Project measure / variable:   Lake1   mHGB

ID, description, units MPD:19910   mHGB   measured hemoglobin (HGB)   [g/dL]  
Data set, strains Lake1   B6.A consomic w/par   23 strains     sex: both     age: 7wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Lake1 - measured hemoglobin (HGB)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested23 strains23 strains
Mean of the strain means14.1   g/dL 14.2   g/dL
Median of the strain means14.2   g/dL 14.1   g/dL
SD of the strain means± 0.430 ± 0.386
Coefficient of variation (CV)0.0304 0.0271
Min–max range of strain means13.1   –   14.8   g/dL 13.5   –   15.2   g/dL
Mean sample size per strain7.9   mice 7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.5421 0.5421 0.9053 0.3421
strain 22 39.3434 1.7883 2.9865 < 0.0001
sex:strain 22 17.7336 0.8061 1.3462 0.1393
Residuals 321 192.2145 0.5988


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 13.5 1.42   8 0.504 0.106 10.1, 14.6 -1.47
A/J m 14.1 0.267   8 0.0945 0.019 13.8, 14.6 -0.27
B6.A-Chr1 f 13.9 0.55   8 0.195 0.0397 12.9, 14.4 -0.54
B6.A-Chr1 m 14.0 0.689   8 0.243 0.0494 13.0, 14.8 -0.53
B6.A-Chr10 f 14.7 0.208   7 0.0787 0.0142 14.4, 15.1 1.32
B6.A-Chr10 m 14.1 0.493   8 0.174 0.0348 13.1, 14.6 -0.27
B6.A-Chr11 f 14.4 0.745   8 0.263 0.0517 13.7, 15.6 0.63
B6.A-Chr11 m 13.9 1.04   8 0.369 0.0754 11.5, 15.0 -0.79
B6.A-Chr12 f 14.3 0.573   8 0.203 0.0401 13.6, 15.2 0.39
B6.A-Chr12 m 14.1 0.694   8 0.245 0.0492 13.2, 15.2 -0.27
B6.A-Chr13 f 14.2 0.924   8 0.327 0.0652 12.1, 15.0 0.16
B6.A-Chr13 m 14.1 0.705   8 0.249 0.0498 13.3, 15.0 -0.27
B6.A-Chr14 f 14.1 0.511   8 0.181 0.0362 13.5, 14.8 -0.07
B6.A-Chr14 m 13.9 0.965   8 0.341 0.0695 11.6, 14.5 -0.79
B6.A-Chr15 f 13.1 2.9   9 0.966 0.222 5.4, 14.6 -2.4
B6.A-Chr15 m 14.1 0.547   7 0.207 0.0389 13.1, 14.6 -0.27
B6.A-Chr16 f 14.2 0.297   8 0.105 0.021 13.8, 14.7 0.16
B6.A-Chr16 m 14.8 0.45   8 0.159 0.0305 14.1, 15.4 1.55
B6.A-Chr17 f 14.2 0.278   8 0.0982 0.0195 13.9, 14.7 0.16
B6.A-Chr17 m 14.2 0.488   8 0.173 0.0344 13.6, 14.9 -0.01
B6.A-Chr18 f 14.4 0.391   8 0.138 0.0271 13.9, 15.0 0.63
B6.A-Chr18 m 14.1 0.406   8 0.144 0.0288 13.7, 15.0 -0.27
B6.A-Chr19 f 14.8 0.641   8 0.227 0.0434 13.9, 15.7 1.56
B6.A-Chr19 m 14.9 0.62   7 0.234 0.0417 14.3, 16.0 1.8
B6.A-Chr2 f 13.4 0.258   7 0.0976 0.0193 13.1, 13.8 -1.7
B6.A-Chr2 m 13.7 0.288   8 0.102 0.0209 13.2, 14.0 -1.31
B6.A-Chr3 f 13.8 0.809   8 0.286 0.0584 12.5, 14.7 -0.77
B6.A-Chr3 m 14.3 0.354   8 0.125 0.0247 13.9, 14.8 0.25
B6.A-Chr4 f 13.9 0.538   8 0.19 0.0387 13.1, 14.8 -0.54
B6.A-Chr4 m 14.3 0.478   7 0.181 0.0334 13.7, 14.9 0.25
B6.A-Chr5 f 13.9 0.74   8 0.262 0.0533 12.7, 15.0 -0.54
B6.A-Chr5 m 13.8 0.621   8 0.22 0.0448 13.1, 15.0 -1.05
B6.A-Chr6 f 14.6 0.311   8 0.11 0.0213 14.1, 15.0 1.09
B6.A-Chr6 m 13.5 1.23   8 0.435 0.091 11.5, 14.6 -1.83
B6.A-Chr7 f 14.8 0.372   8 0.132 0.0252 14.3, 15.3 1.56
B6.A-Chr7 m 15.2 0.426   8 0.151 0.028 14.4, 15.7 2.58
B6.A-Chr8 f 14.1 0.394   8 0.139 0.0279 13.4, 14.6 -0.07
B6.A-Chr8 m 14.0 0.591   12 0.17 0.0421 13.3, 15.5 -0.53
B6.A-Chr9 f 14.2 0.64   8 0.226 0.045 13.1, 15.3 0.16
B6.A-Chr9 m 14.3 0.28   8 0.099 0.0196 13.9, 14.7 0.25
B6.A-ChrX f 14.5 0.574   8 0.203 0.0396 13.7, 15.4 0.86
B6.A-ChrX m 14.4 0.597   8 0.211 0.0414 13.4, 15.2 0.51
B6.A-ChrY f 14.0 0.883   7 0.334 0.0631 12.2, 14.7 -0.3
B6.A-ChrY m 14.4 0.539   8 0.191 0.0375 13.9, 15.6 0.51
C57BL/6J f 14.0 0.524   8 0.185 0.0373 13.1, 14.8 -0.3
C57BL/6J m 14.5 0.626   8 0.221 0.043 13.6, 15.6 0.77


