Project measure / variable:   Jaxpheno5   bw15

ID, description, units MPD:23013   bw15   body weight   [g]  at age 15 wks  
Data set, strains Jaxpheno5   inbred   10 strains     sex: both     age: 15wks
Procedure body weight
Ontology mappings

  STRAIN COMPARISON PLOT
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Jaxpheno5 - body weight at age 15 wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means23.9   g 30.0   g
Median of the strain means24.0   g 29.4   g
SD of the strain means± 1.27 ± 2.15
Coefficient of variation (CV)0.0534 0.0717
Min–max range of strain means21.8   –   25.6   g 26.9   –   33.8   g
Mean sample size per strain84.4   mice 86.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 7612.8407 7612.8407 1474.6743 < 0.0001
strain 6 819.9972 136.6662 26.4734 < 0.0001
sex:strain 6 315.0419 52.507 10.1711 < 0.0001
Residuals 694 3582.6972 5.1624


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 23.1 1.9   157 0.152 0.082 -0.59
A/J m 26.9 2.4   146 0.199 0.089 -1.45
B6D2F1/J f 25.6 3.13   31 0.563 0.123 20.8, 33.7 1.37
B6D2F1/J m 33.8 2.28   28 0.431 0.0676 29.5, 38.5 1.76
B6.SJL-Ptprca Pepcb/BoyJ f 24.3 2.3   95 0.236 0.095 0.35
B6.SJL-Ptprca Pepcb/BoyJ m 31.1 2.6   111 0.247 0.084 0.5
BALB/cByJ f 24.8 2.09   58 0.275 0.0845 20.4, 29.6 0.75
BALB/cByJ m 29.2 1.64   59 0.213 0.0562 25.5, 34.3 -0.38
C57BL/6J f 22.0 2.12   107 0.205 0.0964 18.1, 29.1 -1.45
C57BL/6J m 29.7 1.86   104 0.182 0.0626 24.7, 35.3 -0.15
CBA/J f 24.6 3.25   55 0.439 0.132 16.7, 31.1 0.59
CBA/J m 30.9 2.29   56 0.306 0.0741 26.0, 36.0 0.41
DBA/2J f 23.6 2.03   30 0.371 0.0862 18.0, 26.5 -0.2
DBA/2J m 28.3 2.4   30 0.439 0.0849 23.5, 33.5 -0.8
NOD.CB17-Prkdcscid/J f 21.8 1.1   79 0.124 0.05 -1.61
NOD.CB17-Prkdcscid/J m 29.0 2.1   75 0.242 0.072 -0.47
NOD.Cg-Prkdcscid Il2rgtm1Wjl/SzJ f 25.1 1.7   196 0.121 0.068 0.98
NOD.Cg-Prkdcscid Il2rgtm1Wjl/SzJ m 32.9 2.4   200 0.17 0.073 1.34
NOD/ShiLtJ f 23.6 1.7   93 0.176 0.072 -0.2
NOD/ShiLtJ m 28.4 2.0   113 0.188 0.07 -0.75


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6D2F1/J f 25.5870967742 0.408079208 26.3883146394 24.785878909
B6D2F1/J m 33.7642857143 0.4293844365 34.6073340118 32.9212374168
BALB/cByJ f 24.7620689655 0.2983398849 25.3478259484 24.1763119826
BALB/cByJ m 29.1559322034 0.2958007758 29.7367039298 28.575160477
C57BL/6J f 21.9953271028 0.2196511219 22.4265875039 21.5640667017
C57BL/6J m 29.7067307692 0.2227966441 30.1441670513 29.2692944871
CBA/J f 24.6454545455 0.3063684009 25.2469746214 24.0439344695
CBA/J m 30.9125 0.3036206468 31.508625168 30.316374832
DBA/2J f 23.6066666667 0.4148247759 24.4211286996 22.7922046337
DBA/2J m 28.29 0.4148247759 29.104462033 27.475537967
NOD.CB17-Prkdcscid/J f 23.46 0.5080545168 24.4575081978 22.4624918022
NOD.CB17-Prkdcscid/J m 29.96 0.5080545168 30.9575081978 28.9624918022
NOD/ShiLtJ f 23.4369230769 0.2818179402 23.99024107 22.8836050839
NOD/ShiLtJ m 30.7288888889 0.3387030112 31.3938943541 30.0638834237


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6D2F1/J both 29.6756912442 0.2961839101 30.2572152118 29.0941672767
BALB/cByJ both 26.9590005845 0.2100623633 27.3714345311 26.5465666379
C57BL/6J both 25.851028936 0.156432861 26.1581673553 25.5438905167
CBA/J both 27.7789772727 0.2156658841 28.2024131054 27.35554144
DBA/2J both 25.9483333333 0.293325412 26.5242449599 25.3724217068
NOD.CB17-Prkdcscid/J both 26.71 0.359248794 27.415344811 26.004655189
NOD/ShiLtJ both 27.0829059829 0.220307218 27.5154545554 26.6503574104




  GWAS USING LINEAR MIXED MODELS