Phenotype measure:   Metten2   peak_EtOH

ID, description, units MPD:19504   peak_EtOH   peak handling-induced convulsion (HIC) score   [score]  ethanol
ethanol study
Data set, strains Metten2   inbred   15 strains     sex: m     age: 8-15wks
Procedure behavior observation
Ontology mappings

  STRAIN COMPARISON PLOT
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Metten2 - peak handling-induced convulsion (HIC) score ethanol



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested15 strains
Mean of the strain means3.82   score
Median of the strain means3.88   score
SD of the strain means± 0.507
Coefficient of variation (CV)0.133
Min–max range of strain means2.63   –   4.58   score
Mean sample size per strain11.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 14 49.073 3.5052 9.4211 < 0.0001
Residuals 156 58.0413 0.3721


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 4.43 0.357   14 0.0955 0.0807 4.0, 5.0 1.21
AKR/J m 3.88 0.615   8 0.218 0.159 2.67, 4.67 0.12
BALB/cByJ m 4.05 0.125   7 0.0471 0.0308 4.0, 4.33 0.46
BTBR T+ Itpr3tf/J m 3.53 0.648   5 0.29 0.184 2.67, 4.33 -0.57
C3H/HeJ m 3.87 1.12   9 0.374 0.29 1.5, 5.5 0.1
C57BL/6J m 2.63 0.962   19 0.221 0.366 0.67, 4.0 -2.34
C57BR/cdJ m 4.02 0.0778   18 0.0183 0.0194 4.0, 4.33 0.4
C57L/J m 3.86 0.688   17 0.167 0.178 1.33, 4.33 0.08
CBA/J m 3.44 0.695   18 0.164 0.202 2.0, 4.0 -0.74
CE/J m 3.17 0.999   4 0.5 0.316 2.0, 4.0 -1.28
DBA/1J m 4.08 0.165   4 0.0825 0.0404 4.0, 4.33 0.52
DBA/2J m 4.25 0.29   12 0.0836 0.0682 4.0, 4.67 0.85
FVB/NJ m 4.06 0.182   16 0.0454 0.0447 4.0, 4.67 0.48
PL/J m 3.41 0.702   9 0.234 0.206 2.0, 4.0 -0.8
SJL/J m 4.58 0.303   11 0.0913 0.0662 4.0, 5.0 1.5


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 4.4286 0.163 4.7506 4.1066
AKR/J m 3.875 0.2157 4.301 3.449
BALB/cByJ m 4.0471 0.2305 4.5025 3.5917
BTBR T+ Itpr3tf/J m 3.532 0.2728 4.0708 2.9932
C3H/HeJ m 3.87 0.2033 4.2716 3.4684
C57BL/6J m 2.6305 0.1399 2.9069 2.3541
C57BR/cdJ m 4.0183 0.1438 4.3023 3.7343
C57L/J m 3.8618 0.1479 4.154 3.5695
CBA/J m 3.4439 0.1438 3.7279 3.1599
CE/J m 3.1675 0.305 3.7699 2.5651
DBA/1J m 4.0825 0.305 4.6849 3.4801
DBA/2J m 4.25 0.1761 4.5978 3.9022
FVB/NJ m 4.0625 0.1525 4.3637 3.7613
PL/J m 3.4067 0.2033 3.8083 3.005
SJL/J m 4.5764 0.1839 4.9396 4.2131




  GWAS USING LINEAR MIXED MODELS