Project measure / variable:   Wiltshire1   act_OFT

ID, description, units MPD:21401   act_OFT   total locomotor activity, 10 min   [n]  
Data set, strains Wiltshire1   inbred   38 strains     sex: both     age: 12-14wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Wiltshire1 - total locomotor activity, 10 min



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested37 strains37 strains
Mean of the strain means2913   n 2820   n
Median of the strain means2748   n 2733   n
SD of the strain means± 1113 ± 1047
Coefficient of variation (CV)0.382 0.371
Min–max range of strain means601   –   5290   n 532   –   4772   n
Mean sample size per strain12.5   mice 12.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 222806.1789 222806.1789 0.3531 0.5525
strain 35 930840679.5815 26595447.988 42.1495 < 0.0001
sex:strain 35 43854191.786 1252976.9082 1.9858 0.0007
Residuals 834 526236030.9732 630978.4544


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 1023.0 730.0   14 195.0 0.714 73.8, 2032.0 -1.7
129S1/SvImJ m 1653.0 720.0   14 192.0 0.436 148.0, 2726.0 -1.11
A/J f 601.0 410.0   14 110.0 0.682 58.4, 1421.0 -2.08
A/J m 532.0 225.0   14 60.0 0.422 143.0, 848.0 -2.18
AKR/J f 4031.0 1398.0   16 350.0 0.347 1014.0, 7726.0 1.0
AKR/J m 3798.0 634.0   14 170.0 0.167 2911.0, 4752.0 0.93
BALB/cByJ f 2442.0 427.0   13 119.0 0.175 1806.0, 3282.0 -0.42
BALB/cByJ m 2383.0 639.0   14 171.0 0.268 764.0, 3147.0 -0.42
BTBR T+ Itpr3tf/J f 3562.0 995.0   16 249.0 0.279 1845.0, 5959.0 0.58
BTBR T+ Itpr3tf/J m 4164.0 915.0   16 229.0 0.22 3036.0, 6261.0 1.28
BUB/BnJ f 2710.0 606.0   12 175.0 0.224 1798.0, 4219.0 -0.18
BUB/BnJ m 2348.0 503.0   7 190.0 0.214 1609.0, 3067.0 -0.45
C3H/HeJ f 2172.0 545.0   15 141.0 0.251 1242.0, 3415.0 -0.67
C3H/HeJ m 1808.0 347.0   15 89.6 0.192 1254.0, 2394.0 -0.97
C57BL/6J f 3311.0 773.0   27 149.0 0.233 2209.0, 5776.0 0.36
C57BL/6J m 3006.0 589.0   16 147.0 0.196 1731.0, 3901.0 0.18
C57BR/cdJ f 3347.0 1076.0   15 278.0 0.321 1788.0, 5661.0 0.39
C57BR/cdJ m 4246.0 813.0   14 217.0 0.191 2755.0, 5350.0 1.36
C58/J f 3774.0 2054.0   16 514.0 0.544 910.0, 7793.0 0.77
C58/J m 4289.0 1720.0   16 430.0 0.401 2147.0, 7509.0 1.4
CBA/J f 2302.0 345.0   15 89.0 0.15 1538.0, 2861.0 -0.55
CBA/J m 1824.0 392.0   15 101.0 0.215 1249.0, 2456.0 -0.95
CE/J f 5290.0 2253.0   4 1127.0 0.426 3166.0, 8191.0 2.14
CE/J m 2951.0 482.0   8 170.0 0.163 2385.0, 3604.0 0.13
CZECHII/EiJ f 2082.0 804.0   10 254.0 0.386 1210.0, 3598.0 -0.75
CZECHII/EiJ m 1930.0 606.0   8 214.0 0.314 1407.0, 3124.0 -0.85
DBA/2J f 2064.0 473.0   14 126.0 0.229 1207.0, 3131.0 -0.76
DBA/2J m 2054.0 406.0   14 108.0 0.198 1240.0, 2788.0 -0.73
DDY/JclSidSeyFrkJ m 1853.0 541.0   8 191.0 0.292 1421.0, 3134.0 -0.92
FVB/NJ f 3869.0 816.0   14 218.0 0.211 2450.0, 5405.0 0.86
FVB/NJ m 3764.0 480.0   14 128.0 0.127 3024.0, 4496.0 0.9
I/LnJ f 4166.0 1155.0   4 578.0 0.277 2957.0, 5305.0 1.13
I/LnJ m 4028.0 858.0   8 303.0 0.213 2272.0, 4976.0 1.15
KK/HlJ f 1715.0 539.0   12 155.0 0.314 813.0, 2606.0 -1.08
KK/HlJ m 1752.0 656.0   17 159.0 0.374 92.5, 3179.0 -1.02
LG/J f 3403.0 596.0   12 172.0 0.175 2348.0, 4774.0 0.44
LG/J m 2808.0 456.0   12 132.0 0.162 2071.0, 3402.0 -0.01
LP/J f 1248.0 589.0   10 186.0 0.472 574.0, 2409.0 -1.5
LP/J m 1475.0 669.0   10 212.0 0.454 140.0, 2353.0 -1.28
MA/MyJ f 5070.0 822.0   8 291.0 0.162 3884.0, 6517.0 1.94
MA/MyJ m 4772.0 1062.0   9 354.0 0.223 3196.0, 6488.0 1.86
MRL/MpJ f 2748.0 714.0   14 191.0 0.26 1688.0, 4124.0 -0.15
MRL/MpJ m 2382.0 527.0   14 141.0 0.221 1302.0, 3018.0 -0.42
NOD/ShiLtJ f 4068.0 1087.0   18 256.0 0.267 2863.0, 7120.0 1.04
NOD/ShiLtJ m 4125.0 859.0   17 208.0 0.208 2889.0, 5849.0 1.25
NON/ShiLtJ f 3570.0 684.0   16 171.0 0.192 2294.0, 5256.0 0.59
NON/ShiLtJ m 3776.0 545.0   16 136.0 0.144 2772.0, 4841.0 0.91
NOR/LtJ f 4564.0 852.0   10 269.0 0.187 3035.0, 5422.0 1.48
NOR/LtJ m 4643.0 791.0   10 250.0 0.17 3907.0, 6636.0 1.74
NZB/BlNJ f 2234.0 500.0   10 158.0 0.224 1006.0, 2702.0 -0.61
NZB/BlNJ m 2723.0 909.0   14 243.0 0.334 1540.0, 4443.0 -0.09
NZO/HlLtJ f 1231.0 259.0   11 78.1 0.211 800.0, 1601.0 -1.51
NZO/HlLtJ m 1191.0 185.0   11 55.8 0.155 904.0, 1416.0 -1.56
NZW/LacJ f 2400.0 454.0   13 126.0 0.189 1701.0, 3156.0 -0.46
PERA/EiJ f 2282.0 509.0   12 147.0 0.223 1573.0, 3225.0 -0.57
PERA/EiJ m 2141.0 549.0   8 194.0 0.256 1379.0, 3035.0 -0.65
P/J f 3016.0 843.0   2   596.0 0.279 2420.0, 3612.0 0.09
P/J m 3268.0 783.0   3 452.0 0.24 2803.0, 4172.0 0.43
PL/J f 3936.0 1002.0   18 236.0 0.255 2467.0, 7185.0 0.92
PL/J m 3813.0 866.0   18 204.0 0.227 2492.0, 5749.0 0.95
PWD/PhJ f 1803.0 509.0   10 161.0 0.283 1381.0, 3010.0 -1.0
PWD/PhJ m 1808.0 326.0   10 103.0 0.181 1341.0, 2354.0 -0.97
RIIIS/J f 2968.0 625.0   12 180.0 0.21 1727.0, 3981.0 0.05
RIIIS/J m 2733.0 428.0   15 110.0 0.157 2009.0, 3561.0 -0.08
SEA/GnJ f 2333.0 249.0   6 102.0 0.107 2002.0, 2728.0 -0.52
SEA/GnJ m 2559.0 260.0   3 150.0 0.101 2298.0, 2817.0 -0.25
SJL/J f 2495.0 468.0   16 117.0 0.188 1674.0, 3446.0 -0.38
SJL/J m 2486.0 548.0   16 137.0 0.221 1464.0, 3332.0 -0.32
SM/J f 3047.0 1116.0   14 298.0 0.366 275.0, 4126.0 0.12
SM/J m 3196.0 1018.0   14 272.0 0.318 2153.0, 5944.0 0.36
SWR/J f 2658.0 497.0   15 128.0 0.187 1529.0, 3476.0 -0.23
SWR/J m 2770.0 478.0   17 116.0 0.173 2189.0, 3703.0 -0.05
WSB/EiJ f 4228.0 913.0   10 289.0 0.216 2352.0, 5589.0 1.18
WSB/EiJ m 3282.0 697.0   10 221.0 0.212 2573.0, 4583.0 0.44


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 1023.4857 212.2967 1440.1843 606.7871
129S1/SvImJ m 1652.5714 212.2967 2069.27 1235.8728
A/J f 601.0286 212.2967 1017.7272 184.33
A/J m 531.8571 212.2967 948.5558 115.1585
AKR/J f 4031.0625 198.5854 4420.8484 3641.2766
AKR/J m 3798.2857 212.2967 4214.9843 3381.5871
BALB/cByJ f 2441.6923 220.3107 2874.1209 2009.2637
BALB/cByJ m 2383.2857 212.2967 2799.9843 1966.5871
BTBR T+ Itpr3tf/J f 3562.375 198.5854 3952.1609 3172.5891
BTBR T+ Itpr3tf/J m 4164.375 198.5854 4554.1609 3774.5891
BUB/BnJ f 2710.25 229.3066 3160.336 2260.164
BUB/BnJ m 2348.4286 300.2329 2937.7294 1759.1277
C3H/HeJ f 2171.6 205.0981 2574.1691 1769.0309
C3H/HeJ m 1807.8 205.0981 2210.3691 1405.2309
C57BL/6J f 3311.3704 152.8711 3611.4277 3011.3131
C57BL/6J m 3005.9375 198.5854 3395.7234 2616.1516
C57BR/cdJ f 3347.4667 205.0981 3750.0358 2944.8976
C57BR/cdJ m 4245.8571 212.2967 4662.5558 3829.1585
C58/J f 3774.125 198.5854 4163.9109 3384.3391
C58/J m 4289.25 198.5854 4679.0359 3899.4641
CBA/J f 2302.1333 205.0981 2704.7024 1899.5642
CBA/J m 1824.2 205.0981 2226.7691 1421.6309
CE/J f 5289.75 397.1708 6069.3217 4510.1783
CE/J m 2950.875 280.8421 3502.1155 2399.6345
CZECHII/EiJ f 2081.6 251.1928 2574.6445 1588.5555
CZECHII/EiJ m 1930.25 280.8421 2481.4905 1379.0095
DBA/2J f 2063.6429 212.2967 2480.3415 1646.9442
DBA/2J m 2053.5714 212.2967 2470.27 1636.8728
FVB/NJ f 3868.6429 212.2967 4285.3415 3451.9442
FVB/NJ m 3763.8571 212.2967 4180.5558 3347.1585
I/LnJ f 4166.0 397.1708 4945.5717 3386.4283
I/LnJ m 4027.875 280.8421 4579.1155 3476.6345
KK/HlJ f 1715.3333 229.3066 2165.4193 1265.2474
KK/HlJ m 1751.9706 192.6561 2130.1184 1373.8228
LG/J f 3403.4167 229.3066 3853.5026 2953.3307
LG/J m 2808.4167 229.3066 3258.5026 2358.3307
LP/J f 1248.2 251.1928 1741.2445 755.1555
LP/J m 1474.7 251.1928 1967.7445 981.6555
MA/MyJ f 5069.875 280.8421 5621.1155 4518.6345
MA/MyJ m 4771.7778 264.7805 5291.4923 4252.0633
MRL/MpJ f 2747.6429 212.2967 3164.3415 2330.9442
MRL/MpJ m 2381.7143 212.2967 2798.4129 1965.0157
NOD/ShiLtJ f 4068.1111 187.2281 4435.6048 3700.6175
NOD/ShiLtJ m 4124.8235 192.6561 4502.9714 3746.6757
NON/ShiLtJ f 3570.0625 198.5854 3959.8484 3180.2766
NON/ShiLtJ m 3775.625 198.5854 4165.4109 3385.8391
NOR/LtJ f 4564.5 251.1928 5057.5445 4071.4555
NOR/LtJ m 4642.7 251.1928 5135.7445 4149.6555
NZB/BlNJ f 2234.2 251.1928 2727.2445 1741.1555
NZB/BlNJ m 2722.7143 212.2967 3139.4129 2306.0157
NZO/HlLtJ f 1231.0 239.503 1701.0994 760.9006
NZO/HlLtJ m 1190.9091 239.503 1661.0085 720.8096
PERA/EiJ f 2281.6667 229.3066 2731.7526 1831.5807
PERA/EiJ m 2141.375 280.8421 2692.6155 1590.1345
P/J f 3016.0 561.6843 4118.4809 1913.5191
P/J m 3267.6667 458.6133 4167.8386 2367.4948
PL/J f 3936.0556 187.2281 4303.5492 3568.5619
PL/J m 3812.9444 187.2281 4180.4381 3445.4508
PWD/PhJ f 1802.9 251.1928 2295.9445 1309.8555
PWD/PhJ m 1808.4 251.1928 2301.4445 1315.3555
RIIIS/J f 2968.4167 229.3066 3418.5026 2518.3307
RIIIS/J m 2732.8667 205.0981 3135.4358 2330.2976
SEA/GnJ f 2333.3333 324.2886 2969.851 1696.8157
SEA/GnJ m 2559.3333 458.6133 3459.5052 1659.1614
SJL/J f 2495.0 198.5854 2884.7859 2105.2141
SJL/J m 2486.375 198.5854 2876.1609 2096.5891
SM/J f 3047.2143 212.2967 3463.9129 2630.5157
SM/J m 3196.5 212.2967 3613.1986 2779.8014
SWR/J f 2657.8 205.0981 3060.3691 2255.2309
SWR/J m 2769.7059 192.6561 3147.8537 2391.558
WSB/EiJ f 4228.4 251.1928 4721.4445 3735.3555
WSB/EiJ m 3282.5 251.1928 3775.5445 2789.4555


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1338.0286 150.1164 1632.679 1043.3782
A/J both 566.4429 150.1164 861.0933 271.7924
AKR/J both 3914.6741 145.3496 4199.9681 3629.3801
BALB/cByJ both 2412.489 152.9761 2712.7523 2112.2257
BTBR T+ Itpr3tf/J both 3863.375 140.4211 4138.9952 3587.7548
BUB/BnJ both 2529.3393 188.8924 2900.0996 2158.579
C3H/HeJ both 1989.7 145.0263 2274.3593 1705.0407
C57BL/6J both 3158.6539 125.3054 3404.6048 2912.703
C57BR/cdJ both 3796.6619 147.5933 4086.3599 3506.9639
C58/J both 4031.6875 140.4211 4307.3077 3756.0673
CBA/J both 2063.1667 145.0263 2347.826 1778.5073
CE/J both 4120.3125 243.2164 4597.7007 3642.9243
CZECHII/EiJ both 2005.925 188.3946 2375.7083 1636.1417
DBA/2J both 2058.6071 150.1164 2353.2576 1763.9567
FVB/NJ both 3816.25 150.1164 4110.9004 3521.5996
I/LnJ both 4096.9375 243.2164 4574.3257 3619.5493
KK/HlJ both 1733.652 149.7481 2027.5793 1439.7246
LG/J both 3105.9167 162.1443 3424.1755 2787.6578
LP/J both 1361.45 177.6202 1710.0851 1012.8149
MA/MyJ both 4920.8264 192.9903 5299.6302 4542.0226
MRL/MpJ both 2564.6786 150.1164 2859.329 2270.0282
NOD/ShiLtJ both 4096.4673 134.3231 4360.1183 3832.8163
NON/ShiLtJ both 3672.8438 140.4211 3948.464 3397.2235
NOR/LtJ both 4603.6 177.6202 4952.2351 4254.9649
NZB/BlNJ both 2478.4571 164.4443 2801.2305 2155.6838
NZO/HlLtJ both 1210.9545 169.3542 1543.365 878.544
PERA/EiJ both 2211.5208 181.2828 2567.345 1855.6966
P/J both 3141.8333 362.5656 3853.4817 2430.185
PL/J both 3874.5 132.3903 4134.3572 3614.6428
PWD/PhJ both 1805.65 177.6202 2154.2851 1457.0149
RIIIS/J both 2850.6417 153.8236 3152.5685 2548.7148
SEA/GnJ both 2446.3333 280.8421 2997.5738 1895.0929
SJL/J both 2490.6875 140.4211 2766.3077 2215.0673
SM/J both 3121.8571 150.1164 3416.5076 2827.2067
SWR/J both 2713.7529 140.6961 2989.9131 2437.5928
WSB/EiJ both 3755.45 177.6202 4104.0851 3406.8149




  GWAS USING LINEAR MIXED MODELS