Phenotype measure:   Metten2   peak_latency

ID, description, units MPD:19506   peak_latency   latency to first handling-induced convulsions score used to calculate peak ethanol   [h]
ethanol study
Data set, strains Metten2   inbred   15 strains     sex: m     age: 8-15wks
Procedure behavior observation
Ontology mappings


  STRAIN COMPARISON PLOT
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Metten2 - latency to first handling-induced convulsions score used to calculate peak ethanol



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested15 strains
Mean of the strain means4.28   h
Median of the strain means3.43   h
SD of the strain means± 2.99
Coefficient of variation (CV)0.697
Min–max range of strain means1.14   –   13.6   h
Mean sample size per strain11.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 14 1116.113 79.7224 8.5021 < 0.0001
Residuals 156 1462.7758 9.3768


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 3.43 2.34   14 0.626 0.684 0.0, 7.0 -0.29
AKR/J m 5.75 2.25   8 0.796 0.392 1.0, 8.0 0.49
BALB/cByJ m 1.14 2.61   7 0.986 2.28 0.0, 7.0 -1.05
BTBR T+ Itpr3tf/J m 5.8 1.79   5 0.8 0.308 3.0, 8.0 0.51
C3H/HeJ m 13.6 10.0   9 3.34 0.739 3.0, 24.0 3.12
C57BL/6J m 4.11 2.18   19 0.501 0.532 1.0, 9.0 -0.06
C57BR/cdJ m 1.94 2.01   18 0.475 1.04 0.0, 8.0 -0.78
C57L/J m 3.35 2.15   17 0.521 0.641 1.0, 9.0 -0.31
CBA/J m 2.89 1.71   18 0.403 0.592 0.0, 8.0 -0.47
CE/J m 6.75 1.89   4 0.946 0.28 4.0, 8.0 0.83
DBA/1J m 2.5 2.38   4 1.19 0.952 1.0, 6.0 -0.6
DBA/2J m 3.75 2.38   12 0.687 0.634 1.0, 8.0 -0.18
FVB/NJ m 2.44 1.71   16 0.428 0.702 0.0, 6.0 -0.62
PL/J m 3.0 1.5   9 0.5 0.5 1.0, 6.0 -0.43
SJL/J m 3.82 2.64   11 0.796 0.691 0.0, 8.0 -0.16


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 3.4286 0.8184 5.0451 1.812
AKR/J m 5.75 1.0826 7.8885 3.6115
BALB/cByJ m 1.1429 1.1574 3.429 0.0
BTBR T+ Itpr3tf/J m 5.8 1.3694 8.505 3.095
C3H/HeJ m 13.5556 1.0207 15.5718 11.5393
C57BL/6J m 4.1053 0.7025 5.4929 2.7176
C57BR/cdJ m 1.9444 0.7218 3.3701 0.5188
C57L/J m 3.3529 0.7427 4.8199 1.8859
CBA/J m 2.8889 0.7218 4.3146 1.4632
CE/J m 6.75 1.5311 9.7743 3.7257
DBA/1J m 2.5 1.5311 5.5243 0.0
DBA/2J m 3.75 0.884 5.4961 2.0039
FVB/NJ m 2.4375 0.7655 3.9497 0.9253
PL/J m 3.0 1.0207 5.0162 0.9838
SJL/J m 3.8182 0.9233 5.6419 1.9945




  GENOME-WIDE ASSOCIATION (GWAS) STATIC PLOT
Plot generated with EMMA / pyLMM using 132K SNP array. Click on plot to view at larger size.