719
NZW/LacJ f 27.2333 3.359 33.8833 20.5833
NZW/LacJ m 27.0571 3.1098 33.2138 20.9005
PWD/PhJ f 31.5857 3.1098 37.7424 25.429
PWD/PhJ m 29.9429 3.1098 36.0995 23.7862
WSB/EiJ f 29.0667 3.359 35.7167 22.4167
WSB/EiJ m 32.1429 3.1098 38.2995 25.9862


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 26.7131 2.2888 31.2443 22.1819
C57BL/10J both 27.275 2.2218 31.6736 22.8764
C57BL/6J both 33.2875 2.0569 37.3598 29.2152
C57BLKS/J both 31.4464 2.2888 35.9776 26.9152
C57BR/cdJ both 29.8635 2.0732 33.968 25.759
LP/J both 43.4354 2.2218 47.834 39.0369
NON/ShiLtJ both 31.0768 2.1291 35.292 26.8616
NZW/LacJ both 27.1452 2.2888 31.6764 22.614
PWD/PhJ both 30.7643 2.199 35.1177 26.4108
WSB/EiJ both 30.6048 2.2888 35.136 26.0736




  GWAS USING LINEAR MIXED MODELS