Project measure / variable:   Brown2   fall_ave_d4

ID, description, units MPD:22564   fall_ave_d4   latency to fall from accelerating rotarod (8 rpm/min)   [s]  day4  
Data set, strains Brown2   inbred   12 strains     sex: both     age: 10-18wks
Procedure rotarod
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  STRAIN COMPARISON PLOT
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Brown2 - latency to fall from accelerating rotarod (8 rpm/min) day4



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested12 strains12 strains
Mean of the strain means159   s 131   s
Median of the strain means130   s 111   s
SD of the strain means± 76.5 ± 57.2
Coefficient of variation (CV)0.480 0.438
Min–max range of strain means75.6   –   304   s 74.8   –   240   s
Mean sample size per strain12.1   mice 11.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 50429.5896 50429.5896 26.1971 < 0.0001
strain 11 1160294.194 105481.2904 54.7953 < 0.0001
sex:strain 11 91503.7661 8318.5242 4.3213 < 0.0001
Residuals 272 523601.6654 1925.0061


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 242.0 78.3   12 22.6 0.324 105.0, 358.0 1.08
129S1/SvImJ m 133.0 28.7   12 8.29 0.215 81.0, 171.0 0.04
A/J f 75.6 22.1   12 6.37 0.292 50.1, 110.0 -1.09
A/J m 74.8 31.1   18 7.34 0.416 36.1, 143.0 -0.98
AKR/J f 233.0 45.6   12 13.2 0.196 170.0, 306.0 0.96
AKR/J m 223.0 68.0   12 19.6 0.304 78.7, 324.0 1.61
BALB/cByJ f 91.3 20.7   21 4.53 0.227 57.8, 131.0 -0.89
BALB/cByJ m 97.9 26.2   12 7.56 0.267 53.7, 145.0 -0.57
BALB/cJ f 84.6 32.3   14 8.63 0.382 29.0, 135.0 -0.98
BALB/cJ m 79.4 37.0   10 11.7 0.465 28.8, 143.0 -0.9
C3H/HeJ f 104.0 26.1   11 7.86 0.251 73.2, 146.0 -0.72
C3H/HeJ m 122.0 67.5   9 22.5 0.551 47.5, 233.0 -0.15
C57BL/6J f 237.0 48.4   12 14.0 0.204 152.0, 329.0 1.02
C57BL/6J m 196.0 33.5   12 9.68 0.171 134.0, 247.0 1.14
DBA/2J f 112.0 32.2   12 9.3 0.287 60.0, 168.0 -0.62
DBA/2J m 99.3 28.7   12 8.29 0.289 64.2, 157.0 -0.55
FVB/NJ f 111.0 38.8   12 11.2 0.35 41.6, 177.0 -0.63
FVB/NJ m 84.6 16.5   12 4.75 0.195 55.9, 105.0 -0.81
MOLF/EiJ f 304.0 69.1   12 19.9 0.227 142.0, 360.0 1.89
MOLF/EiJ m 240.0 63.3   11 19.1 0.264 132.0, 323.0 1.91
SJL/J f 169.0 24.5   12 7.07 0.145 137.0, 208.0 0.13
SJL/J m 95.6 32.6   12 9.42 0.341 43.8, 163.0 -0.61
SM/J f 148.0 66.2   10 20.9 0.448 56.2, 238.0 -0.15
SM/J m 123.0 58.5   12 16.9 0.475 66.8, 257.0 -0.13


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 241.6667 12.6656 266.6017 216.7316
129S1/SvImJ m 133.4167 12.6656 158.3517 108.4816
A/J f 75.6083 12.6656 100.5434 50.6733
A/J m 74.7778 10.3414 95.1372 54.4184
AKR/J f 232.8333 12.6656 257.7684 207.8983
AKR/J m 223.475 12.6656 248.41 198.54
BALB/cByJ f 91.2524 9.5743 110.1015 72.4033
BALB/cByJ m 97.9167 12.6656 122.8517 72.9816
BALB/cJ f 84.6143 11.7261 107.6997 61.5289
BALB/cJ m 79.42 13.8745 106.735 52.105
C3H/HeJ f 103.7455 13.2288 129.7893 77.7016
C3H/HeJ m 122.4333 14.625 151.2258 93.6408
C57BL/6J f 236.8333 12.6656 261.7684 211.8983
C57BL/6J m 195.6667 12.6656 220.6017 170.7316
DBA/2J f 112.075 12.6656 137.01 87.14
DBA/2J m 99.3417 12.6656 124.2767 74.4066
FVB/NJ f 110.8917 12.6656 135.8267 85.9566
FVB/NJ m 84.5833 12.6656 109.5184 59.6483
MOLF/EiJ f 304.4167 12.6656 329.3517 279.4816
MOLF/EiJ m 239.8182 13.2288 265.862 213.7744
SJL/J f 168.8333 12.6656 193.7684 143.8983
SJL/J m 95.6333 12.6656 120.5684 70.6983
SM/J f 147.78 13.8745 175.095 120.465
SM/J m 123.25 12.6656 148.185 98.315


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 187.5417 8.9559 205.1734 169.9099
A/J both 75.1931 8.1756 91.2886 59.0976
AKR/J both 228.1542 8.9559 245.7859 210.5224
BALB/cByJ both 94.5845 7.9386 110.2134 78.9557
BALB/cJ both 82.0171 9.083 99.899 64.1353
C3H/HeJ both 113.0894 9.8601 132.5013 93.6775
C57BL/6J both 216.25 8.9559 233.8817 198.6183
DBA/2J both 105.7083 8.9559 123.3401 88.0766
FVB/NJ both 97.7375 8.9559 115.3692 80.1058
MOLF/EiJ both 272.1174 9.1572 290.1454 254.0894
SJL/J both 132.2333 8.9559 149.8651 114.6016
SM/J both 135.515 9.3931 154.0073 117.0227




  GWAS USING LINEAR MIXED MODELS