Phenotype measure:   Metten2   peak_EtOHadj

ID, description, units MPD:19505   peak_EtOHadj   peak handling-induced convulsion (HIC) score   [score]  ethanol normalized to controls
ethanol study
Data set, strains Metten2   inbred   15 strains     sex: m     age: 8-15wks
Procedure behavior observation
Ontology mappings

  STRAIN COMPARISON PLOT
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Metten2 - peak handling-induced convulsion (HIC) score ethanol normalized to controls



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested15 strains
Mean of the strain means2.45   score
Median of the strain means2.36   score
SD of the strain means± 0.912
Coefficient of variation (CV)0.373
Min–max range of strain means0.237   –   3.81   score
Mean sample size per strain11.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 14 104.5694 7.4692 20.0673 < 0.0001
Residuals 156 58.0648 0.3722


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 2.36 0.355   14 0.0949 0.151 1.93, 2.93 -0.09
AKR/J m 3.5 0.616   8 0.218 0.176 2.29, 4.29 1.16
BALB/cByJ m 0.237 0.125   7 0.0471 0.526 0.19, 0.52 -2.42
BTBR T+ Itpr3tf/J m 3.07 0.65   5 0.291 0.212 2.2, 3.87 0.69
C3H/HeJ m 3.81 1.12   9 0.373 0.294 1.44, 5.44 1.5
C57BL/6J m 2.19 0.963   19 0.221 0.44 0.22, 3.56 -0.28
C57BR/cdJ m 2.32 0.0778   18 0.0183 0.0336 2.3, 2.63 -0.14
C57L/J m 3.49 0.688   17 0.167 0.197 0.96, 3.96 1.15
CBA/J m 1.68 0.695   18 0.164 0.414 0.23, 2.23 -0.84
CE/J m 3.06 0.999   4 0.5 0.327 1.89, 3.89 0.67
DBA/1J m 1.69 0.165   4 0.0825 0.0975 1.61, 1.94 -0.83
DBA/2J m 2.78 0.291   12 0.0839 0.104 2.53, 3.2 0.37
FVB/NJ m 2.11 0.182   16 0.0454 0.086 2.05, 2.72 -0.37
PL/J m 2.6 0.704   9 0.235 0.271 1.19, 3.19 0.17
SJL/J m 1.78 0.301   11 0.0909 0.169 1.21, 2.21 -0.73


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 2.3557 0.1631 2.6778 2.0336
AKR/J m 3.5025 0.2157 3.9286 3.0764
BALB/cByJ m 0.2371 0.2306 0.6926 0.0
BTBR T+ Itpr3tf/J m 3.068 0.2728 3.6069 2.5291
C3H/HeJ m 3.8111 0.2034 4.2128 3.4094
C57BL/6J m 2.1884 0.14 2.4649 1.912
C57BR/cdJ m 2.3183 0.1438 2.6024 2.0343
C57L/J m 3.4918 0.148 3.784 3.1995
CBA/J m 1.6767 0.1438 1.9607 1.3926
CE/J m 3.0575 0.305 3.6601 2.4549
DBA/1J m 1.6925 0.305 2.2951 1.0899
DBA/2J m 2.7825 0.1761 3.1304 2.4346
FVB/NJ m 2.1125 0.1525 2.4138 1.8112
PL/J m 2.5956 0.2034 2.9973 2.1939
SJL/J m 1.7818 0.1839 2.1452 1.4185




  GWAS USING LINEAR MIXED MODELS