Project measure / variable:   Petkova1   WBC_M12

ID, description, units MPD:24202   WBC_M12   white blood cell count (WBC; per volume x 103)   [n/µL]  at age 12mo  
Data set, strains Petkova1   inbred   31 strains     sex: both     age: 52wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested30 strains30 strains
Mean of the strain means31.0   n/µL 28.9   n/µL
Median of the strain means29.4   n/µL 28.5   n/µL
SD of the strain means± 8.75 ± 7.33
Coefficient of variation (CV)0.282 0.254
Min–max range of strain means14.8   –   59.4   n/µL 18.2   –   50.3   n/µL
Mean sample size per strain7.6   mice 7.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 471.1811 471.1811 2.816 0.0941
strain 28 20624.0014 736.5715 4.402 < 0.0001
sex:strain 28 9177.96 327.7843 1.959 0.0029
Residuals 390 65256.932 167.3255


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 60 (60)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S1/SvImJ f 19.1 3.71   8 1.31 0.194 15.8, 27.2 -1.36
129S1/SvImJ m 33.2 7.59   8 2.68 0.229 19.9, 40.8 0.59
A/J f 39.3 19.1   8 6.76 0.486 22.7, 70.9 0.95
A/J m 22.0 8.96   8 3.17 0.406 10.0, 34.3 -0.94
AKR/J m 32.7 16.6   5 7.43 0.508 17.1, 56.5 0.52
BALB/cByJ f 28.3 4.77   8 1.68 0.168 23.8, 37.5 -0.31
BALB/cByJ m 30.9 2.83   8 1.0 0.0916 26.8, 34.8 0.27
BTBR T+ Itpr3tf/J f 22.9 6.05   8 2.14 0.264 13.0, 29.5 -0.93
BTBR T+ Itpr3tf/J m 24.8 7.57   7 2.86 0.305 14.8, 37.1 -0.56
BUB/BnJ f 40.1 8.51   6 3.47 0.212 27.1, 51.5 1.04
BUB/BnJ m 30.6 4.79   9 1.6 0.157 24.4, 40.9 0.23
C3H/HeJ f 21.6 7.97   8 2.82 0.369 12.8, 34.5 -1.07
C3H/HeJ m 22.5 3.92   8 1.39 0.174 18.5, 28.8 -0.87
C57BL/10J f 34.0 6.61   8 2.34 0.194 27.9, 48.5 0.34
C57BL/10J m 28.6 6.54   7 2.47 0.229 22.2, 39.9 -0.04
C57BL/6J f 27.2 7.38   8 2.61 0.271 11.8, 35.6 -0.43
C57BL/6J m 32.0 5.15   8 1.82 0.161 23.2, 38.9 0.42
C57BLKS/J f 33.9 4.72   8 1.67 0.139 27.2, 40.1 0.33
C57BLKS/J m 39.3 19.1   8 6.76 0.486 22.7, 70.9 1.42
C57BR/cdJ f 59.4 46.8   8 16.5 0.788 23.0, 141.0 3.25
C57BR/cdJ m 28.3 4.77   8 1.68 0.168 23.8, 37.5 -0.08
C57L/J f 40.2 21.4   7 8.09 0.533 12.5, 71.5 1.05
C57L/J m 38.2 11.1   8 3.91 0.289 28.3, 54.0 1.27
CAST/EiJ f 27.6 7.77   3 4.48 0.282 18.6, 32.2 -0.39
CBA/J f 36.5 31.8   8 11.3 0.872 17.3, 113.0 0.63
CBA/J m 27.4 12.8   8 4.53 0.468 19.7, 58.6 -0.2
DBA/2J f 35.2 9.51   6 3.88 0.27 25.2, 50.0 0.48
DBA/2J m 24.7 13.4   7 5.05 0.54 15.5, 54.2 -0.57
FVB/NJ f 25.7 12.7   8 4.48 0.493 15.5, 54.2 -0.61
FVB/NJ m 23.1 6.88   8 2.43 0.298 15.2, 38.9 -0.79
KK/HlJ f 30.7 5.08   8 1.8 0.165 22.9, 38.7 -0.03
KK/HlJ m 28.6 6.9   8 2.44 0.241 19.1, 39.6 -0.04
LP/J f 34.3 8.3   7 3.14 0.242 18.0, 44.5 0.38
LP/J m 50.3 7.04   8 2.49 0.14 36.9, 60.5 2.92
MOLF/EiJ f 39.5 6.05   7 2.29 0.153 32.9, 46.9 0.97
MOLF/EiJ m 44.6 5.17   9 1.72 0.116 37.1, 54.7 2.14
MRL/MpJ f 28.2 11.7   8 4.15 0.417 12.3, 43.3 -0.32
MRL/MpJ m 22.6 8.11   8 2.87 0.358 13.5, 38.1 -0.86
NON/ShiLtJ f 28.7 13.6   8 4.82 0.475 18.9, 60.3 -0.26
NON/ShiLtJ m 31.5 6.6   7 2.49 0.21 22.7, 38.5 0.36
NZO/HlLtJ f 35.3 7.73   7 2.92 0.219 25.4, 44.9 0.49
NZO/HlLtJ m 34.6 10.6   7 4.0 0.306 21.4, 50.7 0.78
NZW/LacJ f 39.7 33.7   8 11.9 0.848 14.8, 120.0 0.99
NZW/LacJ m 28.6 9.29   8 3.28 0.325 17.4, 46.6 -0.04
P/J f 27.2 18.1   8 6.38 0.664 8.38, 67.2 -0.43
P/J m 30.4 10.3   7 3.9 0.339 15.9, 42.4 0.21
PL/J f 35.3 12.2   7 4.62 0.346 21.8, 55.4 0.49
PL/J m 27.7 7.32   6 2.99 0.264 18.2, 37.4 -0.16
PWD/PhJ f 20.3 6.2   8 2.19 0.305 11.7, 30.6 -1.22
PWD/PhJ m 23.9 8.78   8 3.1 0.367 13.5, 38.1 -0.68
RIIIS/J f 19.5 8.38   8 2.96 0.43 11.7, 34.7 -1.31
RIIIS/J m 19.0 5.2   8 1.84 0.274 12.8, 27.0 -1.35
SJL/J f 27.7 13.8   8 4.89 0.5 18.9, 60.3 -0.38
SJL/J m 19.8 7.31   9 2.44 0.369 11.4, 34.9 -1.24
SM/J f 27.8 13.3   8 4.69 0.476 15.2, 58.8 -0.37
SM/J m 26.1 17.9   8 6.33 0.686 12.4, 67.4 -0.38
SWR/J f 30.0 4.96   7 1.88 0.165 23.7, 39.4 -0.11
SWR/J m 22.5 4.81   7 1.82 0.214 17.0, 28.3 -0.87
WSB/EiJ f 14.8 3.69   8 1.3 0.249 9.56, 21.5 -1.85
WSB/EiJ m 18.2 3.12   8 1.1 0.171 14.3, 22.9 -1.46


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 19.1 4.5734 28.0915 10.1085
129S1/SvImJ m 33.1625 4.5734 42.154 24.171
A/J f 39.3375 4.5734 48.329 30.346
A/J m 22.05 4.5734 31.0415 13.0585
BALB/cByJ f 28.3375 4.5734 37.329 19.346
BALB/cByJ m 30.9 4.5734 39.8915 21.9085
BTBR T+ Itpr3tf/J f 22.9125 4.5734 31.904 13.921
BTBR T+ Itpr3tf/J m 24.8286 4.8891 34.4409 15.2162
BUB/BnJ f 40.0667 5.2809 50.4492 29.6841
BUB/BnJ m 30.5889 4.3118 39.0662 22.1116
C3H/HeJ f 21.575 4.5734 30.5665 12.5835
C3H/HeJ m 22.525 4.5734 31.5165 13.5335
C57BL/10J f 34.0125 4.5734 43.004 25.021
C57BL/10J m 28.5857 4.8891 38.1981 18.9734
C57BL/6J f 27.1875 4.5734 36.179 18.196
C57BL/6J m 31.9875 4.5734 40.979 22.996
C57BLKS/J f 33.95 4.5734 42.9415 24.9585
C57BLKS/J m 39.3375 4.5734 48.329 30.346
C57BR/cdJ f 59.425 4.5734 68.4165 50.4335
C57BR/cdJ m 28.3375 4.5734 37.329 19.346
C57L/J f 40.1857 4.8891 49.7981 30.5734
C57L/J m 38.225 4.5734 47.2165 29.2335
CBA/J f 36.5 4.5734 45.4915 27.5085
CBA/J m 27.375 4.5734 36.3665 18.3835
DBA/2J f 35.2167 5.2809 45.5992 24.8341
DBA/2J m 24.7429 4.8891 34.3552 15.1305
FVB/NJ f 25.6875 4.5734 34.679 16.696
FVB/NJ m 23.0625 4.5734 32.054 14.071
KK/HlJ f 30.7375 4.5734 39.729 21.746
KK/HlJ m 28.625 4.5734 37.6165 19.6335
LP/J f 34.3286 4.8891 43.9409 24.7162
LP/J m 50.2625 4.5734 59.254 41.271
MOLF/EiJ f 39.4857 4.8891 49.0981 29.8734
MOLF/EiJ m 44.5667 4.3118 53.044 36.0894
MRL/MpJ f 28.175 4.5734 37.1665 19.1835
MRL/MpJ m 22.6375 4.5734 31.629 13.646
NON/ShiLtJ f 28.725 4.5734 37.7165 19.7335
NON/ShiLtJ m 31.4571 4.8891 41.0695 21.8448
NZO/HlLtJ f 35.2571 4.8891 44.8695 25.6448
NZO/HlLtJ m 34.5857 4.8891 44.1981 24.9734
NZW/LacJ f 39.7375 4.5734 48.729 30.746
NZW/LacJ m 28.6125 4.5734 37.604 19.621
P/J f 27.185 4.5734 36.1765 18.1935
P/J m 30.4143 4.8891 40.0266 20.8019
PL/J f 35.3143 4.8891 44.9266 25.7019
PL/J m 27.7167 5.2809 38.0992 17.3341
PWD/PhJ f 20.3375 4.5734 29.329 11.346
PWD/PhJ m 23.95 4.5734 32.9415 14.9585
RIIIS/J f 19.475 4.5734 28.4665 10.4835
RIIIS/J m 18.975 4.5734 27.9665 9.9835
SJL/J f 27.675 4.5734 36.6665 18.6835
SJL/J m 19.8333 4.3118 28.3106 11.356
SM/J f 27.825 4.5734 36.8165 18.8335
SM/J m 26.1125 4.5734 35.104 17.121
SWR/J f 30.0 4.8891 39.6124 20.3876
SWR/J m 22.4571 4.8891 32.0695 12.8448
WSB/EiJ f 14.845 4.5734 23.8365 5.8535
WSB/EiJ m 18.225 4.5734 27.2165 9.2335


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 26.1312 3.2339 32.4892 19.7733
A/J both 30.6937 3.2339 37.0517 24.3358
BALB/cByJ both 29.6187 3.2339 35.9767 23.2608
BTBR T+ Itpr3tf/J both 23.8705 3.3474 30.4517 17.2894
BUB/BnJ both 35.3278 3.4088 42.0297 28.6259
C3H/HeJ both 22.05 3.2339 28.408 15.692
C57BL/10J both 31.2991 3.3474 37.8802 24.718
C57BL/6J both 29.5875 3.2339 35.9455 23.2295
C57BLKS/J both 36.6437 3.2339 43.0017 30.2858
C57BR/cdJ both 43.8813 3.2339 50.2392 37.5233
C57L/J both 39.2054 3.3474 45.7865 32.6242
CBA/J both 31.9375 3.2339 38.2955 25.5795
DBA/2J both 29.9798 3.5983 37.0543 22.9053
FVB/NJ both 24.375 3.2339 30.733 18.017
KK/HlJ both 29.6813 3.2339 36.0392 23.3233
LP/J both 42.2955 3.3474 48.8767 35.7144
MOLF/EiJ both 42.0262 3.2594 48.4344 35.618
MRL/MpJ both 25.4062 3.2339 31.7642 19.0483
NON/ShiLtJ both 30.0911 3.3474 36.6722 23.5099
NZO/HlLtJ both 34.9214 3.4571 41.7184 28.1245
NZW/LacJ both 34.175 3.2339 40.533 27.817
P/J both 28.7996 3.3474 35.3808 22.2185
PL/J both 31.5155 3.5983 38.59 24.441
PWD/PhJ both 22.1437 3.2339 28.5017 15.7858
RIIIS/J both 19.225 3.2339 25.583 12.867
SJL/J both 23.7542 3.1427 29.933 17.5753
SM/J both 26.9687 3.2339 33.3267 20.6108
SWR/J both 26.2286 3.4571 33.0255 19.4316
WSB/EiJ both 16.535 3.2339 22.893 10.177




  GWAS USING LINEAR MIXED MODELS

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