Phenotype measure:   Lake1   pct_LYM

ID, description, units MPD:19904   pct_LYM   lymphocyte differential (LYM; percentage of total WBC)   [%]
Data set, strains Lake1   B6.A consomic w/par   23 strains     sex: both     age: 7wks
Procedure complete blood count
Ontology mappings

  STRAIN COMPARISON PLOT
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Lake1 - lymphocyte differential (LYM; percentage of total WBC)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested23 strains23 strains
Mean of the strain means88.8   % 87.1   %
Median of the strain means89.3   % 87.5   %
SD of the strain means± 1.94 ± 2.33
Coefficient of variation (CV)0.0218 0.0267
Min–max range of strain means83.2   –   90.9   % 82.3   –   90.6   %
Mean sample size per strain7.9   mice 7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 236.0647 236.0647 37.59 < 0.0001
strain 22 1174.4246 53.3829 8.5005 < 0.0001
sex:strain 22 426.8346 19.4016 3.0894 < 0.0001
Residuals 321 2015.8745 6.28


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 83.2 3.61   8 1.28 0.0434 76.7, 86.9 -2.88
A/J m 83.4 2.23   8 0.787 0.0267 79.7, 85.7 -1.6
B6.A-Chr1 f 84.8 2.09   8 0.738 0.0246 81.5, 87.0 -2.06
B6.A-Chr1 m 84.8 1.44   8 0.51 0.017 82.5, 87.5 -1.0
B6.A-Chr10 f 88.3 1.77   7 0.668 0.02 85.0, 89.9 -0.26
B6.A-Chr10 m 88.4 1.92   8 0.681 0.0218 85.0, 90.7 0.55
B6.A-Chr11 f 89.3 0.891   8 0.315 0.00997 88.0, 90.2 0.26
B6.A-Chr11 m 87.4 1.62   8 0.573 0.0186 85.2, 89.5 0.12
B6.A-Chr12 f 89.5 2.2   8 0.778 0.0246 84.7, 92.3 0.36
B6.A-Chr12 m 85.2 2.6   8 0.92 0.0305 81.3, 88.8 -0.83
B6.A-Chr13 f 90.1 2.4   8 0.847 0.0266 84.9, 92.3 0.67
B6.A-Chr13 m 82.3 6.08   8 2.15 0.0739 72.4, 89.8 -2.07
B6.A-Chr14 f 90.1 1.37   8 0.485 0.0152 87.9, 92.1 0.67
B6.A-Chr14 m 89.6 1.67   8 0.591 0.0187 87.0, 92.0 1.06
B6.A-Chr15 f 89.3 1.3   9 0.435 0.0146 87.3, 90.9 0.26
B6.A-Chr15 m 85.3 3.11   7 1.17 0.0364 81.7, 88.8 -0.78
B6.A-Chr16 f 89.3 1.32   8 0.467 0.0148 87.3, 91.6 0.26
B6.A-Chr16 m 89.6 1.99   8 0.704 0.0222 85.7, 92.6 1.06
B6.A-Chr17 f 90.4 1.48   8 0.522 0.0163 87.6, 92.5 0.83
B6.A-Chr17 m 86.2 1.98   8 0.699 0.0229 84.2, 90.6 -0.4
B6.A-Chr18 f 90.3 1.45   8 0.514 0.0161 88.0, 92.7 0.78
B6.A-Chr18 m 88.1 1.71   8 0.603 0.0194 85.7, 90.5 0.42
B6.A-Chr19 f 90.9 0.651   8 0.23 0.00716 89.9, 91.7 1.08
B6.A-Chr19 m 88.7 1.52   7 0.573 0.0171 86.6, 90.3 0.68
B6.A-Chr2 f 89.3 1.38   7 0.523 0.0155 87.9, 91.2 0.26
B6.A-Chr2 m 86.4 1.88   8 0.665 0.0217 83.9, 89.2 -0.31
B6.A-Chr3 f 88.8 2.3   8 0.815 0.0259 83.6, 90.9 0.0
B6.A-Chr3 m 87.5 3.1   8 1.09 0.0354 81.3, 90.6 0.16
B6.A-Chr4 f 86.7 1.8   8 0.637 0.0208 84.4, 90.3 -1.08
B6.A-Chr4 m 83.2 5.18   7 1.96 0.0622 73.1, 87.4 -1.68
B6.A-Chr5 f 87.9 3.37   8 1.19 0.0383 82.6, 91.9 -0.46
B6.A-Chr5 m 89.3 1.32   8 0.465 0.0147 87.6, 91.5 0.93
B6.A-Chr6 f 86.5 1.79   8 0.632 0.0207 83.5, 88.8 -1.18
B6.A-Chr6 m 85.9 4.66   8 1.65 0.0542 77.3, 89.7 -0.53
B6.A-Chr7 f 89.4 1.49   8 0.526 0.0166 86.7, 90.8 0.31
B6.A-Chr7 m 86.2 3.51   8 1.24 0.0407 79.1, 90.3 -0.4
B6.A-Chr8 f 90.7 1.96   8 0.693 0.0216 86.5, 92.8 0.98
B6.A-Chr8 m 88.4 2.61   12 0.753 0.0295 84.0, 91.3 0.55
B6.A-Chr9 f 87.8 2.43   8 0.86 0.0277 84.2, 91.0 -0.51
B6.A-Chr9 m 89.8 2.76   8 0.977 0.0308 87.2, 95.9 1.15
B6.A-ChrX f 89.9 1.71   8 0.606 0.019 86.2, 91.5 0.57
B6.A-ChrX m 89.8 2.07   8 0.733 0.0231 85.9, 91.7 1.15
B6.A-ChrY f 90.9 1.36   7 0.513 0.0149 88.2, 92.2 1.08
B6.A-ChrY m 90.6 1.99   8 0.704 0.022 87.5, 93.4 1.49
C57BL/6J f 88.9 4.78   8 1.69 0.0538 77.4, 92.1 0.05
C57BL/6J m 87.8 1.69   8 0.599 0.0193 84.8, 89.6 0.29


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J f 83.1875 0.886 84.9306 81.4444
A/J m 83.4125 0.886 85.1556 81.6694
B6.A-Chr1 f 84.8 0.886 86.5431 83.0569
B6.A-Chr1 m 84.775 0.886 86.5181 83.0319
B6.A-Chr10 f 88.3143 0.9472 90.1777 86.4508
B6.A-Chr10 m 88.4375 0.886 90.1806 86.6944
B6.A-Chr11 f 89.325 0.886 91.0681 87.5819
B6.A-Chr11 m 87.3875 0.886 89.1306 85.6444
B6.A-Chr12 f 89.45 0.886 91.1931 87.7069
B6.A-Chr12 m 85.225 0.886 86.9681 83.4819
B6.A-Chr13 f 90.0875 0.886 91.8306 88.3444
B6.A-Chr13 m 82.35 0.886 84.0931 80.6069
B6.A-Chr14 f 90.125 0.886 91.8681 88.3819
B6.A-Chr14 m 89.5875 0.886 91.3306 87.8444
B6.A-Chr15 f 89.3333 0.8353 90.9767 87.6899
B6.A-Chr15 m 85.3 0.9472 87.1635 83.4365
B6.A-Chr16 f 89.3375 0.886 91.0806 87.5944
B6.A-Chr16 m 89.6375 0.886 91.3806 87.8944
B6.A-Chr17 f 90.35 0.886 92.0931 88.6069
B6.A-Chr17 m 86.2 0.886 87.9431 84.4569
B6.A-Chr18 f 90.2625 0.886 92.0056 88.5194
B6.A-Chr18 m 88.1 0.886 89.8431 86.3569
B6.A-Chr19 f 90.9125 0.886 92.6556 89.1694
B6.A-Chr19 m 88.7286 0.9472 90.592 86.8651
B6.A-Chr2 f 89.2571 0.9472 91.1206 87.3937
B6.A-Chr2 m 86.4375 0.886 88.1806 84.6944
B6.A-Chr3 f 88.8375 0.886 90.5806 87.0944
B6.A-Chr3 m 87.475 0.886 89.2181 85.7319
B6.A-Chr4 f 86.7375 0.886 88.4806 84.9944
B6.A-Chr4 m 83.1857 0.9472 85.0492 81.3223
B6.A-Chr5 f 87.875 0.886 89.6181 86.1319
B6.A-Chr5 m 89.3125 0.886 91.0556 87.5694
B6.A-Chr6 f 86.45 0.886 88.1931 84.7069
B6.A-Chr6 m 85.8875 0.886 87.6306 84.1444
B6.A-Chr7 f 89.4375 0.886 91.1806 87.6944
B6.A-Chr7 m 86.1625 0.886 87.9056 84.4194
B6.A-Chr8 f 90.675 0.886 92.4181 88.9319
B6.A-Chr8 m 88.3833 0.7234 89.8066 86.9601
B6.A-Chr9 f 87.7625 0.886 89.5056 86.0194
B6.A-Chr9 m 89.775 0.886 91.5181 88.0319
B6.A-ChrX f 89.925 0.886 91.6681 88.1819
B6.A-ChrX m 89.825 0.886 91.5681 88.0819
B6.A-ChrY f 90.9286 0.9472 92.792 89.0651
B6.A-ChrY m 90.6375 0.886 92.3806 88.8944
C57BL/6J f 88.8875 0.886 90.6306 87.1444
C57BL/6J m 87.8 0.886 89.5431 86.0569


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
A/J both 83.3 0.6265 84.5326 82.0674
B6.A-Chr1 both 84.7875 0.6265 86.0201 83.5549
B6.A-Chr10 both 88.3759 0.6485 89.6517 87.1001
B6.A-Chr11 both 88.3562 0.6265 89.5888 87.1237
B6.A-Chr12 both 87.3375 0.6265 88.5701 86.1049
B6.A-Chr13 both 86.2188 0.6265 87.4513 84.9862
B6.A-Chr14 both 89.8562 0.6265 91.0888 88.6237
B6.A-Chr15 both 87.3167 0.6314 88.559 86.0744
B6.A-Chr16 both 89.4875 0.6265 90.7201 88.2549
B6.A-Chr17 both 88.275 0.6265 89.5076 87.0424
B6.A-Chr18 both 89.1812 0.6265 90.4138 87.9487
B6.A-Chr19 both 89.8205 0.6485 91.0964 88.5447
B6.A-Chr2 both 87.8473 0.6485 89.1231 86.5715
B6.A-Chr3 both 88.1562 0.6265 89.3888 86.9237
B6.A-Chr4 both 84.9616 0.6485 86.2374 83.6858
B6.A-Chr5 both 88.5937 0.6265 89.8263 87.3612
B6.A-Chr6 both 86.1687 0.6265 87.4013 84.9362
B6.A-Chr7 both 87.8 0.6265 89.0326 86.5674
B6.A-Chr8 both 89.5292 0.5719 90.6543 88.404
B6.A-Chr9 both 88.7687 0.6265 90.0013 87.5362
B6.A-ChrX both 89.875 0.6265 91.1076 88.6424
B6.A-ChrY both 90.783 0.6485 92.0589 89.5072
C57BL/6J both 88.3438 0.6265 89.5763 87.1112




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA