Project measure / variable:   Puk1   corneal_thicknessL

ID, description, units MPD:22203   corneal_thicknessL   corneal thickness   [µm]  left eye  
Data set, strains Puk1   inbred   4 strains     sex: both     age: 13wks
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  STRAIN COMPARISON PLOT
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Puk1 - corneal thickness left eye



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested4 strains4 strains
Mean of the strain means106   µm 107   µm
Median of the strain means102   µm 103   µm
SD of the strain means± 8.28 ± 10.1
Coefficient of variation (CV)0.0784 0.0947
Min–max range of strain means99.9   –   118   µm 100   –   122   µm
Mean sample size per strain8.2   mice 7.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 94.2084 94.2084 1.9291 0.1705
strain 3 3172.4898 1057.4966 21.6548 < 0.0001
sex:strain 3 72.3967 24.1322 0.4942 0.6878
Residuals 55 2685.8893 48.8344


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S2/SvPas f 102.0 5.13   10 1.62 0.0505 91.0, 109.0 -0.45
129S2/SvPas m 104.0 3.01   10 0.952 0.0289 99.0, 109.0 -0.3
BALB/cByJ f 99.9 9.3   10 2.94 0.0931 91.0, 120.0 -0.7
BALB/cByJ m 100.0 3.46   7 1.31 0.0346 94.0, 105.0 -0.69
C3HeB/FeJ f 118.0 4.92   5 2.2 0.0418 112.0, 122.0 1.48
C3HeB/FeJ m 122.0 7.18   6 2.93 0.0586 113.0, 133.0 1.48
C57BL/6J f 103.0 7.16   8 2.53 0.0696 90.0, 113.0 -0.33
C57BL/6J m 102.0 11.6   7 4.37 0.114 87.0, 115.0 -0.49


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S2/SvPas f 101.5 2.2098 105.9286 97.0714
129S2/SvPas m 104.2 2.2098 108.6286 99.7714
BALB/cByJ f 99.9 2.2098 104.3286 95.4714
BALB/cByJ m 100.0 2.6413 105.2932 94.7068
C3HeB/FeJ f 117.8 3.1252 124.063 111.537
C3HeB/FeJ m 122.5 2.8529 128.2173 116.7827
C57BL/6J f 102.875 2.4707 107.8264 97.9236
C57BL/6J m 101.5714 2.6413 106.8647 96.2782


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S2/SvPas both 102.85 1.5626 105.9815 99.7185
BALB/cByJ both 99.95 1.7219 103.4008 96.4992
C3HeB/FeJ both 120.15 2.1158 124.3901 115.9099
C57BL/6J both 102.2232 1.8084 105.8472 98.5992




GWAS analysis not available: SNP data is not available for enough strains (at least 4)