Phenotype measure:   Metten2   peak_CTRL

ID, description, units MPD:19503   peak_CTRL   peak handling-induced convulsion (HIC) score   [score]  control
ethanol study
Data set, strains Metten2   inbred   15 strains     sex: m     age: 8-15wks
Procedure behavior observation
Ontology mappings

  STRAIN COMPARISON PLOT
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Metten2 - peak handling-induced convulsion (HIC) score control



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested15 strains
Mean of the strain means1.37   score
Median of the strain means1.47   score
SD of the strain means± 1.11
Coefficient of variation (CV)0.812
Min–max range of strain means0.0556   –   3.81   score
Mean sample size per strain8.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 14 143.8499 10.275 16.5769 < 0.0001
Residuals 114 70.6615 0.6198


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 2.07 0.683   9 0.228 0.329 1.0, 3.33 0.63
AKR/J m 0.375 0.577   8 0.204 1.54 -0.89
BALB/cByJ m 3.81 0.377   9 0.126 0.0989 3.0, 4.0 2.19
BTBR T+ Itpr3tf/J m 0.468 0.448   5 0.2 0.957 -0.81
C3H/HeJ m 0.0556 0.167   9 0.0556 3.0 -1.18
C57BL/6J m 0.444 0.441   9 0.147 0.992 -0.83
C57BR/cdJ m 1.7 1.53   9 0.511 0.9 0.29
C57L/J m 0.37 0.423   9 0.141 1.14 -0.9
CBA/J m 1.77 0.609   10 0.193 0.345 0.67, 2.67 0.36
CE/J m 0.11 0.17   6 0.0696 1.55 -1.13
DBA/1J m 2.39 0.645   6 0.263 0.27 1.67, 3.33 0.91
DBA/2J m 1.47 1.16   10 0.366 0.788 0.09
FVB/NJ m 1.95 1.1   13 0.304 0.562 0.52
PL/J m 0.816 0.767   9 0.256 0.941 -0.5
SJL/J m 2.79 0.753   8 0.266 0.27 1.67, 4.0 1.27


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 2.0733 0.2624 2.5932 1.5535
AKR/J m 0.375 0.2784 0.9264 0.0
BALB/cByJ m 3.8144 0.2624 4.3343 3.2946
BTBR T+ Itpr3tf/J m 0.468 0.3521 1.1655 0.0
C3H/HeJ m 0.0556 0.2624 0.5754 0.0
C57BL/6J m 0.4444 0.2624 0.9643 0.0
C57BR/cdJ m 1.7033 0.2624 2.2232 1.1835
C57L/J m 0.37 0.2624 0.8899 0.0
CBA/J m 1.767 0.249 2.2602 1.2738
CE/J m 0.11 0.3214 0.7467 0.0
DBA/1J m 2.39 0.3214 3.0267 1.7533
DBA/2J m 1.467 0.249 1.9602 0.9738
FVB/NJ m 1.95 0.2184 2.3826 1.5174
PL/J m 0.8156 0.2624 1.3354 0.2957
SJL/J m 2.7925 0.2784 3.3439 2.2411




  GWAS USING LINEAR MIXED MODELS