Project measure / variable:   Jaxpheno2   pct_heart8

ID, description, units MPD:22712   pct_heart8   heart weight as percentage of body weight   [%]  at age 8wks  
Data set, strains Jaxpheno2   inbred   11 strains     sex: both     age: 8wks
Procedure organ weights
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  STRAIN COMPARISON PLOT
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Jaxpheno2 - heart weight as percentage of body weight at age 8wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested11 strains11 strains
Mean of the strain means0.572   % 0.583   %
Median of the strain means0.559   % 0.554   %
SD of the strain means± 0.112 ± 0.111
Coefficient of variation (CV)0.196 0.190
Min–max range of strain means0.466   –   0.840   % 0.452   –   0.853   %
Mean sample size per strain7.9   mice 8.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0007 0.0007 0.003 0.9566
strain 10 1.4427 0.1443 0.6481 0.7709
sex:strain 10 1.0634 0.1063 0.4777 0.9028
Residuals 169 37.6232 0.2226


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.129P2-Apoetm1Unc/J f 0.486 0.0288   5 0.0129 0.0593 0.46, 0.53 -0.77
B6.129P2-Apoetm1Unc/J m 0.554 0.0666   5 0.0298 0.12 0.49, 0.65 -0.26
B6D2F1/J f 0.618 0.123   6 0.0502 0.199 0.45, 0.82 0.41
B6D2F1/J m 0.68 0.0539   5 0.0241 0.0792 0.61, 0.73 0.88
BALB/cByJ f 0.559 0.05   10 0.0158 0.0894 0.5, 0.67 -0.12
BALB/cByJ m 0.53 0.0435   10 0.0137 0.082 0.48, 0.59 -0.48
BALB/cJ f 0.84 1.26   10 0.398 1.5 0.41, 4.42 2.38
BALB/cJ m 0.479 0.0233   10 0.00737 0.0487 0.45, 0.51 -0.94
C3H/HeJ f 0.496 0.107   5 0.0478 0.216 0.4, 0.68 -0.68
C3H/HeJ m 0.452 0.0335   5 0.015 0.074 0.42, 0.5 -1.18
C57BL/6J f 0.609 0.109   15 0.0281 0.179 0.46, 0.86 0.33
C57BL/6J m 0.623 0.0902   15 0.0233 0.145 0.48, 0.74 0.36
CBA/J f 0.488 0.0494   10 0.0156 0.101 0.43, 0.59 -0.75
CBA/J m 0.509 0.0867   15 0.0224 0.17 0.4, 0.68 -0.67
DBA/2J f 0.643 0.071   10 0.0225 0.11 0.55, 0.76 0.63
DBA/2J m 0.853 1.26   15 0.326 1.48 0.5, 5.42 2.44
FVB/NJ f 0.466 0.0365   5 0.0163 0.0783 0.44, 0.53 -0.95
FVB/NJ m 0.6 0.0187   5 0.00837 0.0312 0.58, 0.62 0.15
NOD.CB17-Prkdcscid/J f 0.466 0.0462   5 0.0206 0.099 0.43, 0.54 -0.95
NOD.CB17-Prkdcscid/J m 0.586 0.0573   5 0.0256 0.0977 0.51, 0.65 0.03
NOD/ShiLtJ f 0.626 0.149   10 0.0472 0.239 0.48, 0.87 0.48
NOD/ShiLtJ m 0.546 0.12   10 0.0381 0.22 0.42, 0.75 -0.33


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J f 0.486 0.211 0.9026 0.0694
B6.129P2-Apoetm1Unc/J m 0.554 0.211 0.9706 0.1374
B6D2F1/J f 0.6183 0.1926 0.9986 0.2381
B6D2F1/J m 0.68 0.211 1.0966 0.2634
BALB/cByJ f 0.559 0.1492 0.8535 0.2645
BALB/cByJ m 0.53 0.1492 0.8245 0.2355
BALB/cJ f 0.84 0.1492 1.1345 0.5455
BALB/cJ m 0.479 0.1492 0.7735 0.1845
C3H/HeJ f 0.496 0.211 0.9126 0.0794
C3H/HeJ m 0.452 0.211 0.8686 0.0354
C57BL/6J f 0.6087 0.1218 0.8492 0.3682
C57BL/6J m 0.6227 0.1218 0.8632 0.3822
CBA/J f 0.488 0.1492 0.7825 0.1935
CBA/J m 0.5093 0.1218 0.7498 0.2688
DBA/2J f 0.643 0.1492 0.9375 0.3485
DBA/2J m 0.8527 0.1218 1.0932 0.6122
FVB/NJ f 0.466 0.211 0.8826 0.0494
FVB/NJ m 0.6 0.211 1.0166 0.1834
NOD.CB17-Prkdcscid/J f 0.466 0.211 0.8826 0.0494
NOD.CB17-Prkdcscid/J m 0.586 0.211 1.0026 0.1694
NOD/ShiLtJ f 0.626 0.1492 0.9205 0.3315
NOD/ShiLtJ m 0.546 0.1492 0.8405 0.2515


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J both 0.52 0.1492 0.8145 0.2255
B6D2F1/J both 0.6492 0.1429 0.9312 0.3672
BALB/cByJ both 0.5445 0.1055 0.7528 0.3362
BALB/cJ both 0.6595 0.1055 0.8678 0.4512
C3H/HeJ both 0.474 0.1492 0.7685 0.1795
C57BL/6J both 0.6157 0.0861 0.7857 0.4456
CBA/J both 0.4987 0.0963 0.6888 0.3085
DBA/2J both 0.7478 0.0963 0.938 0.5577
FVB/NJ both 0.533 0.1492 0.8275 0.2385
NOD.CB17-Prkdcscid/J both 0.526 0.1492 0.8205 0.2315
NOD/ShiLtJ both 0.586 0.1055 0.7943 0.3777




  GWAS USING LINEAR MIXED MODELS