Project measure / variable:   Lake1   pulse_sd

ID, description, units MPD:19952   pulse_sd   pulse rate variability across tests   [n/min]  
Data set, strains Lake1   B6.A consomic w/par   23 strains     sex: both     age: 10wks
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  STRAIN COMPARISON PLOT
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Lake1 - pulse rate variability across tests



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested23 strains23 strains
Mean of the strain means42.3   n/min 47.1   n/min
Median of the strain means39.5   n/min 45.7   n/min
SD of the strain means± 7.42 ± 6.74
Coefficient of variation (CV)0.176 0.143
Min–max range of strain means33.1   –   60.0   n/min 32.6   –   61.6   n/min
Mean sample size per strain8.0   mice 8.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1998.9958 1998.9958 9.9772 0.0017
strain 22 8770.7791 398.6718 1.9898 0.0057
sex:strain 22 9124.8222 414.7646 2.0701 0.0036
Residuals 325 65115.9953 200.3569


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 38.3 6.74   8 2.38 0.176 29.0, 47.3 -0.53
A/J m 42.4 14.3   8 5.05 0.337 24.5, 65.7 -0.69
B6.A-Chr1 f 60.0 28.7   8 10.1 0.478 28.1, 118.0 2.39
B6.A-Chr1 m 43.8 8.17   8 2.89 0.186 35.1, 59.9 -0.49
B6.A-Chr10 f 45.7 16.7   9 5.55 0.364 26.7, 81.7 0.46
B6.A-Chr10 m 49.8 13.5   8 4.76 0.27 36.2, 77.5 0.4
B6.A-Chr11 f 39.5 6.86   8 2.43 0.174 30.6, 52.6 -0.37
B6.A-Chr11 m 51.3 23.3   8 8.25 0.455 33.7, 105.0 0.63
B6.A-Chr12 f 37.9 9.72   8 3.44 0.256 26.8, 52.4 -0.59
B6.A-Chr12 m 46.9 18.9   8 6.67 0.402 26.6, 75.6 -0.03
B6.A-Chr13 f 44.2 9.39   8 3.32 0.212 32.3, 58.5 0.26
B6.A-Chr13 m 44.7 16.4   8 5.79 0.366 28.6, 80.2 -0.35
B6.A-Chr14 f 35.9 10.3   8 3.65 0.287 25.2, 56.9 -0.86
B6.A-Chr14 m 40.5 8.63   8 3.05 0.213 28.9, 53.7 -0.98
B6.A-Chr15 f 57.7 15.0   9 5.0 0.26 43.1, 86.3 2.08
B6.A-Chr15 m 45.4 16.8   8 5.93 0.369 25.9, 82.4 -0.25
B6.A-Chr16 f 39.3 5.09   6 2.08 0.13 31.7, 43.8 -0.4
B6.A-Chr16 m 49.2 14.8   8 5.22 0.3 27.8, 75.8 0.31
B6.A-Chr17 f 33.9 5.83   8 2.06 0.172 25.3, 43.1 -1.13
B6.A-Chr17 m 42.5 10.5   8 3.72 0.247 29.3, 60.7 -0.68
B6.A-Chr18 f 37.1 9.57   8 3.38 0.258 23.6, 51.1 -0.69
B6.A-Chr18 m 32.6 8.44   8 2.98 0.259 17.6, 43.4 -2.15
B6.A-Chr19 f 43.5 12.7   8 4.49 0.292 23.1, 62.8 0.17
B6.A-Chr19 m 61.6 19.6   8 6.94 0.319 42.5, 94.6 2.16
B6.A-Chr2 f 44.3 22.4   8 7.92 0.506 21.9, 94.2 0.28
B6.A-Chr2 m 57.7 28.3   8 10.0 0.49 26.5, 105.0 1.58
B6.A-Chr3 f 45.1 17.1   8 6.03 0.378 27.0, 76.8 0.38
B6.A-Chr3 m 43.5 12.7   8 4.48 0.291 30.2, 67.5 -0.53
B6.A-Chr4 f 38.2 6.73   8 2.38 0.176 33.1, 53.3 -0.55
B6.A-Chr4 m 48.7 12.5   8 4.43 0.257 32.2, 67.8 0.24
B6.A-Chr5 f 58.2 23.7   8 8.38 0.407 33.3, 109.0 2.15
B6.A-Chr5 m 40.2 5.0   8 1.77 0.124 32.8, 48.3 -1.02
B6.A-Chr6 f 37.1 8.4   7 3.18 0.227 27.7, 52.0 -0.69
B6.A-Chr6 m 57.4 14.4   8 5.09 0.251 37.8, 81.7 1.53
B6.A-Chr7 f 40.7 11.6   8 4.11 0.286 26.5, 58.3 -0.21
B6.A-Chr7 m 52.3 12.7   8 4.49 0.243 34.6, 74.2 0.78
B6.A-Chr8 f 42.6 7.53   8 2.66 0.177 30.4, 52.4 0.05
B6.A-Chr8 m 46.2 13.8   12 3.98 0.298 32.7, 80.4 -0.13
B6.A-Chr9 f 39.3 6.97   8 2.46 0.177 29.1, 50.6 -0.4
B6.A-Chr9 m 55.9 14.1   8 4.99 0.252 39.3, 75.9 1.31
B6.A-ChrX f 35.7 9.96   8 3.52 0.279 23.7, 52.4 -0.88
B6.A-ChrX m 45.7 14.7   8 5.19 0.321 24.7, 75.0 -0.2
B6.A-ChrY f 44.5 15.0   8 5.3 0.337 29.3, 71.1 0.3
B6.A-ChrY m 44.0 9.83   8 3.48 0.223 33.2, 59.6 -0.46
C57BL/6J f 33.1 9.26   8 3.27 0.28 22.4, 46.3 -1.23
C57BL/6J m 40.5 4.76   8 1.68 0.117 35.4, 49.4 -0.98


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J f 38.325 5.0045 48.1702 28.4798
A/J m 42.4125 5.0045 52.2577 32.5673
B6.A-Chr1 f 60.0375 5.0045 69.8827 50.1923
B6.A-Chr1 m 43.825 5.0045 53.6702 33.9798
B6.A-Chr10 f 45.7333 4.7182 55.0155 36.4512
B6.A-Chr10 m 49.8375 5.0045 59.6827 39.9923
B6.A-Chr11 f 39.5125 5.0045 49.3577 29.6673
B6.A-Chr11 m 51.275 5.0045 61.1202 41.4298
B6.A-Chr12 f 37.9125 5.0045 47.7577 28.0673
B6.A-Chr12 m 46.95 5.0045 56.7952 37.1048
B6.A-Chr13 f 44.2125 5.0045 54.0577 34.3673
B6.A-Chr13 m 44.7375 5.0045 54.5827 34.8923
B6.A-Chr14 f 35.925 5.0045 45.7702 26.0798
B6.A-Chr14 m 40.5 5.0045 50.3452 30.6548
B6.A-Chr15 f 57.7444 4.7182 67.0266 48.4623
B6.A-Chr15 m 45.3875 5.0045 55.2327 35.5423
B6.A-Chr16 f 39.3333 5.7787 50.7016 27.965
B6.A-Chr16 m 49.175 5.0045 59.0202 39.3298
B6.A-Chr17 f 33.9375 5.0045 43.7827 24.0923
B6.A-Chr17 m 42.55 5.0045 52.3952 32.7048
B6.A-Chr18 f 37.0625 5.0045 46.9077 27.2173
B6.A-Chr18 m 32.5875 5.0045 42.4327 22.7423
B6.A-Chr19 f 43.475 5.0045 53.3202 33.6298
B6.A-Chr19 m 61.6 5.0045 71.4452 51.7548
B6.A-Chr2 f 44.325 5.0045 54.1702 34.4798
B6.A-Chr2 m 57.7125 5.0045 67.5577 47.8673
B6.A-Chr3 f 45.125 5.0045 54.9702 35.2798
B6.A-Chr3 m 43.525 5.0045 53.3702 33.6798
B6.A-Chr4 f 38.2125 5.0045 48.0577 28.3673
B6.A-Chr4 m 48.7375 5.0045 58.5827 38.8923
B6.A-Chr5 f 58.175 5.0045 68.0202 48.3298
B6.A-Chr5 m 40.1625 5.0045 50.0077 30.3173
B6.A-Chr6 f 37.0714 5.35 47.5964 26.5464
B6.A-Chr6 m 57.4 5.0045 67.2452 47.5548
B6.A-Chr7 f 40.6875 5.0045 50.5327 30.8423
B6.A-Chr7 m 52.3375 5.0045 62.1827 42.4923
B6.A-Chr8 f 42.6125 5.0045 52.4577 32.7673
B6.A-Chr8 m 46.2083 4.0861 54.2469 38.1697
B6.A-Chr9 f 39.325 5.0045 49.1702 29.4798
B6.A-Chr9 m 55.9375 5.0045 65.7827 46.0923
B6.A-ChrX f 35.7125 5.0045 45.5577 25.8673
B6.A-ChrX m 45.6875 5.0045 55.5327 35.8423
B6.A-ChrY f 44.4875 5.0045 54.3327 34.6423
B6.A-ChrY m 44.0 5.0045 53.8452 34.1548
C57BL/6J f 33.1125 5.0045 42.9577 23.2673
C57BL/6J m 40.5 5.0045 50.3452 30.6548


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
A/J both 40.3688 3.5387 47.3304 33.4071
B6.A-Chr1 both 51.9312 3.5387 58.8929 44.9696
B6.A-Chr10 both 47.7854 3.439 54.5509 41.0199
B6.A-Chr11 both 45.3938 3.5387 52.3554 38.4321
B6.A-Chr12 both 42.4313 3.5387 49.3929 35.4696
B6.A-Chr13 both 44.475 3.5387 51.4366 37.5134
B6.A-Chr14 both 38.2125 3.5387 45.1741 31.2509
B6.A-Chr15 both 51.566 3.439 58.3315 44.8005
B6.A-Chr16 both 44.2542 3.8222 51.7736 36.7348
B6.A-Chr17 both 38.2438 3.5387 45.2054 31.2821
B6.A-Chr18 both 34.825 3.5387 41.7866 27.8634
B6.A-Chr19 both 52.5375 3.5387 59.4991 45.5759
B6.A-Chr2 both 51.0188 3.5387 57.9804 44.0571
B6.A-Chr3 both 44.325 3.5387 51.2866 37.3634
B6.A-Chr4 both 43.475 3.5387 50.4366 36.5134
B6.A-Chr5 both 49.1688 3.5387 56.1304 42.2071
B6.A-Chr6 both 47.2357 3.6629 54.4417 40.0297
B6.A-Chr7 both 46.5125 3.5387 53.4741 39.5509
B6.A-Chr8 both 44.4104 3.2304 50.7655 38.0554
B6.A-Chr9 both 47.6313 3.5387 54.5929 40.6696
B6.A-ChrX both 40.7 3.5387 47.6616 33.7384
B6.A-ChrY both 44.2438 3.5387 51.2054 37.2821
C57BL/6J both 36.8063 3.5387 43.7679 29.8446




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA