Project measure / variable:   Jaxpheno5   bw07

ID, description, units MPD:23005   bw07   body weight   [g]  at age 7 wks  
Data set, strains Jaxpheno5   inbred   10 strains     sex: both     age: 7wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Jaxpheno5 - body weight at age 7 wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means19.1   g 23.4   g
Median of the strain means18.9   g 23.1   g
SD of the strain means± 1.31 ± 1.85
Coefficient of variation (CV)0.0689 0.0792
Min–max range of strain means17.4   –   22.0   g 21.0   –   27.4   g
Mean sample size per strain91.6   mice 95.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 3523.3694 3523.3694 1722.3317 < 0.0001
strain 6 532.1206 88.6868 43.3528 < 0.0001
sex:strain 6 86.3266 14.3878 7.0332 < 0.0001
Residuals 721 1474.9477 2.0457


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 18.6 1.9   158 0.151 0.102 -0.35
A/J m 21.6 2.1   177 0.158 0.097 -0.98
B6D2F1/J f 19.0 1.37   31 0.246 0.0719 15.5, 21.9 -0.05
B6D2F1/J m 24.0 1.35   28 0.255 0.0564 21.6, 27.4 0.32
B6.SJL-Ptprca Pepcb/BoyJ f 19.0 1.3   118 0.12 0.068 -0.05
B6.SJL-Ptprca Pepcb/BoyJ m 23.7 1.6   117 0.148 0.068 0.16
BALB/cByJ f 18.8 1.26   60 0.163 0.0671 16.4, 21.6 -0.2
BALB/cByJ m 22.3 1.34   59 0.174 0.0599 19.2, 25.5 -0.6
C57BL/6J f 17.5 1.32   110 0.126 0.0752 14.1, 21.1 -1.19
C57BL/6J m 22.4 1.4   105 0.137 0.0626 18.9, 28.0 -0.54
CBA/J f 18.7 1.41   56 0.188 0.0756 15.5, 21.3 -0.27
CBA/J m 22.6 1.48   76 0.17 0.0656 18.9, 27.1 -0.44
DBA/2J f 17.4 1.41   30 0.257 0.0808 13.6, 19.8 -1.26
DBA/2J m 21.0 1.86   30 0.34 0.0889 15.7, 24.8 -1.3
NOD.CB17-Prkdcscid/J f 19.5 1.3   80 0.145 0.067 0.34
NOD.CB17-Prkdcscid/J m 24.5 1.8   79 0.203 0.073 0.59
NOD.Cg-Prkdcscid Il2rgtm1Wjl/SzJ f 22.0 1.5   197 0.107 0.068 2.24
NOD.Cg-Prkdcscid Il2rgtm1Wjl/SzJ m 27.4 1.8   200 0.127 0.066 2.15
NOD/ShiLtJ f 20.1 1.5   120 0.137 0.075 0.79
NOD/ShiLtJ m 24.6 1.8   119 0.165 0.073 0.64


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6D2F1/J f 19.0161290323 0.2568856463 19.520462262 18.5117958025
B6D2F1/J m 23.975 0.2702972764 24.5056637422 23.4443362578
BALB/cByJ f 18.8166666667 0.1846481922 19.179179016 18.4541543173
BALB/cByJ m 22.3271186441 0.1862064324 22.6926902236 21.9615470646
C57BL/6J f 17.5463636364 0.1363717277 17.8140967498 17.2786305229
C57BL/6J m 22.4161904762 0.1395809133 22.6902240543 22.142156898
CBA/J f 18.6625 0.1911290371 19.0377359307 18.2872640693
CBA/J m 22.5960526316 0.1640642242 22.9181533065 22.2739519566
DBA/2J f 17.45 0.2611319777 17.962669881 16.937330119
DBA/2J m 20.9666666667 0.2611319777 21.4793365476 20.4539967857
NOD.CB17-Prkdcscid/J f 19.475 0.3198200504 20.1028898074 18.8471101926
NOD.CB17-Prkdcscid/J m 24.375 0.3198200504 25.0028898074 23.7471101926
NOD/ShiLtJ f 19.4046153846 0.1774042447 19.752905984 19.0563247852
NOD/ShiLtJ m 24.7866666667 0.213213367 25.2052598716 24.3680734617


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6D2F1/J both 21.4955645161 0.1864476152 21.8616096001 21.1295194322
BALB/cByJ both 20.5718926554 0.1311180674 20.8293114693 20.3144738414
C57BL/6J both 19.9812770563 0.0975705892 20.1728334592 19.7897206534
CBA/J both 20.6292763158 0.1259438153 20.8765367294 20.3820159022
DBA/2J both 19.2083333333 0.1846481922 19.5708456827 18.845820984
NOD.CB17-Prkdcscid/J both 21.925 0.2261469264 22.3689851407 21.4810148593
NOD/ShiLtJ both 22.0956410256 0.1386832776 22.3679123117 21.8233697396




  GWAS USING LINEAR MIXED MODELS