Project measure / variable:   Puk1   axial_lengthR

ID, description, units MPD:22202   axial_lengthR   eye axial length   [mm]  right eye  
Data set, strains Puk1   inbred   4 strains     sex: both     age: 13wks
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  STRAIN COMPARISON PLOT
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Puk1 - eye axial length right eye



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested4 strains4 strains
Mean of the strain means3.52   mm 3.54   mm
Median of the strain means3.52   mm 3.54   mm
SD of the strain means± 0.0287 ± 0.0387
Coefficient of variation (CV)0.00817 0.0109
Min–max range of strain means3.48   –   3.55   mm 3.50   –   3.59   mm
Mean sample size per strain7.5   mice 8.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0193 0.0193 28.0208 < 0.0001
strain 3 0.0456 0.0152 22.0668 < 0.0001
sex:strain 3 0.0077 0.0026 3.7361 0.0161
Residuals 56 0.0385 0.0007


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S2/SvPas f 3.48 0.0215   10 0.0068 0.00618 3.43, 3.5 -1.31
129S2/SvPas m 3.5 0.0292   9 0.00973 0.00833 3.46, 3.54 -1.16
BALB/cByJ f 3.52 0.0244   9 0.00813 0.00693 3.48, 3.55 0.09
BALB/cByJ m 3.53 0.0132   9 0.00441 0.00375 3.51, 3.55 -0.39
C3HeB/FeJ f 3.55 0.0189   4 0.00946 0.00534 3.52, 3.56 1.13
C3HeB/FeJ m 3.56 0.0341   6 0.0139 0.00957 3.51, 3.61 0.39
C57BL/6J f 3.52 0.0389   7 0.0147 0.0111 3.46, 3.57 0.09
C57BL/6J m 3.59 0.0246   10 0.00777 0.00686 3.54, 3.61 1.16


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S2/SvPas f 3.478 0.0083 3.4946 3.4614
129S2/SvPas m 3.5044 0.0087 3.522 3.4869
BALB/cByJ f 3.5178 0.0087 3.5353 3.5003
BALB/cByJ m 3.5267 0.0087 3.5442 3.5091
C3HeB/FeJ f 3.5475 0.0131 3.5738 3.5212
C3HeB/FeJ m 3.56 0.0107 3.5815 3.5385
C57BL/6J f 3.5214 0.0099 3.5413 3.5016
C57BL/6J m 3.586 0.0083 3.6026 3.5694


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S2/SvPas both 3.4912 0.006 3.5033 3.4791
BALB/cByJ both 3.5222 0.0062 3.5346 3.5098
C3HeB/FeJ both 3.5538 0.0085 3.5707 3.5368
C57BL/6J both 3.5537 0.0065 3.5667 3.5408




GWAS analysis not available: SNP data is not available for enough strains (at least 4)