Phenotype measure

ID, description, units MPD:19930   TFA   total fatty acids (plasma TFA)   [mg/dL]
Data set, strains Lake1   B6.A consomic w/par   23 strains     sex: both     age: 8wks
Procedure lipid profile
Ontology mappings


  STRAIN COMPARISON PLOT
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Lake1 - total fatty acids (plasma TFA)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested23 strains23 strains
Mean of the strain means2.33   mg/dL 2.63   mg/dL
Median of the strain means2.28   mg/dL 2.46   mg/dL
SD of the strain means± 0.313 ± 0.331
Coefficient of variation (CV)0.134 0.126
Min–max range of strain means1.80   –   3.14   mg/dL 2.20   –   3.36   mg/dL
Mean sample size per strain7.6   mice 7.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 8.0197 8.0197 67.5761 < 0.0001
strain 22 17.8768 0.8126 6.847 < 0.0001
sex:strain 22 16.7986 0.7636 6.4341 < 0.0001
Residuals 307 36.4336 0.1187


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 2.47 0.321   8 0.113 0.13 1.97, 2.88 0.44
A/J m 2.95 0.486   8 0.172 0.164 2.26, 3.55 0.98
B6.A-Chr1 f 2.61 0.453   5 0.202 0.174 2.24, 3.27 0.89
B6.A-Chr1 m 2.9 0.289   8 0.102 0.0998 2.4, 3.26 0.83
B6.A-Chr10 f 2.28 0.24   8 0.0848 0.105 2.0, 2.64 -0.17
B6.A-Chr10 m 2.41 0.17   7 0.0642 0.0707 2.27, 2.66 -0.66
B6.A-Chr11 f 2.01 0.428   8 0.151 0.213 1.41, 2.59 -1.03
B6.A-Chr11 m 2.34 0.144   7 0.0543 0.0613 2.08, 2.54 -0.87
B6.A-Chr12 f 1.97 0.216   8 0.0765 0.11 1.69, 2.27 -1.16
B6.A-Chr12 m 3.36 0.477   8 0.169 0.142 2.71, 4.09 2.22
B6.A-Chr13 f 2.09 0.222   8 0.0786 0.106 1.82, 2.41 -0.77
B6.A-Chr13 m 2.43 0.539   8 0.191 0.221 1.74, 3.55 -0.6
B6.A-Chr14 f 1.98 0.492   8 0.174 0.249 1.51, 3.12 -1.13
B6.A-Chr14 m 2.93 0.493   8 0.174 0.168 2.0, 3.5 0.92
B6.A-Chr15 f 1.8 0.202   6 0.0825 0.113 1.55, 2.1 -1.7
B6.A-Chr15 m 2.34 0.264   8 0.0932 0.113 1.91, 2.69 -0.87
B6.A-Chr16 f 1.98 0.193   8 0.0681 0.0974 1.8, 2.32 -1.13
B6.A-Chr16 m 2.46 0.374   8 0.132 0.152 1.73, 2.91 -0.51
B6.A-Chr17 f 2.5 0.43   5 0.192 0.172 1.77, 2.81 0.53
B6.A-Chr17 m 2.2 0.182   8 0.0644 0.0828 1.84, 2.44 -1.29
B6.A-Chr18 f 2.18 0.296   8 0.105 0.135 1.65, 2.65 -0.49
B6.A-Chr18 m 2.7 0.41   8 0.145 0.152 1.96, 3.22 0.22
B6.A-Chr19 f 2.26 0.389   7 0.147 0.172 1.69, 2.79 -0.23
B6.A-Chr19 m 3.09 0.325   8 0.115 0.105 2.69, 3.62 1.4
B6.A-Chr2 f 2.65 0.277   8 0.098 0.105 2.24, 3.02 1.01
B6.A-Chr2 m 2.44 0.283   5 0.127 0.116 2.05, 2.77 -0.57
B6.A-Chr3 f 2.39 0.398   8 0.141 0.167 2.02, 3.1 0.18
B6.A-Chr3 m 2.26 0.262   8 0.0926 0.116 1.94, 2.84 -1.11
B6.A-Chr4 f 2.42 0.31   8 0.11 0.128 2.03, 2.92 0.28
B6.A-Chr4 m 2.46 0.188   8 0.0663 0.0762 2.17, 2.79 -0.51
B6.A-Chr5 f 2.19 0.133   8 0.0469 0.0605 2.01, 2.42 -0.46
B6.A-Chr5 m 2.87 0.261   8 0.0923 0.0908 2.59, 3.39 0.74
B6.A-Chr6 f 2.22 0.27   8 0.0955 0.122 1.79, 2.65 -0.36
B6.A-Chr6 m 2.35 0.276   8 0.0978 0.118 1.93, 2.81 -0.84
B6.A-Chr7 f 2.46 0.259   8 0.0914 0.105 2.14, 2.98 0.41
B6.A-Chr7 m 2.67 0.148   8 0.0523 0.0553 2.47, 2.84 0.13
B6.A-Chr8 f 2.24 0.303   8 0.107 0.135 1.85, 2.62 -0.3
B6.A-Chr8 m 2.5 0.344   11 0.104 0.138 2.09, 3.21 -0.38
B6.A-Chr9 f 2.85 0.495   6 0.202 0.174 2.42, 3.63 1.65
B6.A-Chr9 m 2.22 0.077   8 0.0272 0.0347 2.09, 2.3 -1.23
B6.A-ChrX f 2.63 0.488   8 0.173 0.186 1.98, 3.11 0.95
B6.A-ChrX m 2.44 0.304   8 0.107 0.125 2.08, 2.94 -0.57
B6.A-ChrY f 2.33 0.273   8 0.0966 0.117 2.08, 2.91 -0.01
B6.A-ChrY m 3.0 0.636   6 0.26 0.212 2.49, 3.98 1.13
C57BL/6J f 3.14 0.573   8 0.202 0.182 2.5, 4.06 2.58
C57BL/6J m 3.1 0.328   8 0.116 0.106 2.71, 3.57 1.43


  LEAST SQUARES MEANS (ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J f 2.4725 0.1218 2.7122 2.2328
A/J m 2.9537 0.1218 3.1934 2.7141
B6.A-Chr1 f 2.608 0.1541 2.9112 2.3048
B6.A-Chr1 m 2.895 0.1218 3.1347 2.6553
B6.A-Chr10 f 2.2825 0.1218 2.5222 2.0428
B6.A-Chr10 m 2.4057 0.1302 2.6619 2.1495
B6.A-Chr11 f 2.0138 0.1218 2.2534 1.7741
B6.A-Chr11 m 2.3443 0.1302 2.6005 2.0881
B6.A-Chr12 f 1.9675 0.1218 2.2072 1.7278
B6.A-Chr12 m 3.3562 0.1218 3.5959 3.1166
B6.A-Chr13 f 2.0925 0.1218 2.3322 1.8528
B6.A-Chr13 m 2.4337 0.1218 2.6734 2.1941
B6.A-Chr14 f 1.975 0.1218 2.2147 1.7353
B6.A-Chr14 m 2.9337 0.1218 3.1734 2.6941
B6.A-Chr15 f 1.7967 0.1406 2.0734 1.5199
B6.A-Chr15 m 2.3375 0.1218 2.5772 2.0978
B6.A-Chr16 f 1.9762 0.1218 2.2159 1.7366
B6.A-Chr16 m 2.4562 0.1218 2.6959 2.2166
B6.A-Chr17 f 2.502 0.1541 2.8052 2.1988
B6.A-Chr17 m 2.1987 0.1218 2.4384 1.9591
B6.A-Chr18 f 2.1837 0.1218 2.4234 1.9441
B6.A-Chr18 m 2.6962 0.1218 2.9359 2.4566
B6.A-Chr19 f 2.26 0.1302 2.5162 2.0038
B6.A-Chr19 m 3.0925 0.1218 3.3322 2.8528
B6.A-Chr2 f 2.6525 0.1218 2.8922 2.4128
B6.A-Chr2 m 2.442 0.1541 2.7452 2.1388
B6.A-Chr3 f 2.3888 0.1218 2.6284 2.1491
B6.A-Chr3 m 2.2587 0.1218 2.4984 2.0191
B6.A-Chr4 f 2.4212 0.1218 2.6609 2.1816
B6.A-Chr4 m 2.46 0.1218 2.6997 2.2203
B6.A-Chr5 f 2.1925 0.1218 2.4322 1.9528
B6.A-Chr5 m 2.8737 0.1218 3.1134 2.6341
B6.A-Chr6 f 2.2212 0.1218 2.4609 1.9816
B6.A-Chr6 m 2.3487 0.1218 2.5884 2.1091
B6.A-Chr7 f 2.465 0.1218 2.7047 2.2253
B6.A-Chr7 m 2.675 0.1218 2.9147 2.4353
B6.A-Chr8 f 2.235 0.1218 2.4747 1.9953
B6.A-Chr8 m 2.5009 0.1039 2.7053 2.2965
B6.A-Chr9 f 2.845 0.1406 3.1217 2.5683
B6.A-Chr9 m 2.2225 0.1218 2.4622 1.9828
B6.A-ChrX f 2.63 0.1218 2.8697 2.3903
B6.A-ChrX m 2.4375 0.1218 2.6772 2.1978
B6.A-ChrY f 2.325 0.1218 2.5647 2.0853
B6.A-ChrY m 3.0017 0.1406 3.2784 2.7249
C57BL/6J f 3.1387 0.1218 3.3784 2.8991
C57BL/6J m 3.1025 0.1218 3.3422 2.8628


  LEAST SQUARES MEANS (ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
A/J both 2.7131 0.0861 2.8826 2.5437
B6.A-Chr1 both 2.7515 0.0982 2.9447 2.5583
B6.A-Chr10 both 2.3441 0.0891 2.5195 2.1687
B6.A-Chr11 both 2.179 0.0891 2.3544 2.0036
B6.A-Chr12 both 2.6619 0.0861 2.8313 2.4924
B6.A-Chr13 both 2.2631 0.0861 2.4326 2.0937
B6.A-Chr14 both 2.4544 0.0861 2.6238 2.2849
B6.A-Chr15 both 2.0671 0.093 2.2501 1.884
B6.A-Chr16 both 2.2162 0.0861 2.3857 2.0468
B6.A-Chr17 both 2.3504 0.0982 2.5436 2.1572
B6.A-Chr18 both 2.44 0.0861 2.6095 2.2705
B6.A-Chr19 both 2.6762 0.0891 2.8517 2.5008
B6.A-Chr2 both 2.5472 0.0982 2.7405 2.354
B6.A-Chr3 both 2.3238 0.0861 2.4932 2.1543
B6.A-Chr4 both 2.4406 0.0861 2.6101 2.2712
B6.A-Chr5 both 2.5331 0.0861 2.7026 2.3637
B6.A-Chr6 both 2.285 0.0861 2.4545 2.1155
B6.A-Chr7 both 2.57 0.0861 2.7395 2.4005
B6.A-Chr8 both 2.368 0.08 2.5254 2.2105
B6.A-Chr9 both 2.5337 0.093 2.7168 2.3507
B6.A-ChrX both 2.5337 0.0861 2.7032 2.3643
B6.A-ChrY both 2.6633 0.093 2.8464 2.4803
C57BL/6J both 3.1206 0.0861 3.2901 2.9512