Project measure / variable:   Lake1   CHCM

ID, description, units MPD:19916   CHCM   RBC corpuscular hemoglobin concentration mean (CHCM)   [g/dL]  
Data set, strains Lake1   B6.A consomic w/par   23 strains     sex: both     age: 7wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Lake1 - RBC corpuscular hemoglobin concentration mean (CHCM)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested23 strains23 strains
Mean of the strain means33.1   g/dL 32.7   g/dL
Median of the strain means33.3   g/dL 32.8   g/dL
SD of the strain means± 0.777 ± 0.911
Coefficient of variation (CV)0.0235 0.0278
Min–max range of strain means30.7   –   34.1   g/dL 30.6   –   34.5   g/dL
Mean sample size per strain7.9   mice 7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 14.8175 14.8175 42.4449 < 0.0001
strain 22 214.4152 9.7461 27.9179 < 0.0001
sex:strain 22 36.7799 1.6718 4.7889 < 0.0001
Residuals 321 112.0613 0.3491


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 33.0 0.372   8 0.132 0.0113 32.2, 33.3 -0.19
A/J m 32.5 0.498   8 0.176 0.0153 31.3, 32.8 -0.25
B6.A-Chr1 f 33.2 0.288   8 0.102 0.00867 32.8, 33.7 0.07
B6.A-Chr1 m 33.2 0.428   8 0.151 0.0129 32.6, 33.7 0.52
B6.A-Chr10 f 33.5 1.06   7 0.401 0.0317 32.5, 35.1 0.45
B6.A-Chr10 m 33.0 0.529   8 0.187 0.016 32.4, 33.7 0.3
B6.A-Chr11 f 33.5 0.288   8 0.102 0.00858 33.1, 33.9 0.45
B6.A-Chr11 m 32.2 0.434   8 0.153 0.0135 31.4, 32.7 -0.58
B6.A-Chr12 f 33.5 0.518   8 0.183 0.0155 32.9, 34.3 0.45
B6.A-Chr12 m 32.4 0.314   8 0.111 0.00968 32.1, 32.9 -0.36
B6.A-Chr13 f 32.1 0.657   8 0.232 0.0205 31.1, 33.1 -1.35
B6.A-Chr13 m 31.6 0.518   8 0.183 0.0164 30.9, 32.4 -1.24
B6.A-Chr14 f 33.4 0.596   8 0.211 0.0179 32.2, 34.0 0.32
B6.A-Chr14 m 32.5 0.26   8 0.0921 0.00801 32.2, 32.8 -0.25
B6.A-Chr15 f 33.9 0.291   9 0.0969 0.00858 33.5, 34.5 0.97
B6.A-Chr15 m 33.2 0.31   7 0.117 0.00933 32.7, 33.7 0.52
B6.A-Chr16 f 34.0 0.273   8 0.0964 0.008 33.8, 34.4 1.1
B6.A-Chr16 m 33.3 0.431   8 0.152 0.0129 32.6, 33.8 0.63
B6.A-Chr17 f 33.5 0.531   8 0.188 0.0159 32.3, 34.1 0.45
B6.A-Chr17 m 33.7 0.843   8 0.298 0.025 32.7, 34.8 1.06
B6.A-Chr18 f 33.0 0.328   8 0.116 0.00994 32.5, 33.4 -0.19
B6.A-Chr18 m 32.6 0.409   8 0.144 0.0125 31.9, 33.1 -0.14
B6.A-Chr19 f 33.7 1.1   8 0.388 0.0325 32.4, 34.8 0.71
B6.A-Chr19 m 32.8 1.49   7 0.564 0.0454 31.3, 34.8 0.08
B6.A-Chr2 f 33.1 0.229   7 0.0865 0.00692 32.8, 33.5 -0.06
B6.A-Chr2 m 32.9 0.32   8 0.113 0.00971 32.4, 33.5 0.19
B6.A-Chr3 f 32.7 0.813   8 0.288 0.0249 31.5, 33.7 -0.58
B6.A-Chr3 m 33.1 0.354   8 0.125 0.0107 32.5, 33.6 0.41
B6.A-Chr4 f 33.2 0.648   8 0.229 0.0195 31.8, 33.8 0.07
B6.A-Chr4 m 31.6 0.559   7 0.211 0.0177 30.8, 32.2 -1.24
B6.A-Chr5 f 33.3 0.37   8 0.131 0.0111 32.8, 33.9 0.2
B6.A-Chr5 m 32.5 0.752   8 0.266 0.0231 31.0, 33.3 -0.25
B6.A-Chr6 f 33.5 0.189   8 0.0666 0.00563 33.2, 33.8 0.45
B6.A-Chr6 m 33.5 0.874   8 0.309 0.0261 31.7, 34.3 0.84
B6.A-Chr7 f 34.1 0.833   8 0.295 0.0245 32.9, 35.0 1.22
B6.A-Chr7 m 34.4 0.191   8 0.0675 0.00555 34.1, 34.7 1.83
B6.A-Chr8 f 32.7 0.472   8 0.167 0.0144 32.1, 33.4 -0.58
B6.A-Chr8 m 33.2 0.579   12 0.167 0.0175 32.2, 34.1 0.52
B6.A-Chr9 f 33.8 0.487   8 0.172 0.0144 33.1, 34.5 0.84
B6.A-Chr9 m 34.5 0.966   8 0.342 0.028 32.3, 35.2 1.94
B6.A-ChrX f 31.7 0.475   8 0.168 0.015 31.2, 32.5 -1.86
B6.A-ChrX m 31.8 0.381   8 0.135 0.012 31.3, 32.5 -1.02
B6.A-ChrY f 33.3 0.611   7 0.231 0.0183 32.6, 34.2 0.2
B6.A-ChrY m 31.7 0.925   8 0.327 0.0292 30.4, 32.7 -1.13
C57BL/6J f 30.7 0.307   8 0.108 0.00998 30.2, 31.3 -3.15
C57BL/6J m 30.6 0.35   8 0.124 0.0114 29.9, 31.0 -2.34


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J f 33.0125 0.2089 33.4235 32.6015
A/J m 32.475 0.2089 32.886 32.064
B6.A-Chr1 f 33.2 0.2089 33.611 32.789
B6.A-Chr1 m 33.2 0.2089 33.611 32.789
B6.A-Chr10 f 33.5 0.2233 33.9394 33.0606
B6.A-Chr10 m 33.0 0.2089 33.411 32.589
B6.A-Chr11 f 33.55 0.2089 33.961 33.139
B6.A-Chr11 m 32.1625 0.2089 32.5735 31.7515
B6.A-Chr12 f 33.475 0.2089 33.886 33.064
B6.A-Chr12 m 32.4125 0.2089 32.8235 32.0015
B6.A-Chr13 f 32.0625 0.2089 32.4735 31.6515
B6.A-Chr13 m 31.5625 0.2089 31.9735 31.1515
B6.A-Chr14 f 33.3875 0.2089 33.7985 32.9765
B6.A-Chr14 m 32.525 0.2089 32.936 32.114
B6.A-Chr15 f 33.8778 0.1969 34.2653 33.4903
B6.A-Chr15 m 33.2429 0.2233 33.6822 32.8035
B6.A-Chr16 f 34.05 0.2089 34.461 33.639
B6.A-Chr16 m 33.3375 0.2089 33.7485 32.9265
B6.A-Chr17 f 33.475 0.2089 33.886 33.064
B6.A-Chr17 m 33.7125 0.2089 34.1235 33.3015
B6.A-Chr18 f 33.025 0.2089 33.436 32.614
B6.A-Chr18 m 32.6125 0.2089 33.0235 32.2015
B6.A-Chr19 f 33.6875 0.2089 34.0985 33.2765
B6.A-Chr19 m 32.8429 0.2233 33.2822 32.4035
B6.A-Chr2 f 33.0714 0.2233 33.5108 32.6321
B6.A-Chr2 m 32.925 0.2089 33.336 32.514
B6.A-Chr3 f 32.6875 0.2089 33.0985 32.2765
B6.A-Chr3 m 33.075 0.2089 33.486 32.664
B6.A-Chr4 f 33.1625 0.2089 33.5735 32.7515
B6.A-Chr4 m 31.5714 0.2233 32.0108 31.1321
B6.A-Chr5 f 33.35 0.2089 33.761 32.939
B6.A-Chr5 m 32.5 0.2089 32.911 32.089
B6.A-Chr6 f 33.4875 0.2089 33.8985 33.0765
B6.A-Chr6 m 33.4875 0.2089 33.8985 33.0765
B6.A-Chr7 f 34.0625 0.2089 34.4735 33.6515
B6.A-Chr7 m 34.375 0.2089 34.786 33.964
B6.A-Chr8 f 32.7 0.2089 33.111 32.289
B6.A-Chr8 m 33.1667 0.1706 33.5022 32.8311
B6.A-Chr9 f 33.8375 0.2089 34.2485 33.4265
B6.A-Chr9 m 34.525 0.2089 34.936 34.114
B6.A-ChrX f 31.7 0.2089 32.111 31.289
B6.A-ChrX m 31.8375 0.2089 32.2485 31.4265
B6.A-ChrY f 33.3 0.2233 33.7394 32.8606
B6.A-ChrY m 31.725 0.2089 32.136 31.314
C57BL/6J f 30.7375 0.2089 31.1485 30.3265
C57BL/6J m 30.6375 0.2089 31.0485 30.2265


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
A/J both 32.7437 0.1477 33.0344 32.4531
B6.A-Chr1 both 33.2 0.1477 33.4906 32.9094
B6.A-Chr10 both 33.25 0.1529 33.5508 32.9492
B6.A-Chr11 both 32.8562 0.1477 33.1469 32.5656
B6.A-Chr12 both 32.9437 0.1477 33.2344 32.6531
B6.A-Chr13 both 31.8125 0.1477 32.1031 31.5219
B6.A-Chr14 both 32.9562 0.1477 33.2469 32.6656
B6.A-Chr15 both 33.5603 0.1489 33.8532 33.2674
B6.A-Chr16 both 33.6937 0.1477 33.9844 33.4031
B6.A-Chr17 both 33.5937 0.1477 33.8844 33.3031
B6.A-Chr18 both 32.8187 0.1477 33.1094 32.5281
B6.A-Chr19 both 33.2652 0.1529 33.566 32.9644
B6.A-Chr2 both 32.9982 0.1529 33.299 32.6974
B6.A-Chr3 both 32.8812 0.1477 33.1719 32.5906
B6.A-Chr4 both 32.367 0.1529 32.6678 32.0662
B6.A-Chr5 both 32.925 0.1477 33.2156 32.6344
B6.A-Chr6 both 33.4875 0.1477 33.7781 33.1969
B6.A-Chr7 both 34.2187 0.1477 34.5094 33.9281
B6.A-Chr8 both 32.9333 0.1348 33.1986 32.668
B6.A-Chr9 both 34.1812 0.1477 34.4719 33.8906
B6.A-ChrX both 31.7687 0.1477 32.0594 31.4781
B6.A-ChrY both 32.5125 0.1529 32.8133 32.2117
C57BL/6J both 30.6875 0.1477 30.9781 30.3969




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA