Project measure / variable:   Petkova1   WBC_M06

ID, description, units MPD:24201   WBC_M06   white blood cell count (WBC; per volume x 103)   [n/µL]  at age 6mo  
Data set, strains Petkova1   inbred   32 strains     sex: both     age: 26wks
Procedure immune cell quantification
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  STRAIN COMPARISON PLOT
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Petkova1 - white blood cell count (WBC; per volume x 103) at age 6mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested32 strains31 strains
Mean of the strain means21.1   n/µL 20.7   n/µL
Median of the strain means20.8   n/µL 20.6   n/µL
SD of the strain means± 6.91 ± 5.80
Coefficient of variation (CV)0.328 0.280
Min–max range of strain means9.21   –   36.5   n/µL 11.0   –   36.5   n/µL
Mean sample size per strain7.9   mice 7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 4.2975 4.2975 0.1355 0.7129
strain 30 16053.9016 535.1301 16.8769 < 0.0001
sex:strain 30 3775.6385 125.8546 3.9692 < 0.0001
Residuals 433 13729.5033 31.7079


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 18.5 7.69   8 2.72 0.416 11.1, 32.1 -0.37
129S1/SvImJ m 18.0 2.91   8 1.03 0.162 15.0, 24.2 -0.47
A/J f 12.8 2.1   7 0.794 0.164 10.3, 15.5 -1.2
A/J m 11.0 2.79   8 0.987 0.255 7.56, 14.7 -1.68
AKR/J f 22.0 9.69   8 3.43 0.44 8.16, 37.5 0.14
AKR/J m 11.9 3.58   8 1.26 0.301 7.4, 18.5 -1.52
BALB/cByJ f 25.8 3.58   8 1.26 0.139 21.0, 31.2 0.69
BALB/cByJ m 22.4 3.33   8 1.18 0.149 18.2, 28.5 0.29
BTBR T+ Itpr3tf/J f 18.2 2.32   8 0.82 0.127 13.4, 21.7 -0.41
BTBR T+ Itpr3tf/J m 21.9 5.26   8 1.86 0.239 15.6, 29.9 0.2
BUB/BnJ f 21.3 3.91   8 1.38 0.183 14.5, 27.7 0.03
BUB/BnJ m 25.8 3.69   8 1.3 0.143 18.2, 30.5 0.87
C3H/HeJ f 9.22 1.1   8 0.388 0.119 7.17, 10.6 -1.72
C3H/HeJ m 14.8 3.04   8 1.07 0.205 9.96, 19.2 -1.02
C57BL/10J f 18.5 4.97   8 1.76 0.268 12.3, 24.8 -0.37
C57BL/10J m 19.1 3.68   8 1.3 0.193 14.5, 24.9 -0.28
C57BL/6J f 28.4 8.56   8 3.03 0.301 17.9, 40.9 1.06
C57BL/6J m 24.3 3.98   8 1.41 0.164 18.1, 29.8 0.61
C57BLKS/J f 36.5 10.8   7 4.09 0.296 24.3, 55.4 2.24
C57BLKS/J m 20.2 12.1   8 4.29 0.6 7.09, 46.1 -0.09
C57BR/cdJ f 20.3 5.09   8 1.8 0.251 12.9, 30.5 -0.11
C57BR/cdJ m 26.9 3.57   8 1.26 0.133 21.9, 31.7 1.06
C57L/J f 22.3 11.0   8 3.88 0.493 13.5, 47.1 0.18
C57L/J m 27.1 6.73   8 2.38 0.248 19.3, 39.3 1.1
CAST/EiJ f 23.4 5.44   6 2.22 0.232 14.9, 30.7 0.34
CBA/J f 9.25 1.85   8 0.655 0.2 6.81, 11.4 -1.71
CBA/J m 12.1 2.23   8 0.79 0.185 8.82, 15.0 -1.49
DBA/2J f 22.1 4.63   8 1.64 0.21 16.2, 31.0 0.15
DBA/2J m 21.7 2.68   8 0.946 0.123 17.0, 24.5 0.17
FVB/NJ f 20.7 6.98   8 2.47 0.338 12.0, 35.9 -0.05
FVB/NJ m 16.0 7.96   8 2.81 0.498 8.96, 35.0 -0.82
KK/HlJ f 20.9 2.83   8 1.0 0.136 16.7, 25.4 -0.02
KK/HlJ m 15.1 4.05   8 1.43 0.268 9.03, 20.9 -0.97
LP/J f 30.9 5.98   8 2.12 0.194 25.0, 39.5 1.42
LP/J m 24.1 6.97   8 2.47 0.29 18.2, 40.7 0.58
MOLF/EiJ f 29.1 7.21   7 2.73 0.248 19.2, 42.4 1.16
MOLF/EiJ m 36.5 7.46   8 2.64 0.205 23.7, 49.5 2.72
MRL/MpJ f 9.21 2.9   8 1.03 0.316 6.29, 13.5 -1.72
MRL/MpJ m 14.8 3.07   8 1.08 0.207 10.3, 18.6 -1.02
NOD.B10Sn-H2b/J f 18.4 2.84   9 0.947 0.154 14.4, 23.6 -0.39
NOD.B10Sn-H2b/J m 20.6 3.83   7 1.45 0.186 15.7, 25.9 -0.02
NON/ShiLtJ f 14.9 4.23   8 1.49 0.284 9.88, 22.0 -0.89
NON/ShiLtJ m 18.5 3.38   8 1.19 0.182 14.7, 23.5 -0.39
NZO/HlLtJ f 18.4 1.81   8 0.638 0.0984 14.6, 20.9 -0.39
NZO/HlLtJ m 22.4 3.45   8 1.22 0.154 16.5, 26.6 0.29
NZW/LacJ f 30.9 6.4   8 2.26 0.207 23.2, 41.0 1.42
NZW/LacJ m 27.2 4.18   8 1.48 0.154 21.8, 34.4 1.11
P/J f 17.6 6.64   8 2.35 0.378 9.8, 31.9 -0.5
P/J m 20.4 2.09   8 0.74 0.103 17.7, 24.6 -0.06
PL/J f 33.8 12.8   7 4.84 0.379 23.5, 60.6 1.84
PL/J m 27.9 6.89   7 2.6 0.247 14.3, 35.7 1.23
PWD/PhJ f 20.8 7.41   8 2.62 0.357 15.3, 37.9 -0.04
PWD/PhJ m 26.4 5.24   8 1.85 0.198 19.4, 34.6 0.98
RIIIS/J f 18.6 5.35   8 1.89 0.288 13.1, 28.9 -0.36
RIIIS/J m 22.2 4.74   8 1.68 0.214 16.8, 30.8 0.25
SJL/J f 26.4 6.11   8 2.16 0.232 16.1, 37.0 0.77
SJL/J m 15.6 2.73   6 1.11 0.175 11.0, 19.2 -0.88
SM/J f 11.9 2.78   16 0.695 0.234 7.78, 16.6 -1.33
SM/J m 13.1 2.0   8 0.706 0.152 11.0, 16.7 -1.32
SWR/J f 26.0 12.0   8 4.26 0.462 13.8, 49.8 0.71
SWR/J m 25.6 3.4   8 1.2 0.132 20.6, 30.4 0.84
WSB/EiJ f 17.0 3.51   8 1.24 0.206 9.54, 20.3 -0.59
WSB/EiJ m 19.2 2.34   6 0.953 0.122 16.7, 22.2 -0.26


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 18.4875 1.9908 22.4004 14.5746
129S1/SvImJ m 17.975 1.9908 21.8879 14.0621
A/J f 12.8286 2.1283 17.0117 8.6455
A/J m 10.9537 1.9908 14.8667 7.0408
AKR/J f 22.02 1.9908 25.9329 18.1071
AKR/J m 11.8738 1.9908 15.7867 7.9608
BALB/cByJ f 25.7875 1.9908 29.7004 21.8746
BALB/cByJ m 22.3875 1.9908 26.3004 18.4746
BTBR T+ Itpr3tf/J f 18.1875 1.9908 22.1004 14.2746
BTBR T+ Itpr3tf/J m 21.95 1.9908 25.8629 18.0371
BUB/BnJ f 21.325 1.9908 25.2379 17.4121
BUB/BnJ m 25.825 1.9908 29.7379 21.9121
C3H/HeJ f 9.2163 1.9908 13.1292 5.3033
C3H/HeJ m 14.8325 1.9908 18.7454 10.9196
C57BL/10J f 18.5375 1.9908 22.4504 14.6246
C57BL/10J m 19.0625 1.9908 22.9754 15.1496
C57BL/6J f 28.4125 1.9908 32.3254 24.4996
C57BL/6J m 24.275 1.9908 28.1879 20.3621
C57BLKS/J f 36.4857 2.1283 40.6688 32.3026
C57BLKS/J m 20.2038 1.9908 24.1167 16.2908
C57BR/cdJ f 20.3125 1.9908 24.2254 16.3996
C57BR/cdJ m 26.8875 1.9908 30.8004 22.9746
C57L/J f 22.2875 1.9908 26.2004 18.3746
C57L/J m 27.125 1.9908 31.0379 23.2121
CBA/J f 9.2537 1.9908 13.1667 5.3408
CBA/J m 12.0775 1.9908 15.9904 8.1646
DBA/2J f 22.0625 1.9908 25.9754 18.1496
DBA/2J m 21.725 1.9908 25.6379 17.8121
FVB/NJ f 20.675 1.9908 24.5879 16.7621
FVB/NJ m 15.97 1.9908 19.8829 12.0571
KK/HlJ f 20.85 1.9908 24.7629 16.9371
KK/HlJ m 15.1037 1.9908 19.0167 11.1908
LP/J f 30.8625 1.9908 34.7754 26.9496
LP/J m 24.075 1.9908 27.9879 20.1621
MOLF/EiJ f 29.0857 2.1283 33.2688 24.9026
MOLF/EiJ m 36.4625 1.9908 40.3754 32.5496
MRL/MpJ f 9.205 1.9908 13.1179 5.2921
MRL/MpJ m 14.85 1.9908 18.7629 10.9371
NOD.B10Sn-H2b/J f 18.4444 1.877 22.1336 14.7553
NOD.B10Sn-H2b/J m 20.6286 2.1283 24.8117 16.4455
NON/ShiLtJ f 14.8975 1.9908 18.8104 10.9846
NON/ShiLtJ m 18.525 1.9908 22.4379 14.6121
NZO/HlLtJ f 18.35 1.9908 22.2629 14.4371
NZO/HlLtJ m 22.4125 1.9908 26.3254 18.4996
NZW/LacJ f 30.925 1.9908 34.8379 27.0121
NZW/LacJ m 27.1875 1.9908 31.1004 23.2746
P/J f 17.5875 1.9908 21.5004 13.6746
P/J m 20.4 1.9908 24.3129 16.4871
PL/J f 33.7857 2.1283 37.9688 29.6026
PL/J m 27.8571 2.1283 32.0402 23.674
PWD/PhJ f 20.75 1.9908 24.6629 16.8371
PWD/PhJ m 26.4 1.9908 30.3129 22.4871
RIIIS/J f 18.5625 1.9908 22.4754 14.6496
RIIIS/J m 22.1875 1.9908 26.1004 18.2746
SJL/J f 26.3625 1.9908 30.2754 22.4496
SJL/J m 15.6167 2.2988 20.1349 11.0984
SM/J f 11.8906 1.4077 14.6575 9.1238
SM/J m 13.1125 1.9908 17.0254 9.1996
SWR/J f 26.0375 1.9908 29.9504 22.1246
SWR/J m 25.65 1.9908 29.5629 21.7371
WSB/EiJ f 17.0175 1.9908 20.9304 13.1046
WSB/EiJ m 19.1833 2.2988 23.7016 14.6651


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 18.2312 1.4077 20.9981 15.4644
A/J both 11.8912 1.4572 14.7551 9.0272
AKR/J both 16.9469 1.4077 19.7137 14.18
BALB/cByJ both 24.0875 1.4077 26.8544 21.3206
BTBR T+ Itpr3tf/J both 20.0687 1.4077 22.8356 17.3019
BUB/BnJ both 23.575 1.4077 26.3419 20.8081
C3H/HeJ both 12.0244 1.4077 14.7912 9.2575
C57BL/10J both 18.8 1.4077 21.5669 16.0331
C57BL/6J both 26.3437 1.4077 29.1106 23.5769
C57BLKS/J both 28.3447 1.4572 31.2087 25.4808
C57BR/cdJ both 23.6 1.4077 26.3669 20.8331
C57L/J both 24.7062 1.4077 27.4731 21.9394
CBA/J both 10.6656 1.4077 13.4325 7.8988
DBA/2J both 21.8937 1.4077 24.6606 19.1269
FVB/NJ both 18.3225 1.4077 21.0894 15.5556
KK/HlJ both 17.9769 1.4077 20.7437 15.21
LP/J both 27.4688 1.4077 30.2356 24.7019
MOLF/EiJ both 32.7741 1.4572 35.6381 29.9101
MRL/MpJ both 12.0275 1.4077 14.7944 9.2606
NOD.B10Sn-H2b/J both 19.5365 1.4189 22.3252 16.7478
NON/ShiLtJ both 16.7112 1.4077 19.4781 13.9444
NZO/HlLtJ both 20.3812 1.4077 23.1481 17.6144
NZW/LacJ both 29.0562 1.4077 31.8231 26.2894
P/J both 18.9937 1.4077 21.7606 16.2269
PL/J both 30.8214 1.5049 33.7793 27.8635
PWD/PhJ both 23.575 1.4077 26.3419 20.8081
RIIIS/J both 20.375 1.4077 23.1419 17.6081
SJL/J both 20.9896 1.5205 23.9781 18.001
SM/J both 12.5016 1.2191 14.8977 10.1054
SWR/J both 25.8437 1.4077 28.6106 23.0769
WSB/EiJ both 18.1004 1.5205 21.089 15.1119




  GWAS USING LINEAR MIXED MODELS