Phenotype measure:   Lake1   PLT

ID, description, units MPD:19919   PLT   platelet count (PLT; units per volume x 103)   [n/µL]
Data set, strains Lake1   B6.A consomic w/par   23 strains     sex: both     age: 7wks
Procedure complete blood count
Ontology mappings

  STRAIN COMPARISON PLOT
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Lake1 - platelet count (PLT; units per volume x 103)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested23 strains23 strains
Mean of the strain means1038   n/µL 1200   n/µL
Median of the strain means1017   n/µL 1200   n/µL
SD of the strain means± 91.3 ± 70.9
Coefficient of variation (CV)0.0880 0.0590
Min–max range of strain means833   –   1196   n/µL 1064   –   1294   n/µL
Mean sample size per strain7.9   mice 7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 2493680.3596 2493680.3596 194.0715 < 0.0001
strain 22 1525352.8343 69334.2197 5.396 < 0.0001
sex:strain 22 817431.6706 37155.985 2.8917 < 0.0001
Residuals 321 4124620.002 12849.2835


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 1196.0 244.0   8 86.2 0.204 1055.0, 1778.0 1.73
A/J m 1175.0 128.0   8 45.2 0.109 924.0, 1332.0 -0.36
B6.A-Chr1 f 1000.0 182.0   8 64.3 0.182 727.0, 1282.0 -0.42
B6.A-Chr1 m 1087.0 112.0   8 39.6 0.103 850.0, 1202.0 -1.6
B6.A-Chr10 f 1058.0 148.0   7 55.9 0.14 897.0, 1252.0 0.22
B6.A-Chr10 m 1276.0 85.2   8 30.1 0.0668 1125.0, 1411.0 1.07
B6.A-Chr11 f 951.0 169.0   8 59.7 0.177 732.0, 1172.0 -0.95
B6.A-Chr11 m 1223.0 133.0   8 47.0 0.109 983.0, 1364.0 0.32
B6.A-Chr12 f 833.0 52.3   8 18.5 0.0628 746.0, 888.0 -2.24
B6.A-Chr12 m 1136.0 99.9   8 35.3 0.088 995.0, 1293.0 -0.91
B6.A-Chr13 f 1018.0 66.0   8 23.3 0.0648 923.0, 1101.0 -0.22
B6.A-Chr13 m 1161.0 135.0   8 47.8 0.117 959.0, 1311.0 -0.55
B6.A-Chr14 f 1017.0 179.0   8 63.3 0.176 762.0, 1240.0 -0.23
B6.A-Chr14 m 1288.0 98.0   8 34.7 0.0761 1196.0, 1482.0 1.24
B6.A-Chr15 f 939.0 82.2   9 27.4 0.0876 762.0, 1018.0 -1.08
B6.A-Chr15 m 1095.0 83.1   7 31.4 0.0759 982.0, 1183.0 -1.49
B6.A-Chr16 f 1002.0 105.0   8 37.2 0.105 861.0, 1168.0 -0.39
B6.A-Chr16 m 1208.0 101.0   8 35.7 0.0836 1083.0, 1337.0 0.11
B6.A-Chr17 f 1113.0 99.5   8 35.2 0.0894 942.0, 1288.0 0.82
B6.A-Chr17 m 1281.0 116.0   8 40.9 0.0904 1111.0, 1411.0 1.14
B6.A-Chr18 f 981.0 139.0   8 49.1 0.142 738.0, 1155.0 -0.62
B6.A-Chr18 m 1294.0 99.4   8 35.2 0.0768 1149.0, 1425.0 1.32
B6.A-Chr19 f 1073.0 114.0   8 40.4 0.107 962.0, 1240.0 0.38
B6.A-Chr19 m 1168.0 124.0   7 46.9 0.106 919.0, 1307.0 -0.46
B6.A-Chr2 f 1136.0 103.0   7 39.0 0.0908 982.0, 1265.0 1.07
B6.A-Chr2 m 1263.0 61.7   8 21.8 0.0489 1168.0, 1382.0 0.88
B6.A-Chr3 f 1135.0 215.0   8 76.0 0.189 882.0, 1527.0 1.06
B6.A-Chr3 m 1292.0 138.0   8 48.7 0.107 1042.0, 1473.0 1.29
B6.A-Chr4 f 1149.0 105.0   8 37.1 0.0914 1031.0, 1272.0 1.22
B6.A-Chr4 m 1268.0 84.1   7 31.8 0.0663 1155.0, 1409.0 0.96
B6.A-Chr5 f 1068.0 103.0   8 36.4 0.0964 918.0, 1189.0 0.33
B6.A-Chr5 m 1200.0 80.9   8 28.6 0.0674 1081.0, 1298.0 0.0
B6.A-Chr6 f 908.0 90.0   8 31.8 0.0992 701.0, 1000.0 -1.42
B6.A-Chr6 m 1190.0 64.1   8 22.7 0.0539 1107.0, 1293.0 -0.15
B6.A-Chr7 f 978.0 46.9   8 16.6 0.048 911.0, 1042.0 -0.66
B6.A-Chr7 m 1064.0 67.1   8 23.7 0.0631 958.0, 1147.0 -1.92
B6.A-Chr8 f 1003.0 61.2   8 21.6 0.061 929.0, 1095.0 -0.38
B6.A-Chr8 m 1250.0 51.0   12 14.7 0.0408 1156.0, 1343.0 0.7
B6.A-Chr9 f 1125.0 96.3   8 34.1 0.0856 1000.0, 1320.0 0.95
B6.A-Chr9 m 1106.0 81.4   8 28.8 0.0736 1020.0, 1262.0 -1.33
B6.A-ChrX f 1011.0 67.3   8 23.8 0.0666 937.0, 1130.0 -0.3
B6.A-ChrX m 1228.0 103.0   8 36.5 0.084 1058.0, 1352.0 0.39
B6.A-ChrY f 996.0 132.0   7 50.0 0.133 711.0, 1099.0 -0.46
B6.A-ChrY m 1154.0 96.7   8 34.2 0.0838 1045.0, 1344.0 -0.65
C57BL/6J f 1183.0 63.2   8 22.4 0.0535 1043.0, 1248.0 1.59
C57BL/6J m 1200.0 80.5   8 28.5 0.0671 1087.0, 1294.0 0.0


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J f 1196.375 40.0769 1275.2216 1117.5284
A/J m 1175.375 40.0769 1254.2216 1096.5284
B6.A-Chr1 f 999.5 40.0769 1078.3466 920.6534
B6.A-Chr1 m 1087.375 40.0769 1166.2216 1008.5284
B6.A-Chr10 f 1057.5714 42.844 1141.862 973.2808
B6.A-Chr10 m 1276.375 40.0769 1355.2216 1197.5284
B6.A-Chr11 f 951.0 40.0769 1029.8466 872.1534
B6.A-Chr11 m 1222.625 40.0769 1301.4716 1143.7784
B6.A-Chr12 f 832.75 40.0769 911.5966 753.9034
B6.A-Chr12 m 1135.5 40.0769 1214.3466 1056.6534
B6.A-Chr13 f 1018.375 40.0769 1097.2216 939.5284
B6.A-Chr13 m 1160.875 40.0769 1239.7216 1082.0284
B6.A-Chr14 f 1017.25 40.0769 1096.0966 938.4034
B6.A-Chr14 m 1288.25 40.0769 1367.0966 1209.4034
B6.A-Chr15 f 938.7778 37.7849 1013.1151 864.4405
B6.A-Chr15 m 1095.1429 42.844 1179.4334 1010.8523
B6.A-Chr16 f 1002.0 40.0769 1080.8466 923.1534
B6.A-Chr16 m 1208.25 40.0769 1287.0966 1129.4034
B6.A-Chr17 f 1113.0 40.0769 1191.8466 1034.1534
B6.A-Chr17 m 1281.25 40.0769 1360.0966 1202.4034
B6.A-Chr18 f 981.0 40.0769 1059.8466 902.1534
B6.A-Chr18 m 1294.0 40.0769 1372.8466 1215.1534
B6.A-Chr19 f 1073.375 40.0769 1152.2216 994.5284
B6.A-Chr19 m 1168.2857 42.844 1252.5763 1083.9951
B6.A-Chr2 f 1135.5714 42.844 1219.862 1051.2808
B6.A-Chr2 m 1262.625 40.0769 1341.4716 1183.7784
B6.A-Chr3 f 1135.125 40.0769 1213.9716 1056.2784
B6.A-Chr3 m 1291.875 40.0769 1370.7216 1213.0284
B6.A-Chr4 f 1148.75 40.0769 1227.5966 1069.9034
B6.A-Chr4 m 1268.1429 42.844 1352.4334 1183.8523
B6.A-Chr5 f 1067.75 40.0769 1146.5966 988.9034
B6.A-Chr5 m 1200.125 40.0769 1278.9716 1121.2784
B6.A-Chr6 f 907.75 40.0769 986.5966 828.9034
B6.A-Chr6 m 1190.125 40.0769 1268.9716 1111.2784
B6.A-Chr7 f 978.0 40.0769 1056.8466 899.1534
B6.A-Chr7 m 1064.0 40.0769 1142.8466 985.1534
B6.A-Chr8 f 1003.25 40.0769 1082.0966 924.4034
B6.A-Chr8 m 1249.5 32.7227 1313.878 1185.122
B6.A-Chr9 f 1124.625 40.0769 1203.4716 1045.7784
B6.A-Chr9 m 1105.75 40.0769 1184.5966 1026.9034
B6.A-ChrX f 1010.625 40.0769 1089.4716 931.7784
B6.A-ChrX m 1228.5 40.0769 1307.3466 1149.6534
B6.A-ChrY f 996.0 42.844 1080.2906 911.7094
B6.A-ChrY m 1153.875 40.0769 1232.7216 1075.0284
C57BL/6J f 1182.625 40.0769 1261.4716 1103.7784
C57BL/6J m 1200.0 40.0769 1278.8466 1121.1534


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
A/J both 1185.875 28.3387 1241.628 1130.122
B6.A-Chr1 both 1043.4375 28.3387 1099.1905 987.6845
B6.A-Chr10 both 1166.9732 29.3333 1224.683 1109.2634
B6.A-Chr11 both 1086.8125 28.3387 1142.5655 1031.0595
B6.A-Chr12 both 984.125 28.3387 1039.878 928.372
B6.A-Chr13 both 1089.625 28.3387 1145.378 1033.872
B6.A-Chr14 both 1152.75 28.3387 1208.503 1096.997
B6.A-Chr15 both 1016.9603 28.5627 1073.154 960.7666
B6.A-Chr16 both 1105.125 28.3387 1160.878 1049.372
B6.A-Chr17 both 1197.125 28.3387 1252.878 1141.372
B6.A-Chr18 both 1137.5 28.3387 1193.253 1081.747
B6.A-Chr19 both 1120.8304 29.3333 1178.5402 1063.1205
B6.A-Chr2 both 1199.0982 29.3333 1256.808 1141.3884
B6.A-Chr3 both 1213.5 28.3387 1269.253 1157.747
B6.A-Chr4 both 1208.4464 29.3333 1266.1562 1150.7366
B6.A-Chr5 both 1133.9375 28.3387 1189.6905 1078.1845
B6.A-Chr6 both 1048.9375 28.3387 1104.6905 993.1845
B6.A-Chr7 both 1021.0 28.3387 1076.753 965.247
B6.A-Chr8 both 1126.375 25.8695 1177.2703 1075.4797
B6.A-Chr9 both 1115.1875 28.3387 1170.9405 1059.4345
B6.A-ChrX both 1119.5625 28.3387 1175.3155 1063.8095
B6.A-ChrY both 1074.9375 29.3333 1132.6473 1017.2277
C57BL/6J both 1191.3125 28.3387 1247.0655 1135.5595




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA