Phenotype measure:   Lake1   pct_LUC

ID, description, units MPD:19907   pct_LUC   large unstained cell differential (LUC; percentage of total WBC)   [%]
Data set, strains Lake1   B6.A consomic w/par   23 strains     sex: both     age: 7wks
Procedure complete blood count
Ontology mappings

  STRAIN COMPARISON PLOT
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Lake1 - large unstained cell differential (LUC; percentage of total WBC)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested23 strains23 strains
Mean of the strain means1.13   % 1.53   %
Median of the strain means1.18   % 1.65   %
SD of the strain means± 0.512 ± 0.588
Coefficient of variation (CV)0.455 0.384
Min–max range of strain means0.412   –   2.41   % 0.412   –   2.61   %
Mean sample size per strain7.9   mice 7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 15.3291 15.3291 40.3286 < 0.0001
strain 22 64.7618 2.9437 7.7445 < 0.0001
sex:strain 22 40.7195 1.8509 4.8694 < 0.0001
Residuals 321 122.0137 0.3801


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 0.438 0.106   8 0.0375 0.242 0.3, 0.6 -1.34
A/J m 0.412 0.0641   8 0.0227 0.155 0.3, 0.5 -1.9
B6.A-Chr1 f 1.7 0.775   8 0.274 0.456 0.6, 2.9 1.12
B6.A-Chr1 m 1.53 0.403   8 0.142 0.264 0.9, 2.0 0.0
B6.A-Chr10 f 0.7 0.265   7 0.1 0.378 0.4, 1.2 -0.83
B6.A-Chr10 m 1.8 0.411   8 0.145 0.228 1.2, 2.4 0.46
B6.A-Chr11 f 1.52 0.301   8 0.106 0.198 1.1, 2.1 0.77
B6.A-Chr11 m 1.71 0.949   8 0.336 0.554 0.7, 3.2 0.3
B6.A-Chr12 f 1.54 0.529   8 0.187 0.344 1.0, 2.7 0.81
B6.A-Chr12 m 2.61 0.799   8 0.282 0.306 1.8, 4.2 1.83
B6.A-Chr13 f 0.775 0.205   8 0.0726 0.265 0.4, 1.0 -0.69
B6.A-Chr13 m 1.54 0.362   8 0.128 0.236 1.0, 2.0 0.02
B6.A-Chr14 f 1.18 0.198   8 0.0701 0.169 1.0, 1.6 0.1
B6.A-Chr14 m 1.71 0.894   8 0.316 0.522 0.8, 3.2 0.3
B6.A-Chr15 f 1.46 0.194   9 0.0648 0.134 1.1, 1.7 0.65
B6.A-Chr15 m 2.36 1.17   7 0.443 0.497 1.1, 4.2 1.41
B6.A-Chr16 f 0.412 0.0991   8 0.035 0.24 0.3, 0.6 -1.4
B6.A-Chr16 m 0.962 0.609   8 0.215 0.633 0.4, 1.8 -0.97
B6.A-Chr17 f 1.26 0.302   8 0.107 0.239 1.0, 1.9 0.26
B6.A-Chr17 m 1.45 1.05   8 0.371 0.723 0.5, 3.2 -0.14
B6.A-Chr18 f 0.725 0.139   8 0.0491 0.192 0.6, 1.0 -0.78
B6.A-Chr18 m 2.33 0.565   8 0.2 0.243 1.6, 3.3 1.36
B6.A-Chr19 f 0.7 0.193   8 0.0681 0.275 0.4, 1.0 -0.83
B6.A-Chr19 m 0.929 0.509   7 0.192 0.548 0.5, 2.0 -1.02
B6.A-Chr2 f 1.57 0.668   7 0.252 0.425 0.5, 2.3 0.87
B6.A-Chr2 m 2.15 0.478   8 0.169 0.222 1.3, 2.7 1.05
B6.A-Chr3 f 1.44 0.542   8 0.192 0.377 0.6, 2.2 0.61
B6.A-Chr3 m 0.725 0.225   8 0.0796 0.311 0.5, 1.0 -1.37
B6.A-Chr4 f 0.512 0.23   8 0.0811 0.448 0.3, 1.0 -1.2
B6.A-Chr4 m 0.971 0.25   7 0.0944 0.257 0.7, 1.4 -0.95
B6.A-Chr5 f 1.2 0.775   8 0.274 0.645 0.3, 2.5 0.14
B6.A-Chr5 m 1.8 0.95   8 0.336 0.528 0.6, 3.3 0.46
B6.A-Chr6 f 0.487 0.125   8 0.0441 0.256 0.4, 0.7 -1.25
B6.A-Chr6 m 2.12 0.358   8 0.126 0.168 1.5, 2.7 1.0
B6.A-Chr7 f 1.62 1.11   8 0.394 0.686 0.6, 3.3 0.96
B6.A-Chr7 m 0.5 0.107   8 0.0378 0.214 0.4, 0.7 -1.75
B6.A-Chr8 f 0.763 0.267   8 0.0944 0.35 0.5, 1.1 -0.71
B6.A-Chr8 m 1.66 0.902   12 0.26 0.544 0.5, 3.3 0.22
B6.A-Chr9 f 2.41 1.08   8 0.381 0.447 0.7, 4.1 2.51
B6.A-Chr9 m 1.75 0.501   8 0.177 0.287 0.7, 2.4 0.37
B6.A-ChrX f 0.825 0.198   8 0.0701 0.24 0.6, 1.2 -0.59
B6.A-ChrX m 1.31 0.669   8 0.236 0.509 0.6, 2.4 -0.38
B6.A-ChrY f 1.51 0.449   7 0.17 0.296 0.9, 2.1 0.75
B6.A-ChrY m 1.65 1.21   8 0.428 0.734 0.7, 4.1 0.2
C57BL/6J f 1.16 1.08   8 0.383 0.932 0.6, 3.8 0.07
C57BL/6J m 1.23 0.292   8 0.103 0.238 0.9, 1.6 -0.51


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J f 0.4375 0.218 0.8663 0.0087
A/J m 0.4125 0.218 0.8413 0.0
B6.A-Chr1 f 1.7 0.218 2.1288 1.2712
B6.A-Chr1 m 1.525 0.218 1.9538 1.0962
B6.A-Chr10 f 0.7 0.233 1.1584 0.2416
B6.A-Chr10 m 1.8 0.218 2.2288 1.3712
B6.A-Chr11 f 1.525 0.218 1.9538 1.0962
B6.A-Chr11 m 1.7125 0.218 2.1413 1.2837
B6.A-Chr12 f 1.5375 0.218 1.9663 1.1087
B6.A-Chr12 m 2.6125 0.218 3.0413 2.1837
B6.A-Chr13 f 0.775 0.218 1.2038 0.3462
B6.A-Chr13 m 1.5375 0.218 1.9663 1.1087
B6.A-Chr14 f 1.175 0.218 1.6038 0.7462
B6.A-Chr14 m 1.7125 0.218 2.1413 1.2837
B6.A-Chr15 f 1.4556 0.2055 1.8599 1.0512
B6.A-Chr15 m 2.3571 0.233 2.8156 1.8987
B6.A-Chr16 f 0.4125 0.218 0.8413 0.0
B6.A-Chr16 m 0.9625 0.218 1.3913 0.5337
B6.A-Chr17 f 1.2625 0.218 1.6913 0.8337
B6.A-Chr17 m 1.45 0.218 1.8788 1.0212
B6.A-Chr18 f 0.725 0.218 1.1538 0.2962
B6.A-Chr18 m 2.325 0.218 2.7538 1.8962
B6.A-Chr19 f 0.7 0.218 1.1288 0.2712
B6.A-Chr19 m 0.9286 0.233 1.387 0.4701
B6.A-Chr2 f 1.5714 0.233 2.0299 1.113
B6.A-Chr2 m 2.15 0.218 2.5788 1.7212
B6.A-Chr3 f 1.4375 0.218 1.8663 1.0087
B6.A-Chr3 m 0.725 0.218 1.1538 0.2962
B6.A-Chr4 f 0.5125 0.218 0.9413 0.0837
B6.A-Chr4 m 0.9714 0.233 1.4299 0.513
B6.A-Chr5 f 1.2 0.218 1.6288 0.7712
B6.A-Chr5 m 1.8 0.218 2.2288 1.3712
B6.A-Chr6 f 0.4875 0.218 0.9163 0.0587
B6.A-Chr6 m 2.125 0.218 2.5538 1.6962
B6.A-Chr7 f 1.625 0.218 2.0538 1.1962
B6.A-Chr7 m 0.5 0.218 0.9288 0.0712
B6.A-Chr8 f 0.7625 0.218 1.1913 0.3337
B6.A-Chr8 m 1.6583 0.178 2.0085 1.3082
B6.A-Chr9 f 2.4125 0.218 2.8413 1.9837
B6.A-Chr9 m 1.75 0.218 2.1788 1.3212
B6.A-ChrX f 0.825 0.218 1.2538 0.3962
B6.A-ChrX m 1.3125 0.218 1.7413 0.8837
B6.A-ChrY f 1.5143 0.233 1.9727 1.0558
B6.A-ChrY m 1.65 0.218 2.0788 1.2212
C57BL/6J f 1.1625 0.218 1.5913 0.7337
C57BL/6J m 1.225 0.218 1.6538 0.7962


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
A/J both 0.425 0.1541 0.7282 0.1218
B6.A-Chr1 both 1.6125 0.1541 1.9157 1.3093
B6.A-Chr10 both 1.25 0.1595 1.5639 0.9361
B6.A-Chr11 both 1.6188 0.1541 1.922 1.3155
B6.A-Chr12 both 2.075 0.1541 2.3782 1.7718
B6.A-Chr13 both 1.1562 0.1541 1.4595 0.853
B6.A-Chr14 both 1.4438 0.1541 1.747 1.1405
B6.A-Chr15 both 1.9063 0.1554 2.212 1.6007
B6.A-Chr16 both 0.6875 0.1541 0.9907 0.3843
B6.A-Chr17 both 1.3563 0.1541 1.6595 1.053
B6.A-Chr18 both 1.525 0.1541 1.8282 1.2218
B6.A-Chr19 both 0.8143 0.1595 1.1282 0.5004
B6.A-Chr2 both 1.8607 0.1595 2.1746 1.5468
B6.A-Chr3 both 1.0812 0.1541 1.3845 0.778
B6.A-Chr4 both 0.742 0.1595 1.0558 0.4281
B6.A-Chr5 both 1.5 0.1541 1.8032 1.1968
B6.A-Chr6 both 1.3062 0.1541 1.6095 1.003
B6.A-Chr7 both 1.0625 0.1541 1.3657 0.7593
B6.A-Chr8 both 1.2104 0.1407 1.4872 0.9336
B6.A-Chr9 both 2.0813 0.1541 2.3845 1.778
B6.A-ChrX both 1.0687 0.1541 1.372 0.7655
B6.A-ChrY both 1.5821 0.1595 1.896 1.2683
C57BL/6J both 1.1938 0.1541 1.497 0.8905




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA