Project measure / variable:   Jaxpheno1   tissue_mass8

ID, description, units MPD:22410   tissue_mass8   total body tissue mass, head excluded   [g]  at age 8wks  
Data set, strains Jaxpheno1   inbred   11 strains     sex: both     age: 8wks
Procedure DXA
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  STRAIN COMPARISON PLOT
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Jaxpheno1 - total body tissue mass, head excluded at age 8wks

NOD/ShiLtJB6D2F1/JCBA/JNOD.CB17-Prkdc<scid>/JFVB/NJBALB/cByJC3H/HeJBALB/cJB6.129P2-Apoe<tm1Unc>/JDBA/2JC57BL/6J g 1618202224262830femalemale


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested11 strains11 strains
Mean of the strain means19.6   g 24.0   g
Median of the strain means19.6   g 23.6   g
SD of the strain means± 1.27 ± 1.34
Coefficient of variation (CV)0.0645 0.0559
Min–max range of strain means17.5   –   21.2   g 21.9   –   25.8   g
Mean sample size per strain7.8   mice 8.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 882.3888 882.3888 264.4942 < 0.0001
strain 10 261.2064 26.1206 7.8296 < 0.0001
sex:strain 10 74.4569 7.4457 2.2318 0.018
Residuals 173 577.1517 3.3361


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 22 (22)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
B6.129P2-Apoetm1Unc/J f 18.9 1.37   5 0.611 0.0723 17.1, 20.1 -0.56
B6.129P2-Apoetm1Unc/J m 23.4 1.54   5 0.689 0.0659 21.7, 25.9 -0.43
B6D2F1/J f 20.8 1.02   5 0.454 0.0488 19.9, 22.2 0.94
B6D2F1/J m 24.5 1.25   5 0.557 0.0508 23.3, 26.6 0.39
BALB/cByJ f 20.0 1.88   10 0.594 0.094 17.6, 23.0 0.31
BALB/cByJ m 23.6 1.26   10 0.398 0.0532 20.8, 25.3 -0.28
BALB/cJ f 19.1 0.947   10 0.299 0.0495 17.9, 20.6 -0.4
BALB/cJ m 23.4 1.16   10 0.366 0.0494 22.2, 25.5 -0.43
C3H/HeJ f 17.5 1.82   5 0.815 0.104 15.8, 20.6 -1.67
C3H/HeJ m 25.8 1.45   5 0.647 0.056 25.0, 28.4 1.36
C57BL/6J f 17.7 0.958   20 0.214 0.0541 15.3, 19.1 -1.51
C57BL/6J m 21.9 1.42   15 0.366 0.0648 19.4, 23.8 -1.55
CBA/J f 20.3 2.28   10 0.721 0.112 17.2, 23.0 0.55
CBA/J m 24.6 2.46   15 0.634 0.1 20.1, 27.2 0.46
DBA/2J f 19.4 1.25   10 0.394 0.0641 17.5, 21.6 -0.17
DBA/2J m 22.0 2.67   15 0.69 0.122 17.4, 26.7 -1.48
FVB/NJ f 19.6 1.15   5 0.515 0.0587 18.6, 21.1 -0.01
FVB/NJ m 25.2 2.04   5 0.91 0.0808 21.6, 26.4 0.91
NOD.CB17-Prkdcscid/J f 21.2 1.55   5 0.695 0.0733 18.9, 22.8 1.26
NOD.CB17-Prkdcscid/J m 23.6 1.81   5 0.811 0.0769 21.7, 26.3 -0.28
NOD/ShiLtJ f 21.2 2.32   10 0.734 0.109 18.6, 25.1 1.26
NOD/ShiLtJ m 25.8 2.94   10 0.93 0.114 22.2, 30.8 1.36


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J f 18.9 0.8168 20.5123 17.2877
B6.129P2-Apoetm1Unc/J m 23.36 0.8168 24.9723 21.7477
B6D2F1/J f 20.82 0.8168 22.4323 19.2077
B6D2F1/J m 24.54 0.8168 26.1523 22.9277
BALB/cByJ f 19.99 0.5776 21.13 18.85
BALB/cByJ m 23.62 0.5776 24.76 22.48
BALB/cJ f 19.14 0.5776 20.28 18.0
BALB/cJ m 23.45 0.5776 24.59 22.31
C3H/HeJ f 17.5 0.8168 19.1123 15.8877
C3H/HeJ m 25.84 0.8168 27.4523 24.2277
C57BL/6J f 17.7 0.4084 18.5061 16.8939
C57BL/6J m 21.88 0.4716 22.8108 20.9492
CBA/J f 20.3 0.5776 21.44 19.16
CBA/J m 24.5733 0.4716 25.5042 23.6425
DBA/2J f 19.43 0.5776 20.57 18.29
DBA/2J m 22.0067 0.4716 22.9375 21.0758
FVB/NJ f 19.62 0.8168 21.2323 18.0077
FVB/NJ m 25.2 0.8168 26.8123 23.5877
NOD.CB17-Prkdcscid/J f 21.18 0.8168 22.7923 19.5677
NOD.CB17-Prkdcscid/J m 23.58 0.8168 25.1923 21.9677
NOD/ShiLtJ f 21.25 0.5776 22.39 20.11
NOD/ShiLtJ m 25.77 0.5776 26.91 24.63


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J both 21.13 0.5776 22.27 19.99
B6D2F1/J both 22.68 0.5776 23.82 21.54
BALB/cByJ both 21.805 0.4084 22.6111 20.9989
BALB/cJ both 21.295 0.4084 22.1011 20.4889
C3H/HeJ both 21.67 0.5776 22.81 20.53
C57BL/6J both 19.79 0.3119 20.4057 19.1743
CBA/J both 22.4367 0.3728 23.1726 21.7008
DBA/2J both 20.7183 0.3728 21.4542 19.9824
FVB/NJ both 22.41 0.5776 23.55 21.27
NOD.CB17-Prkdcscid/J both 22.38 0.5776 23.52 21.24
NOD/ShiLtJ both 23.51 0.4084 24.3161 22.7039




  GWAS USING LINEAR MIXED MODELS

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