Project measure / variable:   Petkova1   WBC_M18

ID, description, units MPD:24203   WBC_M18   white blood cell count (WBC; per volume x 103)   [n/µL]  at age 18mo  
Data set, strains Petkova1   inbred   30 strains     sex: both     age: 78wks
Procedure immune cell quantification
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  STRAIN COMPARISON PLOT
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Petkova1 - white blood cell count (WBC; per volume x 103) at age 18mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested29 strains25 strains
Mean of the strain means30.2   n/µL 26.5   n/µL
Median of the strain means26.0   n/µL 23.7   n/µL
SD of the strain means± 17.1 ± 7.64
Coefficient of variation (CV)0.566 0.288
Min–max range of strain means13.9   –   102   n/µL 17.8   –   40.4   n/µL
Mean sample size per strain7.3   mice 6.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1317.2155 1317.2155 2.1516 0.1436
strain 22 35100.3154 1595.4689 2.6061 0.0002
sex:strain 22 24088.0791 1094.9127 1.7885 0.0179
Residuals 277 169578.8892 612.1982


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 29.4 7.95   7 3.01 0.271 20.8, 45.5 -0.04
129S1/SvImJ m 25.1 4.01   8 1.42 0.16 19.1, 31.5 -0.19
A/J f 17.1 2.6   8 0.918 0.152 14.4, 21.6 -0.76
BALB/cByJ f 33.8 29.3   8 10.4 0.867 20.0, 106.0 0.21
BALB/cByJ m 25.9 5.48   6 2.24 0.212 20.4, 32.5 -0.08
BTBR T+ Itpr3tf/J f 27.7 6.2   8 2.19 0.224 17.7, 36.0 -0.14
BTBR T+ Itpr3tf/J m 36.5 4.94   5 2.21 0.135 30.7, 43.7 1.31
BUB/BnJ f 44.9 18.8   8 6.64 0.418 32.3, 88.6 0.86
BUB/BnJ m 35.8 9.86   6 4.03 0.275 25.8, 53.6 1.21
C3H/HeJ f 21.6 7.48   8 2.65 0.347 12.0, 36.7 -0.5
C3H/HeJ m 22.4 6.27   8 2.22 0.28 11.5, 32.6 -0.54
C57BL/10J f 32.7 7.58   7 2.86 0.232 25.5, 48.2 0.15
C57BL/10J m 19.3 0.0   1   0.0 0.0 19.3, 19.3 -0.95
C57BL/6J f 25.5 7.0   8 2.47 0.274 9.89, 32.4 -0.27
C57BL/6J m 29.9 6.02   7 2.28 0.201 20.9, 39.0 0.44
C57BLKS/J f 33.9 5.24   7 1.98 0.155 25.1, 40.8 0.22
C57BR/cdJ f 30.6 12.3   8 4.35 0.401 18.8, 57.4 0.03
C57BR/cdJ m 36.6 13.6   8 4.82 0.373 22.9, 66.6 1.32
C57L/J f 20.1 2.84   8 1.01 0.141 14.2, 22.9 -0.59
C57L/J m 40.4 5.52   6 2.25 0.136 34.8, 49.8 1.82
CBA/J f 13.9 4.67   7 1.77 0.337 8.8, 21.5 -0.95
CBA/J m 20.8 3.09   6 1.26 0.148 16.2, 24.4 -0.75
DBA/2J f 22.2 5.41   7 2.04 0.244 15.2, 29.1 -0.47
DBA/2J m 22.2 4.29   8 1.52 0.193 15.9, 30.3 -0.57
FVB/NJ f 15.7 1.95   8 0.688 0.124 12.1, 18.6 -0.85
KK/HlJ f 40.0 11.7   7 4.42 0.292 25.3, 54.9 0.58
KK/HlJ m 31.2 5.66   7 2.14 0.181 20.0, 37.7 0.61
LP/J f 30.2 7.9   7 2.99 0.261 16.3, 39.7 0.0
LP/J m 38.9 6.43   8 2.28 0.165 27.7, 48.4 1.62
MOLF/EiJ f 33.9 11.0   9 3.68 0.326 16.9, 48.0 0.22
MOLF/EiJ m 37.0 11.2   7 4.24 0.303 19.4, 51.2 1.37
MRL/MpJ f 18.9 5.22   6 2.13 0.276 12.4, 26.1 -0.66
MRL/MpJ m 19.7 5.33   8 1.88 0.27 11.1, 27.0 -0.89
NOD.B10Sn-H2b/J f 22.7 7.73   7 2.92 0.34 13.9, 36.8 -0.44
NOD.B10Sn-H2b/J m 18.6 1.85   6 0.755 0.0994 16.4, 21.2 -1.04
NON/ShiLtJ f 23.8 2.7   7 1.02 0.113 20.0, 27.3 -0.37
NON/ShiLtJ m 22.8 6.77   7 2.56 0.297 15.1, 33.4 -0.49
NZO/HlLtJ f 48.1 18.5   3 10.7 0.385 35.7, 69.4 1.05
NZW/LacJ f 53.4 72.9   8 25.8 1.36 19.1, 233.0 1.36
NZW/LacJ m 35.5 13.4   7 5.07 0.378 22.7, 61.0 1.17
P/J f 26.0 11.1   5 4.98 0.428 9.39, 38.6 -0.24
P/J m 18.4 6.72   4 3.36 0.365 10.9, 25.5 -1.06
PL/J f 15.9 2.81   4 1.4 0.177 12.1, 18.9 -0.83
PL/J m 19.1 5.44   5 2.43 0.284 13.5, 27.3 -0.97
PWD/PhJ f 33.2 46.9   8 16.6 1.41 11.5, 149.0 0.18
PWD/PhJ m 22.0 5.12   8 1.81 0.233 18.1, 33.2 -0.59
RIIIS/J m 17.8 3.38   8 1.2 0.19 13.3, 23.3 -1.14
SJL/J f 18.9 4.43   8 1.57 0.235 15.1, 26.6 -0.66
SJL/J m 18.1 5.07   7 1.92 0.28 10.0, 24.3 -1.1
SM/J f 14.5 4.04   7 1.53 0.279 8.87, 19.6 -0.92
SWR/J f 102.0 126.0   7 47.7 1.23 23.4, 292.0 4.21
SWR/J m 23.7 6.19   6 2.53 0.261 17.2, 34.2 -0.37
WSB/EiJ f 23.8 4.22   8 1.49 0.177 20.0, 31.6 -0.37
WSB/EiJ m 25.4 3.3   7 1.25 0.13 21.1, 30.3 -0.15


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 29.3857 9.3518 47.7954 10.976
129S1/SvImJ m 25.1125 8.7478 42.3332 7.8918
BALB/cByJ f 33.8375 8.7478 51.0582 16.6168
BALB/cByJ m 25.8667 10.1011 45.7514 5.9819
BTBR T+ Itpr3tf/J f 27.7 8.7478 44.9207 10.4793
BTBR T+ Itpr3tf/J m 36.54 11.0652 58.3227 14.7573
BUB/BnJ f 44.9375 8.7478 62.1582 27.7168
BUB/BnJ m 35.8 10.1011 55.6848 15.9152
C3H/HeJ f 21.575 8.7478 38.7957 4.3543
C3H/HeJ m 22.4125 8.7478 39.6332 5.1918
C57BL/6J f 25.5363 8.7478 42.7569 8.3156
C57BL/6J m 29.9286 9.3518 48.3383 11.5189
C57BR/cdJ f 30.65 8.7478 47.8707 13.4293
C57BR/cdJ m 36.575 8.7478 53.7957 19.3543
C57L/J f 20.125 8.7478 37.3457 2.9043
C57L/J m 40.45 10.1011 60.3348 20.5652
CBA/J f 13.8714 9.3518 32.2811 0.0
CBA/J m 20.8167 10.1011 40.7014 0.9319
DBA/2J f 22.1857 9.3518 40.5954 3.776
DBA/2J m 22.2375 8.7478 39.4582 5.0168
KK/HlJ f 39.9714 9.3518 58.3811 21.5617
KK/HlJ m 31.1857 9.3518 49.5954 12.776
LP/J f 30.2429 9.3518 48.6526 11.8332
LP/J m 38.9 8.7478 56.1207 21.6793
MOLF/EiJ f 33.9222 8.2475 50.1581 17.6864
MOLF/EiJ m 37.0 9.3518 55.4097 18.5903
MRL/MpJ f 18.8833 10.1011 38.7681 0.0
MRL/MpJ m 19.725 8.7478 36.9457 2.5043
NOD.B10Sn-H2b/J f 22.7286 9.3518 41.1383 4.3189
NOD.B10Sn-H2b/J m 18.6 10.1011 38.4848 0.0
NON/ShiLtJ f 23.7857 9.3518 42.1954 5.376
NON/ShiLtJ m 22.7714 9.3518 41.1811 4.3617
NZW/LacJ f 53.3875 8.7478 70.6082 36.1668
NZW/LacJ m 35.5286 9.3518 53.9383 17.1189
P/J f 26.018 11.0652 47.8007 4.2353
P/J m 18.4 12.3713 42.7537 0.0
PL/J f 15.85 12.3713 40.2037 0.0
PL/J m 19.14 11.0652 40.9227 0.0
PWD/PhJ f 33.25 8.7478 50.4707 16.0293
PWD/PhJ m 21.9875 8.7478 39.2082 4.7668
SJL/J f 18.8875 8.7478 36.1082 1.6668
SJL/J m 18.1143 9.3518 36.524 0.0
SWR/J f 102.3857 9.3518 120.7954 83.976
SWR/J m 23.7333 10.1011 43.6181 3.8486
WSB/EiJ f 23.775 8.7478 40.9957 6.5543
WSB/EiJ m 25.4 9.3518 43.8097 6.9903


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 27.2491 6.4028 39.8534 14.6448
BALB/cByJ both 29.8521 6.6813 43.0046 16.6996
BTBR T+ Itpr3tf/J both 32.12 7.0527 46.0038 18.2362
BUB/BnJ both 40.3688 6.6813 53.5213 27.2162
C3H/HeJ both 21.9937 6.1857 34.1706 9.8169
C57BL/6J both 27.7324 6.4028 40.3367 15.1281
C57BR/cdJ both 33.6125 6.1857 45.7894 21.4356
C57L/J both 30.2875 6.6813 43.44 17.135
CBA/J both 17.344 6.8828 30.8932 3.7949
DBA/2J both 22.2116 6.4028 34.8159 9.6073
KK/HlJ both 35.5786 6.6127 48.5962 22.5609
LP/J both 34.5714 6.4028 47.1757 21.9672
MOLF/EiJ both 35.4611 6.2346 47.7342 23.188
MRL/MpJ both 19.3042 6.6813 32.4567 6.1516
NOD.B10Sn-H2b/J both 20.6643 6.8828 34.2135 7.1151
NON/ShiLtJ both 23.2786 6.6127 36.2962 10.2609
NZW/LacJ both 44.458 6.4028 57.0623 31.8538
P/J both 22.209 8.2989 38.546 5.872
PL/J both 17.495 8.2989 33.832 1.158
PWD/PhJ both 27.6188 6.1857 39.7956 15.4419
SJL/J both 18.5009 6.4028 31.1052 5.8966
SWR/J both 63.0595 6.8828 76.6087 49.5104
WSB/EiJ both 24.5875 6.4028 37.1918 11.9832




  GWAS USING LINEAR MIXED MODELS