Project measure / variable:   Puk1   corneal_thicknessR

ID, description, units MPD:22204   corneal_thicknessR   corneal thickness   [µm]  right eye  
Data set, strains Puk1   inbred   4 strains     sex: both     age: 13wks
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  STRAIN COMPARISON PLOT
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Puk1 - corneal thickness right eye



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested4 strains4 strains
Mean of the strain means107   µm 112   µm
Median of the strain means104   µm 108   µm
SD of the strain means± 9.15 ± 9.22
Coefficient of variation (CV)0.0858 0.0825
Min–max range of strain means99.4   –   120   µm 105   –   125   µm
Mean sample size per strain7.5   mice 7.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 432.0167 432.0167 10.0809 0.0025
strain 3 2691.1983 897.0661 20.9327 < 0.0001
sex:strain 3 203.9874 67.9958 1.5867 0.2037
Residuals 52 2228.4476 42.8548


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S2/SvPas f 103.0 2.57   10 0.814 0.0249 98.0, 106.0 -0.39
129S2/SvPas m 106.0 4.11   10 1.3 0.0387 99.0, 112.0 -0.62
BALB/cByJ f 104.0 5.94   9 1.98 0.0569 96.0, 113.0 -0.28
BALB/cByJ m 105.0 6.86   9 2.29 0.0653 95.0, 113.0 -0.73
C3HeB/FeJ f 120.0 11.0   4 5.52 0.0915 106.0, 132.0 1.46
C3HeB/FeJ m 125.0 7.47   6 3.05 0.0598 114.0, 137.0 1.44
C57BL/6J f 99.4 10.0   7 3.79 0.101 83.0, 108.0 -0.79
C57BL/6J m 111.0 5.32   5 2.38 0.0481 104.0, 117.0 -0.08


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S2/SvPas f 103.2 2.0701 107.354 99.046
129S2/SvPas m 106.3 2.0701 110.454 102.146
BALB/cByJ f 104.3333 2.1821 108.7121 99.9546
BALB/cByJ m 105.0 2.1821 109.3787 100.6213
C3HeB/FeJ f 120.5 3.2732 127.0681 113.9319
C3HeB/FeJ m 124.8333 2.6725 130.1962 119.4705
C57BL/6J f 99.4286 2.4743 104.3936 94.4635
C57BL/6J m 110.6 2.9276 116.4747 104.7253


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S2/SvPas both 104.75 1.4638 107.6873 101.8127
BALB/cByJ both 104.6667 1.543 107.7629 101.5704
C3HeB/FeJ both 122.6667 2.1128 126.9064 118.427
C57BL/6J both 105.0143 1.9166 108.8602 101.1684




GWAS analysis not available: SNP data is not available for enough strains (at least 4)