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J f 13.5 0.2736 14.0383 12.9617
A/J m 14.1 0.2736 14.6383 13.5617
B6.A-Chr1 f 13.8625 0.2736 14.4008 13.3242
B6.A-Chr1 m 13.95 0.2736 14.4883 13.4117
B6.A-Chr10 f 14.7 0.2925 15.2754 14.1246
B6.A-Chr10 m 14.1375 0.2736 14.6758 13.5992
B6.A-Chr11 f 14.4 0.2736 14.9383 13.8617
B6.A-Chr11 m 13.85 0.2736 14.3883 13.3117
B6.A-Chr12 f 14.3 0.2736 14.8383 13.7617
B6.A-Chr12 m 14.125 0.2736 14.6633 13.5867
B6.A-Chr13 f 14.175 0.2736 14.7133 13.6367
B6.A-Chr13 m 14.15 0.2736 14.6883 13.6117
B6.A-Chr14 f 14.1125 0.2736 14.6508 13.5742
B6.A-Chr14 m 13.875 0.2736 14.4133 13.3367
B6.A-Chr15 f 13.0889 0.2579 13.5964 12.5814
B6.A-Chr15 m 14.0714 0.2925 14.6468 13.496
B6.A-Chr16 f 14.1625 0.2736 14.7008 13.6242
B6.A-Chr16 m 14.7625 0.2736 15.3008 14.2242
B6.A-Chr17 f 14.25 0.2736 14.7883 13.7117
B6.A-Chr17 m 14.2125 0.2736 14.7508 13.6742
B6.A-Chr18 f 14.4125 0.2736 14.9508 13.8742
B6.A-Chr18 m 14.125 0.2736 14.6633 13.5867
B6.A-Chr19 f 14.775 0.2736 15.3133 14.2367
B6.A-Chr19 m 14.8857 0.2925 15.4611 14.3103
B6.A-Chr2 f 13.4 0.2925 13.9754 12.8246
B6.A-Chr2 m 13.7375 0.2736 14.2758 13.1992
B6.A-Chr3 f 13.85 0.2736 14.3883 13.3117
B6.A-Chr3 m 14.3375 0.2736 14.8758 13.7992
B6.A-Chr4 f 13.9125 0.2736 14.4508 13.3742
B6.A-Chr4 m 14.2857 0.2925 14.8611 13.7103
B6.A-Chr5 f 13.875 0.2736 14.4133 13.3367
B6.A-Chr5 m 13.85 0.2736 14.3883 13.3117
B6.A-Chr6 f 14.575 0.2736 15.1133 14.0367
B6.A-Chr6 m 13.5375 0.2736 14.0758 12.9992
B6.A-Chr7 f 14.7875 0.2736 15.3258 14.2492
B6.A-Chr7 m 15.1875 0.2736 15.7258 14.6492
B6.A-Chr8 f 14.1125 0.2736 14.6508 13.5742
B6.A-Chr8 m 14.0167 0.2234 14.4561 13.5772
B6.A-Chr9 f 14.2125 0.2736 14.7508 13.6742
B6.A-Chr9 m 14.2875 0.2736 14.8258 13.7492
B6.A-ChrX f 14.4875 0.2736 15.0258 13.9492
B6.A-ChrX m 14.4375 0.2736 14.9758 13.8992
B6.A-ChrY f 14.0 0.2925 14.5754 13.4246
B6.A-ChrY m 14.375 0.2736 14.9133 13.8367
C57BL/6J f 14.05 0.2736 14.5883 13.5117
C57BL/6J m 14.55 0.2736 15.0883 14.0117


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
A/J both 13.8 0.1935 14.1806 13.4194
B6.A-Chr1 both 13.9063 0.1935 14.2869 13.5256
B6.A-Chr10 both 14.4187 0.2002 14.8127 14.0248
B6.A-Chr11 both 14.125 0.1935 14.5056 13.7444
B6.A-Chr12 both 14.2125 0.1935 14.5931 13.8319
B6.A-Chr13 both 14.1625 0.1935 14.5431 13.7819
B6.A-Chr14 both 13.9938 0.1935 14.3744 13.6131
B6.A-Chr15 both 13.5802 0.195 13.9638 13.1965
B6.A-Chr16 both 14.4625 0.1935 14.8431 14.0819
B6.A-Chr17 both 14.2313 0.1935 14.6119 13.8506
B6.A-Chr18 both 14.2688 0.1935 14.6494 13.8881
B6.A-Chr19 both 14.8304 0.2002 15.2243 14.4364
B6.A-Chr2 both 13.5688 0.2002 13.9627 13.1748
B6.A-Chr3 both 14.0938 0.1935 14.4744 13.7131
B6.A-Chr4 both 14.0991 0.2002 14.4931 13.7051
B6.A-Chr5 both 13.8625 0.1935 14.2431 13.4819
B6.A-Chr6 both 14.0563 0.1935 14.4369 13.6756
B6.A-Chr7 both 14.9875 0.1935 15.3681 14.6069
B6.A-Chr8 both 14.0646 0.1766 14.412 13.7171
B6.A-Chr9 both 14.25 0.1935 14.6306 13.8694
B6.A-ChrX both 14.4625 0.1935 14.8431 14.0819
B6.A-ChrY both 14.1875 0.2002 14.5815 13.7935
C57BL/6J both 14.3 0.1935 14.6806 13.9194




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA